Contig 007841:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS052D03Sequence572007841 (2)ref|XP_009796185.1|4e-74PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Nicotiana syl
JMSF017L15Sequence461007841 (2)ref|XP_009796185.1|1e-54PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Nicotiana syl574015010ref|XP_009796198.1|1e-77PREDICTED: rhodanese-like domain-containing protein 6 isoform X2 [Nicotiana syl

Alignment

This contig is upended


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JMFS052D03+                          CTCATATAAATTCCTTGCATCTAACAGGACTGTTCTGTTTTCCCT
                      ____________________________________________________________
consensus                            CTCATATAAATTCCTTGCATCTAACAGGACTGTTCTGTTTTCCCT
 
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JMFS052D03+           TTCATCCTGTATGTTGCCCGCATCACTAAGCACAGAATGGAATTCAACTGCAGATAGATG
                      ____________________________________________________________
consensus             TTCATCCTGTATGTTGCCCGCATCACTAAGCACAGAATGGAATTCAACTGCAGATAGATG
 
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JMFS052D03+           TCTTCCAGCATCTGAAACTTCTGCAGACTTTGGCAGCGTAAAAGAACTCAAAGTGACCAA
JMSF017L15+                              TCTGCAGACTTTGGCAGCGGAAAAGAACTCAAAGTGACCAA
                      ____________________________________________________________
consensus             TCTTCCAGCATCTGAAACTTCTGCAGACTTTGGCAGCGTAAAAGAACTCAAAGTGACCAA
 
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JMFS052D03+           TTCCTTAACAATGCGGATGGATAGAGAAGTGAATCCACATTCTTTAGCAACCCTATCATC
JMSF017L15+           TTCCTTAACAATGCGGATGGATAGAGAAGTGAATCCACATTCTTTAGCAACCCTATCATC
                      ____________________________________________________________
consensus             TTCCTTAACAATGCGGATGGATAGAGAAGTGAATCCACATTCTTTAGCAACCCTATCATC
 
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JMFS052D03+           CAAAGGTTCGTGAGAAGATGCAAGCTTGAAATCTGTCCCTTCAAACAAACTATTCAGCTT
JMSF017L15+           CAAAGGTTCGTGAGAAGATGCAAGCTTGAAATCTGTCCCTTCAAACAAACTATTCAGCTT
                      ____________________________________________________________
consensus             CAAAGGTTCGTGAGAAGATGCAAGCTTGAAATCTGTCCCTTCAAACAAACTATTCAGCTT
 
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JMFS052D03+           CACTGCAGAAATATGCTCCTCTAAAGCACACAACTTCCCCCCAACGGTAACATTGACGCC
JMSF017L15+           CACTGCAGAAATATGCTCCTNTAAAGCACACAACTTCCCCCCAACGGTAACATTGACGCC
                      ____________________________________________________________
consensus             CACTGCAGAAATATGCTCCTCTAAAGCACACAACTTCCCCCCAACGGTAACATTGACGCC
 
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JMFS052D03+           GTAGGGAGAGAGGCGGACGCGGCCAACGAGGGAGAGAGAGGNGCAGTTGGATCTGTAGAA
JMSF017L15+           GTAGGGAGAGAGGCGGACGCGGCCAACGAGGGAGAGAGAGGTGCAGTTGGATCTGTAGAA
                      ____________________________________________________________
consensus             GTAGGGAGAGAGGCGGACGCGGCCAACGAGGGAGAGAGAGGTGCAGTTGGATCTGTAGAA
 
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JMFS052D03+           ATTGAGGAGTTGTTGGAGGTCTGGGATGGTAGCGTATTTGTAGTACAATAGAACGCCGTA
JMSF017L15+           ATTGAGGAGTTGTTGGAGGTCGGGGATGGTAGCGTATTTGTAGTACAATAGAACGCCGTA
                      ____________________________________________________________
consensus             ATTGAGGAGTTGTTGGAGGTCTGGGATGGTAGCGTATTTGTAGTACAATAGAACGCCGTA
 
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JMFS052D03+           ACCTTCTCCTCCATCTCGTTGTGGCTGCTCGATTCCTAGGGTCGCCATTGATGATGGTCA
JMSF017L15+           ACCTTCTCCTCCATCTCGTTGTGGCTGCTCGATTCCTAGGGTCGCCATTGATGATGGTCA
                      ____________________________________________________________
consensus             ACCTTCTCCTCCATCTCGTTGTGGCTGCTCGATTCCTAGGGTCGCCATTGATGATGGTCA
 
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JMFS052D03+           AGGTCACTGAGTCA-CTGCATGCGCTGAGTGAGAAGTAAGATGGC               
JMSF017L15+           AGGTCACTGAGTCATCTGCATGCGCTGAGTGAGAAGGAAGATGGCAGGGCAGCATTCCCC
                      ____________________________________________________________
consensus             AGGTCACTGAGTCATCTGCATGCGCTGAGTGAGAAGTAAGATGGCAGGGCAGCATTCCCC