| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003M16 | Sequence | 623 | 007805 (9) | emb|CDO97825.1| | 3e-103 | unnamed protein product [Coffea canephora] | |||||
| JMFF009D15 | Sequence | 489 | 007805 (9) | ref|XP_010459324.1| | 1e-64 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | |||||
| JMFF010F22 | Sequence | 581 | 007805 (9) | ref|XP_010459324.1| | 5e-74 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 726 | 009921 (6) | gb|KDP40672.1| | 3e-77 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMFF010O10 | Sequence | 495 | 007805 (9) | ref|XP_010459324.1| | 4e-66 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 779 | 009921 (6) | gb|KDP40672.1| | 6e-89 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMFF015O17 | Sequence | 495 | 007805 (9) | ref|XP_010459324.1| | 4e-66 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 657 | 009921 (6) | gb|KDP40672.1| | 6e-61 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMFF023C06 | Sequence | 479 | 007805 (9) | ref|XP_010459324.1| | 3e-66 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | |||||
| JMSF012G22 | Sequence | 461 | 007805 (9) | ref|XP_006465882.1| | 7e-44 | PREDICTED: nucleolysin TIAR-like [Citrus sinensis] | 759 | 009921 (6) | gb|KDP40672.1| | 1e-80 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMSF013P21 | Sequence | 301 | 007805 (9) | ref|XP_010459324.1| | 3e-15 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 603 | 009921 (6) | gb|KDP40672.1| | 8e-50 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMSF030N20 | Sequence | 624 | 007805 (9) | emb|CDO97825.1| | 4e-105 | unnamed protein product [Coffea canephora] | 646 | 009921 (6) | gb|KDP40672.1| | 3e-64 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
JMSF030N20+ CCTAGAGCGCCCAGTCTTCTGATCCCACATGATTCTT
JMFF003M16+ TAGAGCGCCCAGTCTTCTGATCCCACATGATTCTT
____________________________________________________________
consensus CCTAGAGCGCCCAGTCTTCTGATCCCACATGATTCTT
. : . : . : . : . : . :
JMSF030N20+ GCATCAGAACAGCTAGGGAATGTGGAGAAGCAAGCAAATAACATGGCATCAGTAACTTCA
JMFF003M16+ GCATCAGAACAGCTAGGGAATGTGGAGAAGCAAGCAAATAACATGGCATCAGTAACTTCA
____________________________________________________________
consensus GCATCAGAACAGCTAGGGAATGTGGAGAAGCAAGCAAATAACATGGCATCAGTAACTTCA
. : . : . : . : . : . :
JMSF030N20+ GGGCTGAGGTCACCTACAAATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
JMFF003M16+ GGGCTGAGGTCACCTACAAATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
JMFF015O17+ TCTGACCACTA
JMFF010O10+ TCTGACCACTA
JMFF009D15+ CACTA
JMFF023C06+ CTCTGACCACTA
JMFF010F22+ AATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
____________________________________________________________
consensus GGGCTGAGGTCACCTACAAATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
. : . : . : . : . : . :
JMSF030N20+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF003M16+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF015O17+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF010O10+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF009D15+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF023C06+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF010F22+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
____________________________________________________________
consensus GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
. : . : . : . : . : . :
JMSF030N20+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF003M16+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF015O17+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF010O10+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF009D15+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF023C06+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF010F22+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMSF012G22+ TACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
____________________________________________________________
consensus ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
. : . : . : . : . : . :
JMSF030N20+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF003M16+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF015O17+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF010O10+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF009D15+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF023C06+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF010F22+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMSF012G22+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
____________________________________________________________
consensus TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
. : . : . : . : . : . :
JMSF030N20+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF003M16+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF015O17+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF010O10+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF009D15+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF023C06+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMSF013P21+ CCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF010F22+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMSF012G22+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
____________________________________________________________
consensus GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
. : . : . : . : . : . :
JMSF030N20+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCTGAGGAGCAGCTAAGAGGCCC
JMFF003M16+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF015O17+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF010O10+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF009D15+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF023C06+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMSF013P21+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF010F22+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMSF012G22+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
____________________________________________________________
consensus AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
. : . : . : . : . : . :
JMSF030N20+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF003M16+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF015O17+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF010O10+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF009D15+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF023C06+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMSF013P21+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF010F22+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMSF012G22+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
____________________________________________________________
consensus GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
. : . : . : . : . : . :
JMSF030N20+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF003M16+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF015O17+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF010O10+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF009D15+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF023C06+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMSF013P21+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF010F22+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMSF012G22+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
____________________________________________________________
consensus TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
. : . : . : . : . : . :
JMSF030N20+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGA
JMFF003M16+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACC
JMFF015O17+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF010O10+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF009D15+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF023C06+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACC
JMSF013P21+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF010F22+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMSF012G22+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
____________________________________________________________
consensus TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
. : . : . : . : . : . :
JMFF015O17+ TTCC
JMFF010O10+ TTCC
JMFF009D15+ TTCC
JMSF013P21+ TTCCGAGAGTATGTTAAAAGTGAGAG
JMFF010F22+ TTCCGAGAGTATGTTAAAAGTGAGAGAGAGAAAAATATACAAAAGAAAAAAGTGAAAAT
JMSF012G22+ TTCCGAGAGTATGTTAAAAGTGAGAGAGAGAAAAATATACAAAAGAAAAAAGTGAAAATC
____________________________________________________________
consensus TTCCGAGAGTATGTTAAAAGTGAGAGAGAGAAAAATATACAAAAGAAAAAAGTGAAAATC