Contig 007835:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016N03Sequence520007835 (2)ref|XP_009589985.1|5e-35PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Nicotiana tome704009939 (2)gb|AFK45504.1|8e-45unknown [Lotus japonicus]
JMSF035G04Sequence667007835 (2)ref|XP_009589985.1|7e-55PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Nicotiana tome771009939 (2)gb|AFK45504.1|2e-63unknown [Lotus japonicus]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035G04+ CTAACAGGTGTC
                      ____________________________________________________________
consensus CTAACAGGTGTC
 
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JMSF035G04+ CCTGTACAGATGCCTGAAGCCTGGTCAAACTCAAAAACAGCCAAATATTTCCTGAACTTT
                      ____________________________________________________________
consensus CCTGTACAGATGCCTGAAGCCTGGTCAAACTCAAAAACAGCCAAATATTTCCTGAACTTT
 
. : . : . : . : . : . :
JMSF035G04+ GATCGCAATTGAAACCCCCGCAACCAAGCCAAGCTAAGTGCCAACAACACCGCACCAGAA
                      ____________________________________________________________
consensus GATCGCAATTGAAACCCCCGCAACCAAGCCAAGCTAAGTGCCAACAACACCGCACCAGAA
 
. : . : . : . : . : . :
JMSF035G04+ ACAAGAAACAACCCTACCCCACCTTCCCAAATGCTCCTTCTCCCAAACCCAAAATCATTC
JMSF016N03+ CTTCCCAAATGCTCCTTCTCCCAAACCCAAAATCATTC
                      ____________________________________________________________
consensus ACAAGAAACAACCCTACCCCACCTTCCCAAATGCTCCTTCTCCCAAACCCAAAATCATTC
 
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JMSF035G04+ AGTGGCCGTAGAGTCTGCCTCCAAATGTTCCTTGGCACATCCAAAACAACAGAAAATACA
JMSF016N03+ AGTGGCCGTAGAGTCTGCCTCCAAATGTTCCTTGGCACATCCAAAACAACAGAAAATACA
                      ____________________________________________________________
consensus AGTGGCCGTAGAGTCTGCCTCCAAATGTTCCTTGGCACATCCAAAACAACAGAAAATACA
 
. : . : . : . : . : . :
JMSF035G04+ TTTTTGCGCACAGAAGCCACCCCGGGCTGTTCTTGTTTCTGCTCCTGACTATGACCCGTA
JMSF016N03+ TTTTTGCGCACAGAAGCCACCCCGGGCTGTTCTTGTTTCTGCTCCTGACTATGACCCGTA
                      ____________________________________________________________
consensus TTTTTGCGCACAGAAGCCACCCCGGGCTGTTCTTGTTTCTGCTCCTGACTATGACCCGTA
 
. : . : . : . : . : . :
JMSF035G04+ TCTGCAGACATTGCTTTTACCCTAAAGACTCTACCACTGGGTCTTGCCGGAGTTCTTGAG
JMSF016N03+ TCTGCAGACATTGCTTTTACCCTAAAGACTCTACCACTGGGTCTTGCCGGAGTTCTTGAG
                      ____________________________________________________________
consensus TCTGCAGACATTGCTTTTACCCTAAAGACTCTACCACTGGGTCTTGCCGGAGTTCTTGAG
 
. : . : . : . : . : . :
JMSF035G04+ CGTGGCAAGAAATCCACAAGACCGTTACGCCTATTCGGCACAATATTCAACATGGTATAA
JMSF016N03+ CGTGGCAAGAAATCCACAAGACCGTTACGCCTATTCGGCACAATATTCAACATGGTATAA
                      ____________________________________________________________
consensus CGTGGCAAGAAATCCACAAGACCGTTACGCCTATTCGGCACAATATTCAACATGGTATAA
 
. : . : . : . : . : . :
JMSF035G04+ TTTGTGGAAAGATTAACTAATGCATTCCCAGCCATTCTTCTCTTCGTATAAATCCTATAT
JMSF016N03+ TTTGTGGAAAGATTAACTAATGCATTCCCAGCCATTCTTCTCTTCGTATAAATCCTATAT
                      ____________________________________________________________
consensus TTTGTGGAAAGATTAACTAATGCATTCCCAGCCATTCTTCTCTTCGTATAAATCCTATAT
 
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JMSF035G04+ ATTCTCTTTCACTCACTATTCATGTTACTGTTTATCTTCTCAGTGAAAATGGGAGCAGCT
JMSF016N03+ ATTCTCTTTCACTCACTATTCATGTTACTGTTTATCTTCTCAGTGAAAATGGGAGCAGCT
                      ____________________________________________________________
consensus ATTCTCTTTCACTCACTATTCATGTTACTGTTTATCTTCTCAGTGAAAATGGGAGCAGCT
 
. : . : . : . : . : . :
JMSF035G04+ AGGACGACGGGTATGTCAATTATCAACGTTGGCCGGCACCGGGTAGAGAGGTATACTGGA
JMSF016N03+ AGGACGACGGGTATGTCAATTATCAACGTTGGCCGGCACCGGGTAGAGAGGTATACTGGA
                      ____________________________________________________________
consensus AGGACGACGGGTATGTCAATTATCAACGTTGGCCGGCACCGGGTAGAGAGGTATACTGGA
 
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JMSF035G04+ AATTAATGCATTCACCGAGAGAAGGAGAGAGAGATATGACGGGAAATACACTCT
JMSF016N03+ AATTAATGCATTCACCGAGAGAAGGAGAGAGAGATATGACGGGAAATACACTCTACTCCC
                      ____________________________________________________________
consensus AATTAATGCATTCACCGAGAGAAGGAGAGAGAGATATGACGGGAAATACACTCTACTCCC