Contig 007827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015K08Sequence426007827 (3)ref|XP_004238236.1|5e-08PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers751004229 (3)gb|AFK47412.1|1e-52unknown [Lotus japonicus]
JMSF015K18Sequence552007827 (3)ref|XP_004238236.1|2e-50PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers780004229 (3)ref|XP_011083720.1|4e-97PREDICTED: SPX and EXS domain-containing protein 1-like [Sesamum indicum]
JMSF038B03Sequence713007827 (3)ref|XP_004238236.1|8e-86PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers909004229 (3)ref|XP_011083720.1|3e-129PREDICTED: SPX and EXS domain-containing protein 1-like [Sesamum indicum]

Alignment

This contig is upended


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JMSF038B03+           AAGTAATGGCTTGTAGCGGGAAAACTATCNTCCAAAAGGTCCTCAAGAAAAAGTAGCGAG
                      ____________________________________________________________
consensus             AAGTAATGGCTTGTAGCGGGAAAACTATCNTCCAAAAGGTCCTCAAGAAAAAGTAGCGAG
 
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JMSF038B03+           TTGATAAATAAAAAATATCAAAGGGAGATATCAGTGCCATTGACAAAGCAGCATATAAGA
                      ____________________________________________________________
consensus             TTGATAAATAAAAAATATCAAAGGGAGATATCAGTGCCATTGACAAAGCAGCATATAAGA
 
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JMSF038B03+           GAACTGGTTGGGAGGCAGCCAAAGAGACCTCTCCATGTGAATAAAGATATAGATAGGCCG
JMSF015K18+                                                    TAAAGATATAGATAGGCCG
                      ____________________________________________________________
consensus             GAACTGGTTGGGAGGCAGCCAAAGAGACCTCTCCATGTGAATAAAGATATAGATAGGCCG
 
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JMSF038B03+           TCATGCTAGTAGGCACGATAATAGTCATCCAGGTGGCACACCTCCAAATTTCTCTGTGAC
JMSF015K18+           TCATGNTAGTAGGCACGATAATAGTCATCCAGGTGGCACACCTCCAAATTTCTCTGTGAC
                      ____________________________________________________________
consensus             TCATGCTAGTAGGCACGATAATAGTCATCCAGGTGGCACACCTCCAAATTTCTCTGTGAC
 
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JMSF038B03+           TGAGATGATTTTGGTCAAGATCAAAAATTTTAGGATAGTTGACATTAGACTGCATAAAAA
JMSF015K18+           TGAGATGATTTTGGTCAAGATCAAAAATTTTAGGATAGTTGACATTAGACTGCATAAAAA
                      ____________________________________________________________
consensus             TGAGATGATTTTGGTCAAGATCAAAAATTTTAGGATAGTTGACATTAGACTGCATAAAAA
 
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JMSF038B03+           CCCATAAGTTCACGCCCCAAAACCAAACCATCAGAGTCTTAAATCTCCAAAGCAAGACTG
JMSF015K08+                                                 TTAAATCTCCAAAGCAAGNCTG
JMSF015K18+           CCCATAAGTTCACGCCCCAAAACCAAACCATCAGAGTCTTAAATCTCCAAAGCAAGACTG
                      ____________________________________________________________
consensus             CCCATAAGTTCACGCCCCAAAACCAAACCATCAGAGTCTTAAATCTCCAAAGCAAGACTG
 
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JMSF038B03+           GAGATGGCAATATTGCCGTGGTGCTCAGTGGTGTGCTCACACCCTTCATTTCGTTCACCT
JMSF015K08+           GAGATGGCAATATNGCCNTGGTGNTCAGTGGTGTGCTCACNCCNTTCATTTNGTTCACNT
JMSF015K18+           GAGATGGCAATATTGCCGTGGTGCTCAGTGGTGTGCTCACACCCTTCATTTCGTTCACCT
                      ____________________________________________________________
consensus             GAGATGGCAATATTGCCGTGGTGCTCAGTGGTGTGCTCACACCCTTCATTTCGTTCACCT
 
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JMSF038B03+           CAATTGCATCCGAAAAAACTTCAACACTATTTCCCAGTTCAACAGGATCAGAAACAACTA
JMSF015K08+           CAATNGCATCCGAAAAAACTTCAACANTATTTNCCAGTTCAACAGGATCAGAAACAACTA
JMSF015K18+           CAATTGCATCCGAAAAAACTTCAACACTATTTCCCAGTTCAACAGGATCAGAAACAACTA
                      ____________________________________________________________
consensus             CAATTGCATCCGAAAAAACTTCAACACTATTTCCCAGTTCAACAGGATCAGAAACAACTA
 
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JMSF038B03+           CTCGGCTTCCAGACTTCCGAAGATGCGGACTGTTAACAGTAGTAGTAGTCACAAGACCCC
JMSF015K08+           CTCGGCTTCCAGACTTCCGANGATGCGGACTGTTAACAGTAGTAGTAGTCACAAGACCCC
JMSF015K18+           CTCGGCTTCCAGACTTCCGAAGATGCGGACTGTTAACAGTAGTAGTAGTCACAAGACCCC
                      ____________________________________________________________
consensus             CTCGGCTTCCAGACTTCCGAAGATGCGGACTGTTAACAGTAGTAGTAGTCACAAGACCCC
 
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JMSF038B03+           CAAACATAGATGGAGGTAGCAGAAGAAAGAATAACTACCAGAATTTAAGTAGTTGTCCTC
JMSF015K08+           CAAACNTAGATGGAGGTNGCAGAAGAAAGAATAACTACCAGAATTTAAGTAGTTGTCCTC
JMSF015K18+           CAAACATAGATGGAGGTAGCAGAAGAAAGAATAACTACCAGAATTTAAGTAGTTGTCCTC
                      ____________________________________________________________
consensus             CAAACATAGATGGAGGTAGCAGAAGAAAGAATAACTACCAGAATTTAAGTAGTTGTCCTC
 
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JMSF038B03+           CCCTGCTCCA-------AAAATGTGGCTTGGAGATTTCCCGGTGACCGGACAAAGAACTG
JMSF015K08+           CCNTGCTCCAAACTTGTAAAATGTGGCTTGGAGATTTCCCGGTGACCGGACAAAGAACTG
JMSF015K18+           CCCTGCTCCA-------AAAATGTGGCTTGGAGATTTCCCGGTGACCGGACAAAGAACTG
                      ____________________________________________________________
consensus             CCCTGCTCCA-------AAAATGTGGCTTGGAGATTTCCCGGTGACCGGACAAAGAACTG
 
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JMSF038B03+           ACGGAAAGCTGCCAAGATCTGATTTTGGTGCCAACTTCTTGTAAACTTAGAC        
JMSF015K08+           ACGGAAAGCTGCCAAGATCTGATTTTGGTGCCAACTTCTTGTAAACTTAGAC        
JMSF015K18+           ACGGAAAGCTGCCAAGATCTGATTTTGGTGCCAACTTCTTGTAAACTTAGACTAGAAACC
                      ____________________________________________________________
consensus             ACGGAAAGCTGCCAAGATCTGATTTTGGTGCCAACTTCTTGTAAACTTAGACTAGAAACC