| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024E10 | Sequence | 349 | 007801 (8) | ref|XP_009619105.1| | 4e-55 | PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | 767 | 007801 (8) | ref|XP_007148193.1| | 7e-93 | hypothetical protein PHAVU_006G187900g [Phaseolus vulgaris] ref|XP_007148194.1| |
| JMFN020O18 | Sequence | 546 | 007801 (8) | ref|XP_002509486.1| | 6e-71 | NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus communis] gb|EEF50873 | |||||
| JMFN035N11 | Sequence | 639 | 007801 (8) | ref|NP_001275342.1| | 5e-124 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like [Sola | |||||
| JMSF002A18 | Sequence | 222 | 007801 (8) | ref|XP_009619105.1| | 2e-11 | PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | 749 | 007801 (8) | gb|EPS64592.1| | 5e-121 | hypothetical protein M569_10189, partial [Genlisea aurea] |
| JMSF012C23 | Sequence | 236 | 007801 (8) | ref|XP_009619105.1| | 2e-13 | PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | 728 | 007801 (8) | gb|EPS64592.1| | 1e-117 | hypothetical protein M569_10189, partial [Genlisea aurea] |
This contig is upended
. : . : . : . : . : . :
rJMFF024E10- GNATGGGATTGATTATGCAGGTC
____________________________________________________________
consensus GNATGGGATTGATTATGCAGGTC
. : . : . : . : . : . :
rJMFF024E10- CAGACTCCAGAACTGCAAGGCAGCTACCACCTTTACATTGCTATTATTTCCTACTTAAAA
____________________________________________________________
consensus CAGACTCCAGAACTGCAAGGCAGCTACCACCTTTACATTGCTATTATTTCCTACTTAAAA
. : . : . : . : . : . :
rJMFF024E10- CCCTTCCAAAGATTGGGTATACAAGAGGAACTAGATCAATGAACAAAAGATGTGTGTTGC
____________________________________________________________
consensus CCCTTCCAAAGATTGGGTATACAAGAGGAACTAGATCAATGAACAAAAGATGTGTGTTGC
. : . : . : . : . : . :
JMFN020O18+ ACATTAAGTATATGATTTTTGGATCAAATGTCTAAAAGACAAAATCATAGCTATCTCC
rJMFF024E10- CAACATTAAGTATATGATTTTTGGATCAAATGTCTAAAAGACAAAATCATAGCTATCTCC
rJMSF012C23- TATATGATTTTTGGATCAAATGTCTAAAAGACAAAATCATAGCTATCTCC
rJMSF002A18- ACATTAAGTATATGATTTTTGGATCAAATGTCTAAAAGACAAAATCATAGCTATCTCC
____________________________________________________________
consensus CAACATTAAGTATATGATTTTTGGATCAAATGTCTAAAAGACAAAATCATAGCTATCTCC
. : . : . : . : . : . :
JMFN020O18+ AGCATTAGGGAAGGAAAAAAGAACAAAGCATAGCAAGGATAAACAAATCCTTTTATTTAT
rJMFF024E10- AGCATTAGGGAAGGAAAAAAGAACAAAGCATAGCAAGGATAAACAAATCCTTTTATTTAT
rJMSF012C23- AGCATTAGGGAAGGAAAAAAGAACAAAGCATAGCAAGGATAAACAAATCCTTTTATTTAT
rJMSF002A18- AGCATTAGGGAAGGAAAAAAGAACAAAGCATAGCAAGGATAAACAAATCCTTTTATTTAT
____________________________________________________________
consensus AGCATTAGGGAAGGAAAAAAGAACAAAGCATAGCAAGGATAAACAAATCCTTTTATTTAT
. : . : . : . : . : . :
JMFN020O18+ CATGGTCCTCATGCAAGTGAATCCAAGTTTATGTTCTTGCAGCGAAGGATCACTCAACGA
rJMFF024E10- CATGGTCCTCATGCAAGTGAATCCAAGTTTATGTTCTTGCAGCGAAGGATCACTCAACGA
rJMSF012C23- CATGGTCCTCATGCAAGTGAATCCAAGTTTATGTTCTTGCAGCGAAGGATCACTCAACGA
rJMSF002A18- CATGGTCCTCATGCAAGTGAATCCAAGTTTATGTTCTTGCAGCGAAGGATCACTCAACGA
