Contig 007814:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013N24Sequence260007814 (2)743008752 (6)ref|XP_009630290.1|234PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis]
JMSF031F14Sequence631007814 (2)ref|XP_009630290.1|203PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis]702008752 (6)ref|XP_009630290.1|206PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF031F14+                                  AAACGTCAATGATTCTTTGCTAAAACCCACCAAGTGC
                      ____________________________________________________________
consensus                                    AAACGTCAATGATTCTTTGCTAAAACCCACCAAGTGC
 
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JMSF031F14+           GCTCCAAAAGGAATCATCCACGAACCAATAAACCAGAAGGACACAATCCAAAGGAGCATA
                      ____________________________________________________________
consensus             GCTCCAAAAGGAATCATCCACGAACCAATAAACCAGAAGGACACAATCCAAAGGAGCATA
 
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JMSF031F14+           ACCTGAAAGATGGTCTTTGCTGTCCATGGGACGTCCCAAGGTTCACCAATCACTCTACGT
                      ____________________________________________________________
consensus             ACCTGAAAGATGGTCTTTGCTGTCCATGGGACGTCCCAAGGTTCACCAATCACTCTACGT
 
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JMSF031F14+           ACTATATTTGGTGCCTCTGCAAGAAGTGAAATCCAATCTCTTTTCCGAACACTTGATTTA
                      ____________________________________________________________
consensus             ACTATATTTGGTGCCTCTGCAAGAAGTGAAATCCAATCTCTTTTCCGAACACTTGATTTA
 
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JMSF031F14+           TCAATTTCTGACTTTCTTTGTTCTTCCTGCAGAACCTCCTCAATCACCTCAGGGTTGGAT
                      ____________________________________________________________
consensus             TCAATTTCTGACTTTCTTTGTTCTTCCTGCAGAACCTCCTCAATCACCTCAGGGTTGGAT
 
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JMSF031F14+           TCACCAGAACAAAATTCTTCATTCCTAAAGCATGAAATTTTCCATTTCTTTCTAGTAAGG
                      ____________________________________________________________
consensus             TCACCAGAACAAAATTCTTCATTCCTAAAGCATGAAATTTTCCATTTCTTTCTAGTAAGG
 
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JMSF031F14+           CGTTGATGGGTTTCGCAGAATCGAGAGGTTTGGGGGAGGAGAGATATGGATTTGGGAGCA
JMSF013N24+                                                 GAGAGATATGGATTTGGGAGCA
                      ____________________________________________________________
consensus             CGTTGATGGGTTTCGCAGAATCGAGAGGTTTGGGGGAGGAGAGATATGGATTTGGGAGCA
 
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JMSF031F14+           AATTTTGAAACCCTGAAATTAGGGATTGAAGAGGAAAGGAGAGAGGGTCGGGGAAGAGAG
JMSF013N24+           AATTTTGAAACCCTGAAATTAGGGATTGAAGAGGAAAGGAGAGAGGGTCGGGGAA--GAG
                      ____________________________________________________________
consensus             AATTTTGAAACCCTGAAATTAGGGATTGAAGAGGAAAGGAGAGAGGGTCGGGGAAGAGAG
 
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JMSF031F14+           CGAACGGAATTCGAAGCCAGCATCAGCCCAATCTGAGTATTCTGATTATAAGAATACTGA
JMSF013N24+           CGAACGGAATTCGAAGCCAGCATCAGCCCAATCTGAGTATTCTGATTATAAGAATACTGA
                      ____________________________________________________________
consensus             CGAACGGAATTCGAAGCCAGCATCAGCCCAATCTGAGTATTCTGATTATAAGAATACTGA
 
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JMSF031F14+           GACGAGGAAGAAGAAGAAAAAGCCCTAAATTTCAGAAAACAAGGAGTGATTGGAATTGAA
JMSF013N24+           GACGAGGAAGAAGAAGAAAAAGCCCTAAATTTCAGAAAACAAGGAGTGATTGGAATTGAA
                      ____________________________________________________________
consensus             GACGAGGAAGAAGAAGAAAAAGCCCTAAATTTCAGAAAACAAGGAGTGATTGGAATTGAA
 
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JMSF031F14+           GCCATCCTTATTTAGCATTTCATTGTTCTTCAGCACCTTCCTATTTCTTTCCC       
JMSF013N24+           GCCATCCTTATTTAGCATTTCATTGTTCTTCAGCACCTTCCTATTTCTTTCCCAAACACC
                      ____________________________________________________________
consensus             GCCATCCTTATTTAGCATTTCATTGTTCTTCAGCACCTTCCTATTTCTTTCCCAAACACC