Contig 007845:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007O17Sequence319007845 (6)ref|XP_009772105.1|1e-41PREDICTED: glucuronokinase 1-like [Nicotiana sylvestris]758007845 (6)ref|XP_004231840.1|2e-136PREDICTED: glucuronokinase 1 [Solanum lycopersicum]
JMSF018D12Sequence556007845 (6)emb|CDP04117.1|1e-83unnamed protein product [Coffea canephora]791007845 (6)ref|XP_004231840.1|5e-106PREDICTED: glucuronokinase 1 [Solanum lycopersicum]
JMSF042E21Sequence776007845 (6)emb|CDP04117.1|7e-149unnamed protein product [Coffea canephora]734007845 (6)ref|XP_004231840.1|2e-126PREDICTED: glucuronokinase 1 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF018D12-                                        ATAGTTGCACACAAATTAAACAAGACAGAC
                      ____________________________________________________________
consensus                                           ATAGTTGCACACAAATTAAACAAGACAGAC
 
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rJMSF018D12-          ACATCACACATGGGAATAAACGAAATTTTGTACTATCAATAAGGCTCAATTGTTAAACTT
                      ____________________________________________________________
consensus             ACATCACACATGGGAATAAACGAAATTTTGTACTATCAATAAGGCTCAATTGTTAAACTT
 
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rJMSF018D12-          GCTTCCATGTGCTTTATTCTGTGGGGCATAAAATATTAAGAAATGATGAAGGATATCAAC
rJMSF042E21-                  GTGCTTTATTCTGTGGGGCATAAAATATTAAGAAATGATGAAGGATATCAAC
rJMSF007O17-                  GTGCTTTATTCTGTGGGGCATAAAATATTAAGAAATGATGAAGGATATCAAC
                      ____________________________________________________________
consensus             GCTTCCATGTGCTTTATTCTGTGGGGCATAAAATATTAAGAAATGATGAAGGATATCAAC
 
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rJMSF018D12-          CATCTGAGAAAACTTATTTAGATTGCAGAATTTGAAGATCAGTATCATTCAGGAATGAAG
rJMSF042E21-          CATCTGAGAAAACTTATTTAGATTGCAGAATTTGAAGATCAGTATCATTCAGGAATGAAG
rJMSF007O17-          CATCTGAGAAAACTTATTTAGATTGCAGAATTTGAAGATCAGTATCATTCAGGAATGAAG
                      ____________________________________________________________
consensus             CATCTGAGAAAACTTATTTAGATTGCAGAATTTGAAGATCAGTATCATTCAGGAATGAAG
 
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rJMSF018D12-          GCATGACTTTAATGGGTTGAATGATAAAACCAGCTTTCTGGCAATCTTCCTCGAGTTTCT
rJMSF042E21-          GCATGACTTTAATGGGTTGAATGATAAAACCAGCTTTCTGGCAATCTTCCTCGAGTTTCT
rJMSF007O17-          GCATGACTTTAATGGGTTGAATGATAAAACCAGCTTTCTGGCAATCTTCCTCGAGTTTCT
                      ____________________________________________________________
consensus             GCATGACTTTAATGGGTTGAATGATAAAACCAGCTTTCTGGCAATCTTCCTCGAGTTTCT
 
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rJMSF018D12-          TCACTTGGGATGGACCGTCAGGACAGAATGCAACTACGGCACCTCCACTTCCTGTAAATT
rJMSF042E21-          TCACTTGGGATGGACCGTCAGGACAGAATGCAACTACGGCACCTCCACTTCCTGTAAATT
rJMSF007O17-          TCACTTGGGATGGACCGTCAGGACAGAATGCAACTACGGCACCTCCACTTCCTGTAAATT
                      ____________________________________________________________
consensus             TCACTTGGGATGGACCGTCAGGACAGAATGCAACTACGGCACCTCCACTTCCTGTAAATT
 
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rJMSF018D12-          TTGACGCTGCACCCACTCTTCGGGCCACTTCAACCATCTCTATGTTCAAGGCACCAAGAC
rJMSF042E21-          TTGACGCTGCACCCACTCTTCGGGCCACTTCAACCATCTCTATGTTCAAGGCACCAAGAC
rJMSF007O17-          TTGACGCTGCACCCACTCTTCGGGCCACTTCAACCATCTCTATGTTCAAGGCACCAAGAC
                      ____________________________________________________________
consensus             TTGACGCTGCACCCACTCTTCGGGCCACTTCAACCATCTCTATGTTCAAGGCACCAAGAC
 
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rJMSF018D12-          ACTCGTCCCCGAACATTTGCCTTCGTAGGTCAAAATTCCGATTCATGAGCTCTGCAAACG
rJMSF042E21-          ACTCGTCCCCGAACATTTGCCTTCGTAGGTCAAAATTCCGATTCATGAGCTCTGCAAACG
rJMSF007O17-          ACTCGTCCCCGAACATTTGCCTTCGTAGGTCAAAATTCCGATTCATGAGCTCTGCAAACG
                      ____________________________________________________________
consensus             ACTCGTCCCCGAACATTTGCCTTCGTAGGTCAAAATTCCGATTCATGAGCTCTGCAAACG
 
