Contig 007816:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043I20-                                  GTATAAGCGTATCCTGAAGCTCTGGTATAAAATCCA
                      ____________________________________________________________
consensus                                     GTATAAGCGTATCCTGAAGCTCTGGTATAAAATCCA
 
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rJMSF043I20-          GATATTTTACATGAGCTCAGTGTTCATAAACTAGAAAATGCTCACCTCATAAGTTTTTTA
rJMSF014E19-                                               ATGCTCACCTCATAAGTTTTTTA
                      ____________________________________________________________
consensus             GATATTTTACATGAGCTCAGTGTTCATAAACTAGAAAATGCTCACCTCATAAGTTTTTTA
 
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rJMSF043I20-          TGAGTATGCAATTTACAGAGTGGAGAAAGACTATTTAAGAAATAGTATCCTGCAGGAAAA
rJMSF014E19-          TGAGTATGCAATTTACAGAGTGGAGAAAGACTATTTAAGAAATAGTATCCTGCAGGAAAA
                      ____________________________________________________________
consensus             TGAGTATGCAATTTACAGAGTGGAGAAAGACTATTTAAGAAATAGTATCCTGCAGGAAAA
 
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rJMSF043I20-          AGGAATGGTAGACAAAAGAAAACAAATTTTAACTATTCAAGAAATGGTATTTTGATTCAA
rJMSF014E19-          AGGAATGGTAGACAAAAGAAAACAAATTTTAACTATTCAAGAAATGGTATTTTGATTCAA
                      ____________________________________________________________
consensus             AGGAATGGTAGACAAAAGAAAACAAATTTTAACTATTCAAGAAATGGTATTTTGATTCAA
 
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rJMSF043I20-          CATAGCTTTCTGCTTCCCATAAAAATGATCCTAAAGCTACTGCCTCCAGAACCAGCATGG
rJMSF014E19-          CATAGCTTTCTGCTTCCCATAAAAATGATCCTAAAGCTACTGCCTCCAGAACCAGCATGG
                      ____________________________________________________________
consensus             CATAGCTTTCTGCTTCCCATAAAAATGATCCTAAAGCTACTGCCTCCAGAACCAGCATGG
 
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rJMSF043I20-          TCAACCCAGAATATGATAGGGAAACCACTTCGTCATTAGACACATCGAGGGTACCATCTT
rJMSF014E19-          TCAACCCAGAATATGATAGGGAAACCACTTCGTCATTAGACACATCGAGGGTACCATCTT
                      ____________________________________________________________
consensus             TCAACCCAGAATATGATAGGGAAACCACTTCGTCATTAGACACATCGAGGGTACCATCTT
 
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rJMSF043I20-          CTGAAACCTTGATGTCAGGCCTTCCAAATAATGCTTGTGTCTGCTTTTCTATCACAGAAA
rJMSF014E19-          CTGAAACCTTGATGTCAGGCCTTCCAAATAATGCTTGTGTCTGCTTTTCTATCACAGAAA
                      ____________________________________________________________
consensus             CTGAAACCTTGATGTCAGGCCTTCCAAATAATGCTTGTGTCTGCTTTTCTATCACAGAAA
 
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rJMSF043I20-          GTGCTTCTTTAGATCTTAAGGTAGCATATCTCTGAAGGGTCTCTGCATCCAAATACATTA
rJMSF014E19-          GTGCTTCTTTAGATCTTAAGGTAGCATATCTCTGAAGGGTCTCTGCATCCAAATACATTA
                      ____________________________________________________________
consensus             GTGCTTCTTTAGATCTTAAGGTAGCATATCTCTGAAGGGTCTCTGCATCCAAATACATTA
 
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rJMSF043I20-          CATAGGATCTCAACCTATATGATTTACTACCATCAGTGACTGAGCCCATTAAACCTTCTG
rJMSF014E19-          CATAGGATCTCAACCTATATGATTTACTACCATCAGTGACTGAGCCCATTAAACCTTCTG
                      ____________________________________________________________
consensus             CATAGGATCTCAACCTATATGATTTACTACCATCAGTGACTGAGCCCATTAAACCTTCTG
 
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rJMSF043I20-          TATCGACATCCTCAGGTTCAATCACTATTAATGAATCTGGATCCCAGAGTTGATTTCCAG
rJMSF014E19-          TATCGACATCCTCAGGTTCAATCACTATTAATGAATCTGGATCCCAGAGTTGATTTCCAG
                      ____________________________________________________________
consensus             TATCGACATCCTCAGGTTCAATCACTATTAATGAATCTGGATCCCAGAGTTGATTTCCAG
 
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rJMSF043I20-          CAGGCTGTTCAGGTCGTGGTTTGCCCAAGAAACCTTCAGGAAGGGTATTCATAGATCTTT
rJMSF014E19-          CAGGCTGTTCAGGTCGTGGTTTGCCCAAGAAACCTTCAGGAAGGGTATTCATAGATCTTT
                      ____________________________________________________________
consensus             CAGGCTGTTCAGGTCGTGGTTTGCCCAAGAAACCTTCAGGAAGGGTATTCATAGATCTTT
 
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rJMSF043I20-          CAAGTTGATAACGCTGATCAACCCTTTTGAGGAAGTATCCATACATTATAGAGGCAGCAT
rJMSF014E19-          CAAGTTGATAACGCTGATCAACCCTTTTGAGGAAGTATCCATACATTATAGAGGCAGCAT
JMSF043I20+                                                            AGAGGCAGCAT
                      ____________________________________________________________
consensus             CAAGTTGATAACGCTGATCAACCCTTTTGAGGAAGTATCCATACATTATAGAGGCAGCAT
 