____________________________________________________________
consensus CATGGTCCTCATGCAAGTGAATCCAAGTTTATGTTCTTGCAGCGAAGGATCACTCAACGA
. : . : . : . : . : . :
JMFN020O18+ TAGAGACTTTCGGATCTCAGATTCTCTGCAATCTCAGTTTCCCAACGGTCACCATTCTCG
rJMFF024E10- TAGAGACTTTCGGATCTCAGATTCTCTGCAATCTCAGTTTCCCAACGGTCACCATTCTCG
rJMSF012C23- TAGAGACTTTCGGATCTCAGATTCTCTGCAATCTCAGTTTCCCAACGGTCACCATTCTCG
rJMSF002A18- TAGAGACTTTCGGATCTAAGATTCTCTGCAATCTCAGTTTCCCAACGGTCACCATTCTCG
____________________________________________________________
consensus TAGAGACTTTCGGATCTCAGATTCTCTGCAATCTCAGTTTCCCAACGGTCACCATTCTCG
. : . : . : . : . : . :
JMFN020O18+ AGCAGCTTCTCTTTGTCATAAAGAAGTTCCTCATGAGTCTCTGTTGCAAATTCAAAGTTG
rJMFF024E10- AGCAGCTTCTCTTTGTCATAAAGAAGTTCCTCATGAGTCTCTGTTGCAAATTCAAAGTTG
rJMSF012C23- AGCAGCTTCTCTTTGTCATAAAGAAGTTCCTCATGAGTCTCTGTTGCAAATTCAAAGTTG
rJMSF002A18- AGCAGCTTCTCTTTGTCATAAAGAAGTTCCTCATGAGTCTCTGTTGCAAATTCAAAGTTG
JMFN035N11+ TG
____________________________________________________________
consensus AGCAGCTTCTCTTTGTCATAAAGAAGTTCCTCATGAGTCTCTGTTGCAAATTCAAAGTTG
. : . : . : . : . : . :
JMFN020O18+ GGCCCTTCAACAATGGCATCGACGGGGCAAGCCTCTTGGCAAAATCCACAGTAGATGCAT
rJMFF024E10- GGCCCTTCAACAATGGCATCGACGGGGCAAGCCTCTTGGCAAAATCCACAGTAGATGCAT
rJMSF012C23- GGCCCTTCAACAATGGCATCGACGGGGCAAGCCTCTTGGCAAAATCCACAGTAGATGCAT
rJMSF002A18- GGCCCTTCAACAATGGCATCGACGGGGCAAGCCTCTTGGCAAAATCCACAGTAGATGCAT
JMFN035N11+ GGCCCTTCAACAATGGCATCGACGGGGCAAGCCTCTTGGCAAAATCCACAGTAGATGCAT
____________________________________________________________
consensus GGCCCTTCAACAATGGCATCGACGGGGCAAGCCTCTTGGCAAAATCCACAGTAGATGCAT
. : . : . : . : . : . :
JMFN020O18+ TTTGTCATGTCAATATCATACCTGGTAGTTCGTCGACTTCCATCTTCTCGCTCCTCAGCC
rJMFF024E10- TTTGTCATGTCAATATCATACCTGGTAGTTCGTCGACTTCCATCTTCTCGCTCCTCAGCC
rJMSF012C23- TTTGTCATGTCAATATCATACCTGGTAGTTCGTCGACTTCCATCTTCTCGCTCCTCAGCC
rJMSF002A18- TTTGTCATGTCAATATCATACCTGGTAGTTCGTCGACTTCCATCTTCTCGCTCCTCAGCC
JMFN035N11+ TTTGTCATGTCAATATCATACCTGGTAGTTCGTCGACTTCCATCTTCTCGCTCCTCAGCC
____________________________________________________________
consensus TTTGTCATGTCAATATCATACCTGGTAGTTCGTCGACTTCCATCTTCTCGCTCCTCAGCC
. : . : . : . : . : . :
JMFN020O18+ TCAATAGTGATAGCTTGAGCAGGACAAATAGCTTCACAAAGTTTGCAGGCAATACAACGT
rJMFF024E10- TCAATAGTGATAGCTTGAGCAGGACAAATAGCTTCACAAAGTTTGCAGGCAATACAACGT
rJMSF012C23- TCAATAGTGATAGCTTGAGCAGGACAAATAGCTTCACAAAGTTTGCAGGCAATACAACGT
rJMSF002A18- TCAATAGTGATAGCTTGAGCAGGACAAATAGCTTCACAAAGTTTGCAGGCAATACAACGT
JMFN035N11+ TCAATAGTGATAGCTTGAGCAGGACAAATAGCTTCACAAAGTTTGCAGGCAATACAACGT
____________________________________________________________
consensus TCAATAGTGATAGCTTGAGCAGGACAAATAGCTTCACAAAGTTTGCAGGCAATACAACGT
. : . : . : . : . : . :
JMFN020O18+ TCCTCTCCTGTTGGATAACGACGGAGGGCATGTTCTCCACGAAAGCGAGGGCT
rJMFF024E10- TCCTCTCCTGTTGGATAACGACGGAGGGCATGTTCTCCACGAAAGCGAGGGCTTAAAGGA
rJMSF012C23- TCCTCTCCTGTTGGATAACGACGGAGGGCATGTTCTCCACGAAAGCGAGGGCTTAAAGGA