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rJMSF018D12-          TGACATAGTCTTTCCCAAGTAATGCTTTTTGTCCTTGCACAGCTAGTTTTGCAACCTCTT
rJMSF042E21-          TGACATAGTCTTTCCCAAGTAATGCTTTTTGTCCTTGCACAGCTAGTTTTGCAACCTCTT
rJMSF007O17-          TGACATAGTCTTTCCCAAGTAATGCTTTTTGTCCTTGCACAGCTAGTTTTGCAACCTCTT
                      ____________________________________________________________
consensus             TGACATAGTCTTTCCCAAGTAATGCTTTTTGTCCTTGCACAGCTAGTTTTGCAACCTCTT
 
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rJMSF018D12-          CCATTGATGATATTATGAACTTATCATCATCTAACCACCTCTGACGAACTGTACTGTGGA
rJMSF042E21-          CCATTGACGATATTATGAACTTATCATCATCTAACCACCTCTGACGAACTGTACTGTGGA
rJMSF007O17-          CCATTGACGATATTATGAACTTATCATCATCTAACCACCTCTGACGAACTGTACTGTGGA
JMSF042E21+              TTGACGATATTATGAACTTATCATCATCTAACCACCTCTGACGAACTGTACTGTGGA
                      ____________________________________________________________
consensus             CCATTGACGATATTATGAACTTATCATCATCTAACCACCTCTGACGAACTGTACTGTGGA
 
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rJMSF018D12-          CCTTTCCAGAATCACTGGGATTCTCAGCATAGATTAGATGCAAAGGGGGGAGAAGATCAA
rJMSF042E21-          CCTTTCCAGAATCACTGGGATTCTCAGCATAGATTAGATGCAAAGGGGGGAGAAGATCAA
rJMSF007O17-          CCTTTCCAGAATCACTGGGATTCTCAGCATAGATTAGATGCAAAGGGGGGAGAAGATCAA
JMSF042E21+           CCTTTCCAGAATCACTGGGATTCTCAGCATAGATTAGATGCAAAGGGGGGAGAAGATCAA
                      ____________________________________________________________
consensus             CCTTTCCAGAATCACTGGGATTCTCAGCATAGATTAGATGCAAAGGGGGGAGAAGATCAA
 
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rJMSF018D12-          TATCCATGGGTGTATATATTCCATGACCTAACGCATCCATATGCTTCTTGCCAAAATCCA
rJMSF042E21-          TATCCATGGGTGTATATATTCCATGACCTAACGCATCCATATGCTTCTTGCCAAAATCCA
rJMSF007O17-          TATCCATGGGTGTATATATTCCATGACCTAACGCATCCATATGCTTCTTGCCAAAATCCA
JMSF042E21+           TATCCATGGGTGTATATATTCCATGACCTAACGCATCCATATGCTTCTTGCCAAAATCCA
                      ____________________________________________________________
consensus             TATCCATGGGTGTATATATTCCATGACCTAACGCATCCATATGCTTCTTGCCAAAATCCA
 
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rJMSF018D12-          TGTATACGACACCGCCATAGACCTGTGCCACCCTATCTTTGCAAACNAGCCACAATCCCG
rJMSF042E21-          TGTATACGACACCGCCATAGACCTGTGCCACCCTATC-TTGCAAACCAGCCACAATCCCG
rJMSF007O17-          TGTATACGACACCGCCATAGACCTGTGCCACCCTATC-TTGCAAACCAGCCACAATCCCG
JMSF042E21+           TGTATACGACACCGCCATAGACCTGTGCCACCCTATC-TTGCAAACCAGCCACAATCCCG
                      ____________________________________________________________
consensus             TGTATACGACACCGCCATAGACCTGTGCCACCCTATC-TTGCAAACCAGCCACAATCCCG
 
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rJMSF018D12-          AGTTCCTTCTCTGCATGGAGNATAAGGTTGGGTCTGACCTC                   
rJMSF042E21-          AGTTCCTTCTCTGCATTGAGGATAAGGTTTGGTCTGACCTCAACTTTAATCAGATGCCTA
rJMSF007O17-          AGTTCCTTCTCTGCATTGAGGATAAGGTTTGGTCTGACCTCAACTTTAATCAGATGCCTA
JMSF042E21+           AGTTCCTTCTCTGCATTGAGGATAAGGTTTGGTCTGACCTCAACTTTAATCAGATGCCTA
JMSF018D12+                                                       TTTAATCAGATGCCTA
                      ____________________________________________________________
consensus             AGTTCCTTCTCTGCATTGAGGATAAGGTTTGGTCTGACCTCAACTTTAATCAGATGCCTA
 
