Contig 007837:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027L19Sequence542007837 (10)ref|XP_009592421.1|0.001PREDICTED: hornerin-like [Nicotiana tomentosiformis]
JMFF030O08Sequence492007837 (10)
JMFF040J24Sequence543007837 (10)ref|XP_009592421.1|0.001PREDICTED: hornerin-like [Nicotiana tomentosiformis]
JMFN008B16Sequence620007837 (10)
JMFN013A23Sequence604007837 (10)
JMFN020O10Sequence621007837 (10)
JMFN028F20Sequence626007837 (10)
JMFN031N17Sequence491007837 (10)
JMFN043E17Sequence549007837 (10)
JMSF017B08Sequence457007837 (10)ref|XP_009592421.1|5e-04PREDICTED: hornerin-like [Nicotiana tomentosiformis]188019284

Alignment

This contig is upended


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JMFN020O10+                                CAGAAACCATGTTTTTAATTAATAGATATGGAGTAATAA
JMFN013A23+                                CAGAAACCATGTTTTTAATTAATAGATATGGAGTAATAA
JMFN031N17-                                CAGAAACCATGTTTTTAATTAATAGATATGGAGTAATAA
JMFN028F20+                       TGGCATATACAGAAACCATGTTTTTAATTAATAGATATGGAGTAATAA
JMFN008B16+                                   AAACCATGTTTTTAATTAATAGATATGGAGTAATAA
                      ____________________________________________________________
consensus                         TGGCATATACAGAAACCATGTTTTTAATTAATAGATATGGAGTAATAA
 
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JMFN020O10+           NTACATAGGAAATTTAGAATTTATTCTGCATAGCATATCACAGCACACACCA-TTTTTTT
JMFN013A23+           ATACATAGGAAATTTAGAATTTATTCTGCATAGCATATCACAGCACACACCATTTTTTTT
JMFN043E17-             ACATAGGAAATTTAGAATTTATTCTGCATAGCATATCACAGCACACACCA-TTTTTTT
JMFN031N17-           ATACATAGGAAATTTAGAATTTATTCTGCATAGCATATCACAGCACACACCA-TTTTTTT
JMFN028F20+           ATACATAGGAAATTTAGAATTTATTCTGCATAGCATATCACAGCACACACCA-TTTTTTT
JMFN008B16+           ATACATAGGAAATTTAGAATTTATTCTGCATAGCATATCACAGCACACACCA-TTTTTTT
JMFF027L19+                                                                   TTTT
JMFF040J24+                                                                    TTT
                      ____________________________________________________________
consensus             ATACATAGGAAATTTAGAATTTATTCTGCATAGCATATCACAGCACACACCA-TTTTTTT
 
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JMFN020O10+           TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
JMFN013A23+           TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
JMFN043E17-           TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
JMFN031N17-           TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAAAATAACAGAAGTACCATCA
JMFN028F20+           TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
JMFN008B16+           TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
JMFF027L19+           TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
rJMFF030O08-                                                       ACAGAAGTACCATCA
JMFF040J24+           TTTTTTTCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
                      ____________________________________________________________
consensus             TTTTTTCCTCTATTTCAAATTTAGCGTAGTATAGAATTCAGAATAACAGAAGTACCATCA
 
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JMFN020O10+           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMFN013A23+           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMFN043E17-           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMFN031N17-           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMFN028F20+           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMFN008B16+           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMFF027L19+           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
rJMFF030O08-          CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMFF040J24+           CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
JMSF017B08+                                  CACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
                      ____________________________________________________________
consensus             CTCTTTATCTTCCTTCATTGGATCACTCTTATTCATAGTTCTTGATTCTTCATCCCCATG
 
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JMFN020O10+           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
JMFN013A23+           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
JMFN043E17-           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
JMFN031N17-           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
JMFN028F20+           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
JMFN008B16+           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
JMFF027L19+           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
rJMFF030O08-          GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTT--
JMFF040J24+           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
JMSF017B08+           GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
                      ____________________________________________________________
consensus             GTTTTCACTTCTCATCATCGCTCTCATCACTGCTGCTGTCACTGCTATGATTGCAGTTTC
 
