Contig 007828:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016H18Sequence367007828 (2)808001087 (2)ref|XP_004230898.1|6e-128PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [So
JMSF015L24Sequence339007828 (2)732001087 (2)ref|XP_004230898.1|2e-118PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [So

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF016H18+ CTGGAAGGCCGA
                      ____________________________________________________________
consensus CTGGAAGGCCGA
 
. : . : . : . : . : . :
JMFF016H18+ TTCAAACGGAGAAACAGGAAGATCAGGAAGAAGACCGTAACCATAATGGCAACCGTGGCT
JMSF015L24+ ATCAGGAAGAAGACCGTAACCATAATGGCAACCGTGGCT
                      ____________________________________________________________
consensus TTCAAACGGAGAAACAGGAAGATCAGGAAGAAGACCGTAACCATAATGGCAACCGTGGCT
 
. : . : . : . : . : . :
JMFF016H18+ GCGATTACGACGTAGAGTGGAAGTCCTAGTATTGGAGTTTTTGAGCTAAAAAAAGTGGTA
JMSF015L24+ GCGATTACGACGTAGAGTGGAAGTCCTAGTATTGGAGTTTTTGAGCTAAAAAAAGTGGTA
                      ____________________________________________________________
consensus GCGATTACGACGTAGAGTGGAAGTCCTAGTATTGGAGTTTTTGAGCTAAAAAAAGTGGTA
 
. : . : . : . : . : . :
JMFF016H18+ GAGCTTTGATTATCGCCGGAAACCGCCATTTTCTCCGGCAGCTAGATTGGAATGTAAGAG
JMSF015L24+ GAGCTTTGATTATCGCCGGAAACCGCCATTTTCTCCGGCAGCTAGATTGGAATGTAAGAG
                      ____________________________________________________________
consensus GAGCTTTGATTATCGCCGGAAACCGCCATTTTCTCCGGCAGCTAGATTGGAATGTAAGAG
 
. : . : . : . : . : . :
JMFF016H18+ ACTGTGTGAAGAAGAAGAAGGAGAAGGCGATTACGGTCCCAGCATTTGAAAAGTTCTTCG
JMSF015L24+ ACTGTGTGAAGAAGAAGAAGGAGAAGGCGATTACGGTCCCAGCATTTGAAAAGTTCTTCG
                      ____________________________________________________________
consensus ACTGTGTGAAGAAGAAGAAGGAGAAGGCGATTACGGTCCCAGCATTTGAAAAGTTCTTCG
 
. : . : . : . : . : . :
JMFF016H18+ CAGTCGGTGAGAGTTAAGGAAATGTGAATCCGGTGCCGCGAATTAAAGGGGAAAGCGCAA
JMSF015L24+ CAGTCGGTGAGAGTTAAGGAAATGTGAATCCGGTGCCGCGAATTAAAGGGGAAAGCGCAA
                      ____________________________________________________________
consensus CAGTCGGTGAGAGTTAAGGAAATGTGAATCCGGTGCCGCGAATTAAAGGGGAAAGCGCAA
 
. : . : . : . : . : . :
JMFF016H18+ CGGATACAGATTGCACTGTGTATAAAGATGAGAGAGAGAAGAGGAATAAGTGAAT
JMSF015L24+ CGGATACAGATTGCACTGTGTATAAAGATGAGAGAGAGAAGAGGAATAAGTGAATAACTC
                      ____________________________________________________________
consensus CGGATACAGATTGCACTGTGTATAAAGATGAGAGAGAGAAGAGGAATAAGTGAATAACTC