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rJMSF042E21-          ACGTTGT                                                     
rJMSF007O17-          ACGTTGTAAAAGTCGAGGAGGCAACTTAATGCAGCACATACAATAGC             
JMSF042E21+           ACGTTGTAAAAGTCGAGGAGGCAACTTAATGCAGCACATACAATAGCACTAGAGCCCGAA
JMSF018D12+           ACGTTGTAAAAGTCGAGGAGGCAACTTAATGCAGCACATACAATAGCACTAGAGCCCGAA
                      ____________________________________________________________
consensus             ACGTTGTAAAAGTCGAGGAGGCAACTTAATGCAGCACATACAATAGCACTAGAGCCCGAA
 
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JMSF042E21+           AGACCTGTCTGGCGGGGGATGTTAGTATCATATGAAAGCTTGAAATTTCTTTCATGTAGA
JMSF018D12+           AGACCTGTCTGGCGGGGGATGTTAGTATCATATGAAAGCTTGAAATTTCTTTCATGTAGA
                      ____________________________________________________________
consensus             AGACCTGTCTGGCGGGGGATGTTAGTATCATATGAAAGCTTGAAATTTCTTTCATGTAGA
 
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JMSF042E21+           CTGATGTTATTATCCTTGCAGTAATTGTGAAACACCTTACAAATTGCCATAAGCAATCGC
JMSF007O17+                                                    AATTGCCATAAGCAATCGC
JMSF018D12+           CTGATGTTATTATCCTTGCAGTAATTGTGAAACACCTTACAAATTGCCATAAGCAATCGC
                      ____________________________________________________________
consensus             CTGATGTTATTATCCTTGCAGTAATTGTGAAACACCTTACAAATTGCCATAAGCAATCGC
 
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JMSF042E21+           ACACCTCCATAATAACCTTCACTTTGCAAACGGTTCACCAGATTGGATAGGGAATTGAAG
JMSF007O17+           ACACCTCCATAATAACCTTCACTTTGCAAACGGTTCACCAGATTGGATAGGGAATTGAAG
JMSF018D12+           ACACCTCCATAATAACCTTCACTTTGCAAACGGTTCACCAGATTGGATAGGGAATTGAAG
                      ____________________________________________________________
consensus             ACACCTCCATAATAACCTTCACTTTGCAAACGGTTCACCAGATTGGATAGGGAATTGAAG
 
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JMSF042E21+           TGGACGTGATCGTGAGTAGGATGGGGGGAGATGAACAGATCCGGCGAAGGCTCCAAACGC
JMSF007O17+           TGGACGTGATCGTGAGTAGGATGGGGGGAGATGAACAGATCCGGCGAAGGCTCCAAACGC
JMSF018D12+           TGGACGTGATCGTGAGTAGGATGGGGGGAGATGAACAGATCCGGCGAAGGCTCCAAACGC
                      ____________________________________________________________
consensus             TGGACGTGATCGTGAGTAGGATGGGGGGAGATGAACAGATCCGGCGAAGGCTCCAAACGC
 
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JMSF042E21+           ACGGAAGCCCAGAAGTTGCCGAGGCTGAAAGATATGGCGTTGCCGTAATACACATCGCTG
JMSF007O17+           ACGGAAGCCCAGAAGTTGCCGAGGCTGAAAGATATGGCGTTGCCGTAATACACATCGCTG
JMSF018D12+           ACGGAAGCCCAGAAGTTGCCGAGGCTGAAAGATATGGCGTTGCCGTAATACACATCGCTG
                      ____________________________________________________________
consensus             ACGGAAGCCCAGAAGTTGCCGAGGCTGAAAGATATGGCGTTGCCGTAATACACATCGCTG
 
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JMSF042E21+           GGGTTCCCCAACAGACCCACCCTCGCGTACGCCTTGTGTTCGATCACTTCACTATTGCCA
JMSF007O17+           GGGTTCCCCAACAGACCCACCCTCGCGTACGCCTTGTGTTCGATCACTTCACTATTGCCA
JMSF018D12+           GGGTTCCCCAACAGACCCACCCTCGCGTACGCCTTGTGTTCGATCACTTCACTATTGCCA
                      ____________________________________________________________
consensus             GGGTTCCCCAACAGACCCACCCTCGCGTACGCCTTGTGTTCGATCACTTCACTATTGCCA
 
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JMSF042E21+           CTCTCCATTACTGCTCAATTGCTTACTCTCCACTGCTGCACACCAAATTGAACACTGTC 
JMSF007O17+           CTCTCCATTACTGCTCAATTGCTTACTCTCCACTGCTGCACACCAAATTGAACACTGTC 
JMSF018D12+           CTCTCCATTACTGCTCAATTGCTTGCTCTCCACTGCTGCACACCAAATTGAACACTGTCA
                      ____________________________________________________________
consensus             CTCTCCATTACTGCTCAATTGCTTACTCTCCACTGCTGCACACCAAATTGAACACTGTCA
 
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JMSF018D12+           AATGATTCAACTCAACTTTATCCTTTATATATATACTGAAAGATTGCTTTACTTAAGTTC
                      ____________________________________________________________
consensus             AATGATTCAACTCAACTTTATCCTTTATATATATACTGAAAGATTGCTTTACTTAAGTTC