Contig 007814:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013N24Sequence260007814 (2)743008752 (6)ref|XP_009630290.1|234PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis]
JMSF031F14Sequence631007814 (2)ref|XP_009630290.1|203PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis]702008752 (6)ref|XP_009630290.1|206PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031F14+ AAACGTCAATGATTCTTTGCTAAAACCCACCAAGTGC
                      ____________________________________________________________
consensus AAACGTCAATGATTCTTTGCTAAAACCCACCAAGTGC
 
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JMSF031F14+ GCTCCAAAAGGAATCATCCACGAACCAATAAACCAGAAGGACACAATCCAAAGGAGCATA
                      ____________________________________________________________
consensus GCTCCAAAAGGAATCATCCACGAACCAATAAACCAGAAGGACACAATCCAAAGGAGCATA
 
. : . : . : . : . : . :
JMSF031F14+ ACCTGAAAGATGGTCTTTGCTGTCCATGGGACGTCCCAAGGTTCACCAATCACTCTACGT
                      ____________________________________________________________
consensus ACCTGAAAGATGGTCTTTGCTGTCCATGGGACGTCCCAAGGTTCACCAATCACTCTACGT
 
. : . : . : . : . : . :
JMSF031F14+ ACTATATTTGGTGCCTCTGCAAGAAGTGAAATCCAATCTCTTTTCCGAACACTTGATTTA
                      ____________________________________________________________
consensus ACTATATTTGGTGCCTCTGCAAGAAGTGAAATCCAATCTCTTTTCCGAACACTTGATTTA
 
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JMSF031F14+ TCAATTTCTGACTTTCTTTGTTCTTCCTGCAGAACCTCCTCAATCACCTCAGGGTTGGAT
                      ____________________________________________________________
consensus TCAATTTCTGACTTTCTTTGTTCTTCCTGCAGAACCTCCTCAATCACCTCAGGGTTGGAT
 
. : . : . : . : . : . :
JMSF031F14+ TCACCAGAACAAAATTCTTCATTCCTAAAGCATGAAATTTTCCATTTCTTTCTAGTAAGG
                      ____________________________________________________________
consensus TCACCAGAACAAAATTCTTCATTCCTAAAGCATGAAATTTTCCATTTCTTTCTAGTAAGG
 
. : . : . : . : . : . :
JMSF031F14+ CGTTGATGGGTTTCGCAGAATCGAGAGGTTTGGGGGAGGAGAGATATGGATTTGGGAGCA
JMSF013N24+ GAGAGATATGGATTTGGGAGCA
                      ____________________________________________________________
consensus CGTTGATGGGTTTCGCAGAATCGAGAGGTTTGGGGGAGGAGAGATATGGATTTGGGAGCA
 
. : . : . : . : . : . :
JMSF031F14+ AATTTTGAAACCCTGAAATTAGGGATTGAAGAGGAAAGGAGAGAGGGTCGGGGAAGAGAG
JMSF013N24+ AATTTTGAAACCCTGAAATTAGGGATTGAAGAGGAAAGGAGAGAGGGTCGGGGAA--GAG
                      ____________________________________________________________
consensus AATTTTGAAACCCTGAAATTAGGGATTGAAGAGGAAAGGAGAGAGGGTCGGGGAAGAGAG
 
. : . : . : . : . : . :
JMSF031F14+ CGAACGGAATTCGAAGCCAGCATCAGCCCAATCTGAGTATTCTGATTATAAGAATACTGA
JMSF013N24+ CGAACGGAATTCGAAGCCAGCATCAGCCCAATCTGAGTATTCTGATTATAAGAATACTGA
                      ____________________________________________________________
consensus CGAACGGAATTCGAAGCCAGCATCAGCCCAATCTGAGTATTCTGATTATAAGAATACTGA
 
. : . : . : . : . : . :
JMSF031F14+ GACGAGGAAGAAGAAGAAAAAGCCCTAAATTTCAGAAAACAAGGAGTGATTGGAATTGAA
JMSF013N24+ GACGAGGAAGAAGAAGAAAAAGCCCTAAATTTCAGAAAACAAGGAGTGATTGGAATTGAA
                      ____________________________________________________________
consensus GACGAGGAAGAAGAAGAAAAAGCCCTAAATTTCAGAAAACAAGGAGTGATTGGAATTGAA
 
. : . : . : . : . : . :
JMSF031F14+ GCCATCCTTATTTAGCATTTCATTGTTCTTCAGCACCTTCCTATTTCTTTCCC
JMSF013N24+ GCCATCCTTATTTAGCATTTCATTGTTCTTCAGCACCTTCCTATTTCTTTCCCAAACACC
                      ____________________________________________________________
consensus GCCATCCTTATTTAGCATTTCATTGTTCTTCAGCACCTTCCTATTTCTTTCCCAAACACC