Contig 007824:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015G09Sequence580007824 (2)ref|XP_009618701.1|1e-108PREDICTED: probable serine/threonine-protein kinase DDB_G0267514 [Nicotiana tom796007824 (2)ref|XP_009801619.1|6e-107PREDICTED: dual specificity protein kinase shkA-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF015G09-                        ACTATAAAAGTATAAAGTAATGTTGAAAAAATCGTTAGGCGCCTGG
                      ____________________________________________________________
consensus                           ACTATAAAAGTATAAAGTAATGTTGAAAAAATCGTTAGGCGCCTGG
 
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rJMSF015G09-          GGACCGCCTAAGACGCCTAAAGCACCTAGAGCGCCTAGAACGCCTAGGCGGGTTTCTAGG
                      ____________________________________________________________
consensus             GGACCGCCTAAGACGCCTAAAGCACCTAGAGCGCCTAGAACGCCTAGGCGGGTTTCTAGG
 
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rJMSF015G09-          AGGGCGACCGCCTAGTGTCTAGGCACGATTTTTGCAACACTGCTATAAAGCATCATCATG
                      ____________________________________________________________
consensus             AGGGCGACCGCCTAGTGTCTAGGCACGATTTTTGCAACACTGCTATAAAGCATCATCATG
 
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rJMSF015G09-          GGTGAGTAGTGCTTTGTGGATGTTTATGAGGGCACATGTTAGTGTTGCAAAAGATGGTCT
                      ____________________________________________________________
consensus             GGTGAGTAGTGCTTTGTGGATGTTTATGAGGGCACATGTTAGTGTTGCAAAAGATGGTCT
 
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rJMSF015G09-          CATGGCAGAATCTTCATCCCATGAATGTTGTATCACCTCAATTATCTCTTTTGTTTGGAC
                      ____________________________________________________________
consensus             CATGGCAGAATCTTCATCCCATGAATGTTGTATCACCTCAATTATCTCTTTTGTTTGGAC
 
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rJMSF015G09-          ATCATCATCATGCTCTTCTGGAAGTGCTGGCCTCAATCCATTCTCTGCAACTTCTATGGC
                      ____________________________________________________________
consensus             ATCATCATCATGCTCTTCTGGAAGTGCTGGCCTCAATCCATTCTCTGCAACTTCTATGGC
 
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rJMSF015G09-          TATCTTTGAAGGACCATACTCGGTTTCAATATATGGATGTTCACCGGTAATAAGCTCGTT
                      ____________________________________________________________
consensus             TATCTTTGAAGGACCATACTCGGTTTCAATATATGGATGTTCACCGGTAATAAGCTCGTT
 
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rJMSF015G09-          GAGTATGATGCCGAAGCTATACACATCACTTTTTTCATCATAAGGCTCTGAGCGAATTAC
JMSF015G09+                               ACACATCACTTTTTTCATCATAAGGCTCTGAGCGAATTAC
                      ____________________________________________________________
consensus             GAGTATGATGCCGAAGCTATACACATCACTTTTTTCATCATAAGGCTCTGAGCGAATTAC
 
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rJMSF015G09-          TTCAGGAGCCATATAAACATAAGTTCCTGTTTCTCCGGTTAGAGCCTTTTCCTGGTAGCT
JMSF015G09+           TTCAGGAGCCATATAAACATAAGTTCCTGTTTCTCCGGTTAGAGCCTTTTCCTGGTAGCT
                      ____________________________________________________________
consensus             TTCAGGAGCCATATAAACATAAGTTCCTGTTTCTCCGGTTAGAGCCTTTTCCTGGTAGCT
 
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rJMSF015G09-          TAGGAACCTAGCATGCCCAAAATCTGCAACTCTAACATGAAATGCATCATCAAGAAAAAT
JMSF015G09+           TAGGAACCTAGCATGCCCAAAATCTGCAACTCTAACATGAAATGCATCATCAAGAAAAAT
                      ____________________________________________________________
consensus             TAGGAACCTAGCATGCCCAAAATCTGCAACTCTAACATGAAATGCATCATCAAGAAAAAT
 
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rJMSF015G09-          GTTGCTAGGCTTCAAGTCTCTATGAACCACCTTCAATGGCCTCTGGGCATGGAGATACTG
JMSF015G09+           GTTGCTAGGCTTCAAGTCTCTATGAACCACCTTCAATGGCCTCTGGGCATGGAGATACTG
                      ____________________________________________________________
consensus             GTTGCTAGGCTTCAAGTCTCTATGAACCACCTTCAATGGCCTCTGGGCATGGAGATACTG
 
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rJMSF015G09-          CATCGCCTGCGAGATCTCAACGGCCTTAGCCAACCTCTCTGCAATGGGGGGAAGAGGAAC
JMSF015G09+           CATCGCCTGCGAGATCTCAACGGCCTTAGCCAACCTCTCTGCAATGGGGGGAAGAGGAAC
                      ____________________________________________________________
consensus             CATCGCCTGCGAGATCTCAACGGCCTTAGCCAACCTCTCTGCAATGGGGGGAAGAGGAAC
 
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rJMSF015G09-          ACTTCTCTCTCTTCTCCTCTTGCCCGGGCCGTGGAGCCAATCTTTCAATGTGGTGNCCAA
JMSF015G09+           ACTTCTCTCTCTTCTCCTCTTGCCCGGGCCGTGGAGCCAATCTTTCAATGTGGTGCCCAG
                      ____________________________________________________________
consensus             ACTTCTCTCTCTTCTCCTCTTGCCCGGGCCGTGGAGCCAATCTTTCAATGTGGTGCCCAG
 
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rJMSF015G09-          AAACTCCGTCACTATCCACCCGTGCTCCGG                              
JMSF015G09+           AAACTCCGTCACTATCCACCCGTGCTCCGGCGGCTCCAGGCACGCCCCCATCAGGCTTAG
                      ____________________________________________________________
consensus             AAACTCCGTCACTATCCACCCGTGCTCCGGCGGCTCCAGGCACGCCCCCATCAGGCTTAG
 
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JMSF015G09+           CACGAAGCGGTGGCGTTGCCGGGAAAGGGTTTCCACTTCTTGCGCGAAGAAGCCGACGCC
                      ____________________________________________________________
consensus             CACGAAGCGGTGGCGTTGCCGGGAAAGGGTTTCCACTTCTTGCGCGAAGAAGCCGACGCC
 
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JMSF015G09+           GTTGTCGTTGGAGTGGAAGAAATCTGGGTATATGCATTTCACGGCGACGTCGAGGCCGCG
                      ____________________________________________________________
consensus             GTTGTCGTTGGAGTGGAAGAAATCTGGGTATATGCATTTCACGGCGACGTCGAGGCCGCG
 
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JMSF015G09+           CCACCTTGCTTTGTATATGTCCGCCGTGGTTCCTTGCGCTACCAGTTCTTGCAGTTCTCA
                      ____________________________________________________________
consensus             CCACCTTGCTTTGTATATGTCCGCCGTGGTTCCTTGCGCTACCAGTTCTTGCAGTTCTCA