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JMFN020O10+           CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMFN013A23+           CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMFN043E17-           CTTCCCTGGGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMFN031N17-           CTTCCCTGGGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMFN028F20+           CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMFN008B16+           CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMFF027L19+           CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
rJMFF030O08-          -TTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMFF040J24+           CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
JMSF017B08+           CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
                      ____________________________________________________________
consensus             CTTCCCTGTGCTTTTTCTTCCCGCCTATGGTCTTCAGCTGGGTTTTCATCTTCTCCACGA
 
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JMFN020O10+           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
JMFN013A23+           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
JMFN043E17-           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
JMFN031N17-           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAAATTGATGGCCATGCT
JMFN028F20+           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
JMFN008B16+           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
JMFF027L19+           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
rJMFF030O08-          AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
JMFF040J24+           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
JMSF017B08+           AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
                      ____________________________________________________________
consensus             AACCCTCTTTCTTCTCATAGGTTACAGTTGAGCCCTGGCATGCAGATTGATGGCCATGCT
 
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JMFN020O10+           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMFN013A23+           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMFN043E17-           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMFN031N17-           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMFN028F20+           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMFN008B16+           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMFF027L19+           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
rJMFF030O08-          GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMFF040J24+           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
JMSF017B08+           GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
                      ____________________________________________________________
consensus             GTTTGTGAGCGTCGTGATGAAACACTTTTCCTGCCATTTCTTTCACCTTGTCGGTTAAAG
 
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JMFN020O10+           AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
JMFN013A23+           AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
JMFN043E17-           AATGGGGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
JMFN031N17-           AATGGTGTTGATCGTTCTCGACCTTGGGGCTG                            
JMFN028F20+           AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
JMFN008B16+           AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
JMFF027L19+           AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
rJMFF030O08-          AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
JMFF040J24+           AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
JMSF017B08+           AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
                      ____________________________________________________________
consensus             AATGGTGTTGATCGTTCTCGACCTTGTGGCTGGTAACGGTGGTGGTTGTGATGGTGGTCT
 
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JMFN020O10+           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
JMFN013A23+           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
JMFN043E17-           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAA                  
JMFN028F20+           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
JMFN008B16+           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
JMFF027L19+           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
rJMFF030O08-          GATCCACTTCTTTGTAGCACTGGGTCNACGCCATTGAATCAATGCAACGAAGAGATCGAG
JMFF040J24+           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
JMSF017B08+           GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
                      ____________________________________________________________
consensus             GATCCACTTCTTTGTAGCACTGGGTCGACGCCATTGAATCAATGCAACGAAGAGATCGAG
 
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JMFN020O10+           TACACAGGAAGTGGTATTTAGAGGC                                   
JMFN013A23+           TACACAGGAAGTGGTATTTAGAGG                                    
JMFN028F20+           TACACAGGAAGTGGTATTTAGAGGCTTAAATTAATTGGT                     
JMFN008B16+           TACACAGGAAGTGGTATTTAGAGGCTTAAATTAATTGGTGTTTTT               
JMFF027L19+           TACACAGGAAGTGGTATTTAGAGGCTTAAATTAATTGGTGTTTTTGATCACTTGC     
rJMFF030O08-          TACACAGGAAGTGGTATTTAGAGGCTTAAATTAATTGGTGTTTTTGATCACTTGC     
JMFF040J24+           TACACAGGAAGTGGTATTTAGAGGCTTAAATTAATTGGTGTTTTTGATCACTTGC     
JMSF017B08+           TACACAGGAAGTGGTATTTAGAGGCTTAAATTAATTGGTGTTTTTGATCACTTGCTTTTC
                      ____________________________________________________________
consensus             TACACAGGAAGTGGTATTTAGAGGCTTAAATTAATTGGTGTTTTTGATCACTTGCTTTTC