Contig 007838:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017B23Sequence246007838 (2)ref|XP_009777807.1|6e-27PREDICTED: 54S ribosomal protein L39, mitochondrial-like [Nicotiana sylvestris]143007838 (2)

Alignment

This contig is upended


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rJMSF017B23+                                                                GAGAGG
JMSF017B23-                                                                 GAGAGG
                      ____________________________________________________________
consensus                                                                   GAGAGG
 
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rJMSF017B23+          TTTAGGNGAGTCCNNGTAGCCNCCGATCTCTTCATCTNCGAACTCCCAAAGCNGAAANTN
JMSF017B23-           TTTAGGAGAGTCCAAGTAGCCACCGATCTCTTCATCTCCGAACTCCCAAAGCAGAAATTC
                      ____________________________________________________________
consensus             TTTAGGAGAGTCCAAGTAGCCACCGATCTCTTCATCTCCGAACTCCCAAAGCAGAAATTC
 
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rJMSF017B23+          TGCCAGTTCAAACTNAGAAATGGGTGACAAGAAGAAGGCGGGTGCGATCTTTGTGAGGCT
JMSF017B23-           TGACAGTTCAAACTAAGAAATGGGTGACAAGAAGAAGGCGGGTGCGATCTTTGTGAGGCT
                      ____________________________________________________________
consensus             TGCCAGTTCAAACTAAGAAATGGGTGACAAGAAGAAGGCGGGTGCGATCTTTGTGAGGCT
 
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rJMSF017B23+          CGTTTCAG                                                    
JMSF017B23-           CGTTTCAGCTGCAGGCACTGGATTCTTCTACGTGGTGAAGAAGACAAAGAGGCTTCAGAC
                      ____________________________________________________________
consensus             CGTTTCAGCTGCAGGCACTGGATTCTTCTACGTGGTGAAGAAGACAAAGAGGCTTCAGAC
 
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JMSF017B23-           GAGTCAGACAAAACTCGAGTTTCGGAAGTATGATCCTCGCGTGAATTGCCATGTTCTGTT
                      ____________________________________________________________
consensus             GAGTCAGACAAAACTCGAGTTTCGGAAGTATGATCCTCGCGTGAATTGCCATGTTCTGTT