Contig 007847:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018H06Sequence598007847 (2)ref|XP_009608557.1|242PREDICTED: uncharacterized protein LOC104102531 [Nicotiana tomentosiformis]708007847 (2)ref|XP_009608557.1|290PREDICTED: uncharacterized protein LOC104102531 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF018H06- AAATACATGACTGGAGTAT
                      ____________________________________________________________
consensus AAATACATGACTGGAGTAT
 
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rJMSF018H06- GATTCACTATAATTAAGCATTTTTTTAAGGGGCATAATGGACAAAATTTCAGGCACTGCC
                      ____________________________________________________________
consensus GATTCACTATAATTAAGCATTTTTTTAAGGGGCATAATGGACAAAATTTCAGGCACTGCC
 
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rJMSF018H06- AACACAGATACATCAGTAGTAGCGCGACCCCGACCCGGGGTCGTAACCACGGCCCCCGGG
                      ____________________________________________________________
consensus AACACAGATACATCAGTAGTAGCGCGACCCCGACCCGGGGTCGTAACCACGGCCCCCGGG
 
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rJMSF018H06- GTACTGAGCTCTAGGTTCATACCCTTGATCTCTTCCGCTTCCAACAAACCGGTTTCGGTC
                      ____________________________________________________________
consensus GTACTGAGCTCTAGGTTCATACCCTTGATCTCTTCCGCTTCCAACAAACCGGTTTCGGTC
 
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rJMSF018H06- TCTGTACGAATCATAATTATTGGCATTATAGGCTCGTTGTCGCTCCCCAGGCACGGGAGT
                      ____________________________________________________________
consensus TCTGTACGAATCATAATTATTGGCATTATAGGCTCGTTGTCGCTCCCCAGGCACGGGAGT
 
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rJMSF018H06- TGGTGCAGCGTATCCACGAGGATCAATAGGGCCTCCTGCATTAGTGTTTGGATGGTTATC
                      ____________________________________________________________
consensus TGGTGCAGCGTATCCACGAGGATCAATAGGGCCTCCTGCATTAGTGTTTGGATGGTTATC
 
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rJMSF018H06- CAATGCAACCTGTTGGTACTGCTGACGCCTCGCATGGGATTCCCGGCGAAGAAAATCCTC
JMSF018H06+ ATGCAACCTGTTGGTACTGCTGACGCCTCGCATGGGATTCCCGGCGAAGAAAATCCTC
                      ____________________________________________________________
consensus CAATGCAACCTGTTGGTACTGCTGACGCCTCGCATGGGATTCCCGGCGAAGAAAATCCTC
 
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rJMSF018H06- TCTGCGACTCGCATGCCGGGCTCTTAGGGCTACTAGCTGCTCTTGGTACTGAGCATTGAT
JMSF018H06+ TCTGCGACTCGCATGCCGGGCTCTTAGGGCTACTAGCTGCTCTTGGTACTGAGCATTGAT
                      ____________________________________________________________
consensus TCTGCGACTCGCATGCCGGGCTCTTAGGGCTACTAGCTGCTCTTGGTACTGAGCATTGAT
 
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rJMSF018H06- TGCATTTATTCGCTCCCTATGCCTAGCATTTTCGGCATCCTCTGCGTCATTTTGTTCCTT
JMSF018H06+ TGCATTTATTCGCTCCCTATGCCTAGCATTTTCGGCATCCTCTGCGTCATTTTGTTCCTT
                      ____________________________________________________________
consensus TGCATTTATTCGCTCCCTATGCCTAGCATTTTCGGCATCCTCTGCGTCATTTTGTTCCTT
 
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rJMSF018H06- GCTCAGCTTCATGATGTCATCGAGGAACTTCTGTTCAAGGCCCTCCAGAGACTGTGGCAT
JMSF018H06+ GCTCAGCTTCATGATGTCATCGAGGAACTTCTGTTCAAGGCCCTCCAGAGACTGTGGCAT
                      ____________________________________________________________
consensus GCTCAGCTTCATGATGTCATCGAGGAACTTCTGTTCAAGGCCCTCCAGAGACTGTGGCAT
 
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rJMSF018H06- GGGATTATCTTCATAACCAATATCCATATCTTCTTCTATTGGCTGAGATCCGTGATCTTT
JMSF018H06+ GGGATTATCTTCATAACCAATATCCATATCTTCTTCTATTGGCTGAGATCCGTGATCTTT
                      ____________________________________________________________
consensus GGGATTATCTTCATAACCAATATCCATATCTTCTTCTATTGGCTGAGATCCGTGATCTTT
 
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rJMSF018H06- GCCACCTTGGTTCTCTAATGGCATCCTTGGATCTGTCCTCTGGCCCTGATAATAGGATCT
JMSF018H06+ GCCACCTTGGTTCTCTAATGGCATCCTTGGATCTGTCCTCTGGCCCTGATAATAGGATCT
                      ____________________________________________________________
consensus GCCACCTTGGTTCTCTAATGGCATCCTTGGATCTGTCCTCTGGCCCTGATAATAGGATCT
 
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rJMSF018H06- TGATGCTTCGGCTCCCTGACCTTCA
JMSF018H06+ TGATGCTTCGGCTCCCTGACCTTCAGAGAACATGTGGGGAGACATAGCGTTGGTGGGCAG
                      ____________________________________________________________
consensus TGATGCTTCGGCTCCCTGACCTTCAGAGAACATGTGGGGAGACATAGCGTTGGTGGGCAG
 
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JMSF018H06+ TTTGGGGCTCTCTCGTTCCCATCTCCATTGCTGCTGTTGCTGCTGATGTTCTTCAGACCT
                      ____________________________________________________________
consensus TTTGGGGCTCTCTCGTTCCCATCTCCATTGCTGCTGTTGCTGCTGATGTTCTTCAGACCT
 
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JMSF018H06+ GGCGTGTTGGGGGTGATGTTGAATCTGGGAATATGCGTTATTGGCGGTGGAATCTCCGGC
                      ____________________________________________________________
consensus GGCGTGTTGGGGGTGATGTTGAATCTGGGAATATGCGTTATTGGCGGTGGAATCTCCGGC
 
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JMSF018H06+ GCCGCCGTAATGCCCCCCTCCCCGTCTCATCCTCTACACAAGCCTATGCACTTCAACACC
                      ____________________________________________________________
consensus GCCGCCGTAATGCCCCCCTCCCCGTCTCATCCTCTACACAAGCCTATGCACTTCAACACC