Contig 007808:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-                                                   ATGAAATAGTCACCATGGT
                      ____________________________________________________________
consensus                                                      ATGAAATAGTCACCATGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          AAACTAATTATCAAAAGAAACCGTGCAAAGATGTATGTGATTTACACTTTCTTAGTTGAT
                      ____________________________________________________________
consensus             AAACTAATTATCAAAAGAAACCGTGCAAAGATGTATGTGATTTACACTTTCTTAGTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          TTTGTACTGACTATATATTTACATGTCTTAAGAGCAACTAAGCATGATATCAAAGCTTTT
                      ____________________________________________________________
consensus             TTTGTACTGACTATATATTTACATGTCTTAAGAGCAACTAAGCATGATATCAAAGCTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          AGTAAGGGTTAACACGTTGACAGCGCACCCAGAAAGCTGTTCCTCCACTTCTGCCTCGAG
                      ____________________________________________________________
consensus             AGTAAGGGTTAACACGTTGACAGCGCACCCAGAAAGCTGTTCCTCCACTTCTGCCTCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          CAATAGCTATTTCTTCATCAATGTAAAACCAGACAAAGAATGGATCCTTTCCCTTATTGG
                      ____________________________________________________________
consensus             CAATAGCTATTTCTTCATCAATGTAAAACCAGACAAAGAATGGATCCTTTCCCTTATTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          TTGGCTCCCTGTCATCTTTTCCTTTCAAACTGATCTCGAACGGGTTCAATGGTCCAACTT
                      ____________________________________________________________
consensus             TTGGCTCCCTGTCATCTTTTCCTTTCAAACTGATCTCGAACGGGTTCAATGGTCCAACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          TTATCCGTAGCCTCTCAAATATGAACGCAAGGATTCTATTGTTCCACGAAAACCTCCCTT
                      ____________________________________________________________
consensus             TTATCCGTAGCCTCTCAAATATGAACGCAAGGATTCTATTGTTCCACGAAAACCTCCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          CAAATGTCAAGTTTCCAAAAGGCCCCAGGTAAACTCCATTCTCAATCCTCTTTGCGGCTG
                      ____________________________________________________________
consensus             CAAATGTCAAGTTTCCAAAAGGCCCCAGGTAAACTCCATTCTCAATCCTCTTTGCGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          CATCAAATCTCTGAACAGCAGTAATCGGGAAATATTTTCCTCGTTCTAATCCTTTCTCTG
JMSF012O13+                                                                    CTG
                      ____________________________________________________________
consensus             CATCAAATCTCTGAACAGCAGTAATCGGGAAATATTTTCCTCGTTCTAATCCTTTCTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          CAGTAAAAATGAGCATCCAGGTTCGCCCCGGTGATTCAGTTCCACCAAGAGTTTCAAGAA
JMSF012O13+           CAGTAAAAATGAGCATCCAGGTTCGCCCCGGTGATTCAGTTCCACCAAGAGTTTCAAGAA
                      ____________________________________________________________
consensus             CAGTAAAAATGAGCATCCAGGTTCGCCCCGGTGATTCAGTTCCACCAAGAGTTTCAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          ACCCCGAAGAATCAATCTTGGCCTTCTCAATCACAGAAAATGCAGCCAGGATCTCTTCAG
JMSF012O13+           ACCCCGAAGAATCAATCTTGGCCTTCTCAATCACAGAAAATGCAGCCAGGATCTCTTCAG
                      ____________________________________________________________
consensus             ACCCCGAAGAATCAATCTTGGCCTTCTCAATCACAGAAAATGCAGCCAGGATCTCTTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          ATGGAACCTTTCTTGTTCTGGCTGCATTTTTAAGAACTCTCACACTCTCCTCAACTTCCT
JMSF012O13+           ATGGAACCTTTCTTGTTCTGGCTGCATTTTTAAGAACTCTCACACTCTCCTCAACTTCCT
                      ____________________________________________________________
consensus             ATGGAACCTTTCTTGTTCTGGCTGCATTTTTAAGAACTCTCACACTCTCCTCAACTTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          GGTTGGGCTGTTTCTTCTTTGATTCTTCTTGAACAAGAAGTGGGGTGTTGGAAATTTGGT
JMSF012O13+           GGTTGGGCTGTTTCTTCTTTGATTCTTCTTGAACAAGAAGTGGGGTGTTGGAAATTTGGT
                      ____________________________________________________________
consensus             GGTTGGGCTGTTTCTTCTTTGATTCTTCTTGAACAAGAAGTGGGGTGTTGGAAATTTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012O13-          CC                                                          
JMSF012O13+           CCCTTCCATCAGCAGTGGCTCTGGTCTTTAGTGTTGGGAAGCTAAGAGGAATTTCCGATT
                      ____________________________________________________________
consensus             CCCTTCCATCAGCAGTGGCTCTGGTCTTTAGTGTTGGGAAGCTAAGAGGAATTTCCGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012O13+           TTATATGCAAAGGGGTTTGGAGATAAGAACTTGAGGATTTGGGAAAGGCATGAGGGGAGG
                      ____________________________________________________________
consensus             TTATATGCAAAGGGGTTTGGAGATAAGAACTTGAGGATTTGGGAAAGGCATGAGGGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012O13+           GATTGAGTGGCAGCAAGGCCAAGGAGGAGCAGGAAGAGAGCAACCCCATTATTAGTGACC
                      ____________________________________________________________
consensus             GATTGAGTGGCAGCAAGGCCAAGGAGGAGCAGGAAGAGAGCAACCCCATTATTAGTGACC