Contig 007836:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS104G07Sequence627007836 (2)emb|CDP17121.1|2e-57unnamed protein product [Coffea canephora]
JMSF016N13Sequence230007836 (2)797015005ref|XP_009609520.1|3e-88PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A [Nicotiana to

Alignment

This contig is upended


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JMFS104G07+                         GCTTTTCGTTCCAATCTCTCTTGATCTGGTCTAGGGAGAGGTGCAT
                      ____________________________________________________________
consensus                           GCTTTTCGTTCCAATCTCTCTTGATCTGGTCTAGGGAGAGGTGCAT
 
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JMFS104G07+           TAATGGACATGGACTTGTTCTCCATTCTTTGTATGTTCTTCCTTAGTTTGCTAAAGCCTG
                      ____________________________________________________________
consensus             TAATGGACATGGACTTGTTCTCCATTCTTTGTATGTTCTTCCTTAGTTTGCTAAAGCCTG
 
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JMFS104G07+           ACTTCCCCTGGAGTGGGTCCAGAAGATCTTGAATACTAATGCGGCCATCACCCTCCAGAA
                      ____________________________________________________________
consensus             ACTTCCCCTGGAGTGGGTCCAGAAGATCTTGAATACTAATGCGGCCATCACCCTCCAGAA
 
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JMFS104G07+           TATCCCGACTGGGATTATATTCAGACTCTGGATATGCCTCGGATACTATAGCATCACTTC
                      ____________________________________________________________
consensus             TATCCCGACTGGGATTATATTCAGACTCTGGATATGCCTCGGATACTATAGCATCACTTC
 
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JMFS104G07+           TCTTCTTCTTACCTACAAAGGCATCACCGGGCAGGCCAGTTATTTCCTGCAACATCCGTG
                      ____________________________________________________________
consensus             TCTTCTTCTTACCTACAAAGGCATCACCGGGCAGGCCAGTTATTTCCTGCAACATCCGTG
 
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JMFS104G07+           AATGTCTTTCATCAGCATCCTCCTCAAAATCATCTCTGTCTTGATTATTTTCATCATCTT
                      ____________________________________________________________
consensus             AATGTCTTTCATCAGCATCCTCCTCAAAATCATCTCTGTCTTGATTATTTTCATCATCTT
 
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JMFS104G07+           CATAGTCTTCATCCTCAGACGTCACATTCTCATCCTTGAAGTCTTCAGGAAGTTCATGTA
                      ____________________________________________________________
consensus             CATAGTCTTCATCCTCAGACGTCACATTCTCATCCTTGAAGTCTTCAGGAAGTTCATGTA
 
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JMFS104G07+           GCTCACTTAAGTAATTCTCCACAGGATCATATCGTTTGTTCTTCTTAGATTCCTCCTCGG
                      ____________________________________________________________
consensus             GCTCACTTAAGTAATTCTCCACAGGATCATATCGTTTGTTCTTCTTAGATTCCTCCTCGG
 
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JMFS104G07+           CAAAACCTTGTTCGTACTCGTACACATCACCAGCGGCGACATCAGAGTCGGAAGCATCAG
JMSF016N13+                     TTCGTACTCGTACACATCACCGGCGGCGACATCAGAGTCGGAAGCATCAG
                      ____________________________________________________________
consensus             CAAAACCTTGTTCGTACTCGTACACATCACCGGCGGCGACATCAGAGTCGGAAGCATCAG
 
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JMFS104G07+           AGTCCGACGCGTCTTGAAGAGCAATCTGCTTTCGGAGAACATTGGGCAAGCCCGGCCCAT
JMSF016N13+           AGTCCGGCGCGTCTTGAAGAGCAATCTGCTTTCGGAGAACATTGGGCAAGCCAGGCCCGC
                      ____________________________________________________________
consensus             AGTCCGGCGCGTCTTGAAGAGCAATCTGCTTTCGGAGAACATTGGGCAAGCCCGGCCCGT
 
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JMFS104G07+           GCCTTCTCTTTCCCCTCTCATCTTTGTTAGAACCCTTCCCA                   
JMSF016N13+           GCCTTCTCTTTCCCCTCTCGTCTTTGTTAGAATCCTTCCCACGACTGAACTTCCTCCTCT
                      ____________________________________________________________
consensus             GCCTTCTCTTTCCCCTCTCGTCTTTGTTAGAATCCTTCCCACGACTGAACTTCCTCCTCT
 
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JMSF016N13+           TGCCTCTGCCTCCATTGGCTCCCTCCTTGCCTCTGCTCTTCAAATCCGCCATGCTTTCTC
                      ____________________________________________________________
consensus             TGCCTCTGCCTCCATTGGCTCCCTCCTTGCCTCTGCTCTTCAAATCCGCCATGCTTTCTC