Contig 007840:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017F10Sequence245007840 (2)ref|XP_009799148.1|8e-13PREDICTED: MATE efflux family protein 6-like [Nicotiana sylvestris]778009990 (2)ref|XP_009799149.1|3e-100PREDICTED: MATE efflux family protein 6-like [Nicotiana sylvestris]
JMSF027D05Sequence601007840 (2)ref|XP_009799148.1|2e-80PREDICTED: MATE efflux family protein 6-like [Nicotiana sylvestris]730009990 (2)ref|XP_009799149.1|4e-82PREDICTED: MATE efflux family protein 6-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF027D05+                                                   CGGTGACCACCAAAGGGAAG
                      ____________________________________________________________
consensus                                                     CGGTGACCACCAAAGGGAAG
 
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JMSF027D05+           ACATTGTTTTGGGCTTGCAGAAACCGAATGTAACACTGAAGAAGAGCATAGGGAAACAGG
                      ____________________________________________________________
consensus             ACATTGTTTTGGGCTTGCAGAAACCGAATGTAACACTGAAGAAGAGCATAGGGAAACAGG
 
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JMSF027D05+           CCTGGGATCAGAAACGAGGCGTAGTTTCCTGCTTCGGCTGATATCTCAGGATCCTGTCCC
                      ____________________________________________________________
consensus             CCTGGGATCAGAAACGAGGCGTAGTTTCCTGCTTCGGCTGATATCTCAGGATCCTGTCCC
 
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JMSF027D05+           ATAAACACGAGAATAGACCCTGTGTTGGCCCAAATACAAGCCAGTGGAACACTGATTAGC
                      ____________________________________________________________
consensus             ATAAACACGAGAATAGACCCTGTGTTGGCCCAAATACAAGCCAGTGGAACACTGATTAGC
 
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JMSF027D05+           AGCAGAATAAGCATTGCCCTCTGCGTATGAACTCCTAGCAATCGGTAGTGTTTAGCGCCA
                      ____________________________________________________________
consensus             AGCAGAATAAGCATTGCCCTCTGCGTATGAACTCCTAGCAATCGGTAGTGTTTAGCGCCA
 
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JMSF027D05+           TATGCCTGACCACAGAATGTCTCCAATGCACAGGACATTCCATTCAGCAAGGTGTAACCA
                      ____________________________________________________________
consensus             TATGCCTGACCACAGAATGTCTCCAATGCACAGGACATTCCATTCAGCAAGGTGTAACCA
 
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JMSF027D05+           GTGACAGTGGCGAAAGAAGTGGCTATGGAGGCACCAGAAAGGGAGAGCTCTCCCAGGTGA
JMSF017F10+                                                                  GGTGA
                      ____________________________________________________________
consensus             GTGACAGTGGCGAAAGAAGTGGCTATGGAGGCACCAGAAAGGGAGAGCTCTCCCAGGTGA
 
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JMSF027D05+           CCAACAAACATGATGGAGATGACATTGAAGCAATTCAGCAAAAGGTTGACCGACATTAAT
JMSF017F10+           CCAACAAACATGATGGAGATGACATTGAAGCAATTCAGCAAAAGGTTGACCGACATTAAT
                      ____________________________________________________________
consensus             CCAACAAACATGATGGAGATGACATTGAAGCAATTCAGCAAAAGGTTGACCGACATTAAT
 
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JMSF027D05+           GGAGCTCCCAGCCCCATCAGCTTCTTGGCTTCCGCCTTCGTCTCGTCCCATTTCTTCCGC
JMSF017F10+           GGAGCTCCCAGCCCCATCAGCTTCTTGGCTTCCGCCTTCGTCTCGTCCCATTTCTTCCGC
                      ____________________________________________________________
consensus             GGAGCTCCCAGCCCCATCAGCTTCTTGGCTTCCGCCTTCGTCTCGTCCCATTTCTTCCGC
 
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JMSF027D05+           CTTTCTTTCCCATATTTTGAGATCAATGGAAACTCAACATCTTCTTCTCTCTCCCTGCCG
JMSF017F10+           CTTTGTTTCCCATATTTTGAGATCAATGGAAACTCAACATCTTCTTCTCTCTCCCTGCCG
                      ____________________________________________________________
consensus             CTTTGTTTCCCATATTTTGAGATCAATGGAAACTCAACATCTTCTTCTCTCTCCCTGCCG
 
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JMSF027D05+           CAGCTTTCCATTTTCTTTTTCTTTTCCTTTCTCTCTCCC                     
JMSF017F10+           CAGCTTTCCATTTTCTTTTTCTTTTCCTTTCTCTCTCCCTCCAATTCACTCTCAGTCTTC
                      ____________________________________________________________
consensus             CAGCTTTCCATTTTCTTTTTCTTTTCCTTTCTCTCTCCCTCCAATTCACTCTCAGTCTTC