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rJMSF043I20-          AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGTTGTC-AAAGGCCCTACATCAC
rJMSF014E19-          AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGTTGTCAAAAGGCCCTACATCAC
JMSF043I20+           AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGNTGTCAAAAGGCCCTACATCAC
                      ____________________________________________________________
consensus             AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGTTGTCAAAAGGCCCTACATCAC
 
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rJMSF043I20-          GTTCACCT                                                    
rJMSF014E19-          GTTCACCTAGAACCAGAGAAAGGTGGCTAACTATCATTTCAAAAGCCTCAGGAGAGTGCA
JMSF043I20+           GTTCACCTAGAACCAGAGAAAGGTGGCTAACTATCATTTCAAAAGCCTCAGGAGAGTGCA
                      ____________________________________________________________
consensus             GTTCACCTAGAACCAGAGAAAGGTGGCTAACTATCATTTCAAAAGCCTCAGGAGAGTGCA
 
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rJMSF014E19-          CAGATTCNAGCTTCTGCTCTTGATTAGGCCAAAAATCCACTCTTCC              
JMSF043I20+           CAGATTCAAGCTTCTGCTCTTGATTAGGCCAAAAATCCACTCTTCCAGTGGGATCTGAGG
                      ____________________________________________________________
consensus             CAGATTCAAGCTTCTGCTCTTGATTAGGCCAAAAATCCACTCTTCCAGTGGGATCTGAGG
 
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JMSF043I20+           TTGCTGATATCTTTGGAATCATTGATATATCTTTGTCTATGAACTTATGTACAACTATTG
                      ____________________________________________________________
consensus             TTGCTGATATCTTTGGAATCATTGATATATCTTTGTCTATGAACTTATGTACAACTATTG
 
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JMSF043I20+           AGTATAAAATCTCCACTAGTGCTTTTCGCCTTTCTTTCTCTCTCACTTCAGCTATTCTCT
                      ____________________________________________________________
consensus             AGTATAAAATCTCCACTAGTGCTTTTCGCCTTTCTTTCTCTCTCACTTCAGCTATTCTCT
 
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JMSF043I20+           TATAGAGCAAATCTTGAGATGGAGGTAGTTTTTCTTTTTTCTGTTCATCCTTTTCATTCT
                      ____________________________________________________________
consensus             TATAGAGCAAATCTTGAGATGGAGGTAGTTTTTCTTTTTTCTGTTCATCCTTTTCATTCT
 
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JMSF043I20+           GAAGATTCTCAAGCTGCTGATCAATAGCCGCCAGGAGCAGATGAGGATTGGTTTGCAATG
                      ____________________________________________________________
consensus             GAAGATTCTCAAGCTGCTGATCAATAGCCGCCAGGAGCAGATGAGGATTGGTTTGCAATG
 
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JMSF043I20+           TTTGTTCCAAAAACTGACCAATGGGAGACTCCAACTGAAGAGGAGCAAATGGGACTGAAT
                      ____________________________________________________________
consensus             TTTGTTCCAAAAACTGACCAATGGGAGACTCCAACTGAAGAGGAGCAAATGGGACTGAAT
 
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JMSF043I20+           CACCACCCGAATTTCCTGATGCTCTTACTTTTAATCTTCGGGTTTGAGACCTATCTTGTC
                      ____________________________________________________________
consensus             CACCACCCGAATTTCCTGATGCTCTTACTTTTAATCTTCGGGTTTGAGACCTATCTTGTC
 
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JMSF043I20+           CATTTTTTAGCTTTCGAACAGAAAATGATAGATATCCAGTGGGGAAAGCAGGGGAGAAGA
JMSF014E19+                                                                   AAGA
                      ____________________________________________________________
consensus             CATTTTTTAGCTTTCGAACAGAAAATGATAGATATCCAGTGGGGAAAGCAGGGGAGAAGA
 
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JMSF043I20+           GAGACTTGGTGGAGTCTGAGAATGAGCGGAAATGATTGAATTCGTAGGGGAGCTTGCAAC
JMSF014E19+           GAGACTTGGTGGAGTCTGAGAATGAGCGGAAATGATTGAATTCGTAGGGGAGCTTGCAAC
                      ____________________________________________________________
consensus             GAGACTTGGTGGAGTCTGAGAATGAGCGGAAATGATTGAATTCGTAGGGGAGCTTGCAAC
 
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JMSF043I20+           CGCCGGCAGCTGTGGTTGCCGTTGACGGAAGAACCACCGGCGGCGCATCAGCCAATATGC
JMSF014E19+           CGCCGGCAGCTGTGGTTGCCGTTGACGGAAGAACCACCGGCGGCGCATCAGCCAATATGC
                      ____________________________________________________________
consensus             CGCCGGCAGCTGTGGTTGCCGTTGACGGAAGAACCACCGGCGGCGCATCAGCCAATATGC
 
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JMSF043I20+           CGGAAATTTGCATCGCGTAAGTGGTTACGACAGGGCGGACGACTGAT             
JMSF014E19+           CGGAAATTTGCATCGCGTAAGTGGTTACGACAGGGCGGACGACTGATAATCTTCTTCGTG
                      ____________________________________________________________
consensus             CGGAAATTTGCATCGCGTAAGTGGTTACGACAGGGCGGACGACTGATAATCTTCTTCGTG
 
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JMSF014E19+           GTGGTGGTGCTGGTCTTGTTTCCGTTATTCTCGTGAGAGAAAGATGTTACGTGGCCACCC
                      ____________________________________________________________
consensus             GTGGTGGTGCTGGTCTTGTTTCCGTTATTCTCGTGAGAGAAAGATGTTACGTGGCCACCC