rJMSF002A18- TCCTCTCCTGTTGGATAACGACGGAGGGCATGTTCTCCACGAAAGCGAGGGCTTAAAGGA
JMFN035N11+ TCCTCTCCTGTTGGATAACGACGGAGGGCATGTTCTCCACGAAAGCGAGGGCTTAAAGGA
____________________________________________________________
consensus TCCTCTCCTGTTGGATAACGACGGAGGGCATGTTCTCCACGAAAGCGAGGGCTTAAAGGA
. : . : . : . : . : . :
rJMFF024E10- CCCTTCTCAAATGGATAGTTGATAGTGACTTTCGTGTCAAAGAAGTACTTGAGTGTCAGC
rJMSF012C23- CCCTTCTCAAATGGATAGTTGATAGTGACTTTCGTGTCAAAGAAGTACTTGAGTGTCAGC
rJMSF002A18- CCCTTCTCAAATGGATAGTTGATAGTGACTTTCGTGTCAAAGAAGTACTTGAGTGTCAGC
JMFF024E10+ TTGATAGTGACTTTCGTGTCAAAGAAGTACTTGAGTGTCAGC
JMFN035N11+ CCCTTCTCAAATGGATAGTTGATAGTGACTTTCGTGTCAAAGAAGTACTTGAGTGTCAGC
____________________________________________________________
consensus CCCTTCTCAAATGGATAGTTGATAGTGACTTTCGTGTCAAAGAAGTACTTGAGTGTCAGC
. : . : . : . : . : . :
rJMFF024E10- ATCAGACCCCGAACCATTTCAGTC
rJMSF012C23- ATCAGACCCCGAACCATTTCAGTCAGAAATAGTGTATTAATGCTCCTCTCAAAAACAGAA
rJMSF002A18- ATCAGACCCCGAACCATTTCAGTCAGAAATAGTGTATTAATGCTCCTCTCAAAAACAGAA
JMFF024E10+ ATCAGACCCCGAACCATTTCAGTCAGAAATAGTGTATTAATGCTCCTCTCAAAAACAGAA
JMFN035N11+ ATCAGACCCCGAACCATTTCAGTCAGAAATAGTGTATTAATGCTCCTCTCAAAAACAGAA
____________________________________________________________
consensus ATCAGACCCCGAACCATTTCAGTCAGAAATAGTGTATTAATGCTCCTCTCAAAAACAGAA
. : . : . : . : . : . :
rJMSF012C23- TTCCAATCTTTTGACAGTTCTTTTGCAAGCTGCTCTCTCTCTTCATCATCTTTGTCAGTT
rJMSF002A18- TTCCAATCTTTTGACAGTTCTTTTGCAAGCTGCTCTCTCTCTNCATCATCTTTGTCAGTT
JMFF024E10+ TTCCAATCTTTTGACAGTTCTTTTGCAAGCTGCTCTCTCTCTTCATCATCTTTGTCAGTT
JMFN035N11+ TTCCAATCTTTTGACAGTTCTTTTGCAAGCTGCTCTCTCTCTTCATCATCTTTGTCAGTT
____________________________________________________________
consensus TTCCAATCTTTTGACAGTTCTTTTGCAAGCTGCTCTCTCTCTTCATCATCTTTGTCAGTT
. : . : . : . : . : . :
rJMSF012C23- GAAA
rJMSF002A18- GAAA
JMFF024E10+ GAAAACGAATGCTTTGTAGCAAATGATCGTGTACCATACAAGGTTCCATAATGGTTAGAG
JMFN035N11+ GAAAACGAATGCTTTATAGCAAATGATCGTGTACCATACAAGGTTCCATAATGGTTAGAG
JMSF002A18+ TAGCAAATGATCGTGTACCATACAAGGTTCCATAATGGTTAGAG
JMSF012C23+ ACGAATGCTTTGTAGCAAATGATCGTGTACCATACAAGGTTCCATAATGGTTAGAG
____________________________________________________________
consensus GAAAACGAATGCTTTGTAGCAAATGATCGTGTACCATACAAGGTTCCATAATGGTTAGAG
. : . : . : . : . : . :
JMFF024E10+ CCTTGTAATGCTTGTCCTGCCAAAACAAGCTGCCGAGAACGAAGCGCAGACATCGATTTA
JMFN035N11+ CCTTGTAATGCTTGTCCTGCCAAAACAAGCTGCCGAGAACGAAGCGCAGACATCGATTTA
JMSF002A18+ CCTTGTAATGCTTGTCCTGCCAAAACAAGCTGCCGAGAACGAAGCGCAGACATCGATTTA
JMSF012C23+ CCTTGTAATGCTTGTCCTGCCAAAACAAGCTGCCGAGAACGAAGCGCAGACATCGATTTA
____________________________________________________________
consensus CCTTGTAATGCTTGTCCTGCCAAAACAAGCTGCCGAGAACGAAGCGCAGACATCGATTTA
. : . : . : . : . : . :
JMFF024E10+ CGAGCTAAGATGAAAGCCATGGCCGATTCGATGCCGGAAAGATGCGAGGCGTTTCTCCGT
JMFN035N11+ CGAGCTAAGATGAAAGCCATGGCCGATTCGATGCCGGAAAGATGCGAGGCGTTTCTCCGT
JMSF002A18+ CGAGCTAAGATGAAAGCCATGGCCGATTCGATGCCGGAAAGATGCGAGGCGTTTCTCCGT
JMSF012C23+ CGAGCTAAGATGAAAGCCATGGCCGATTCGATGCCGGAAAGATGCGAGGCGTTTCTCCGT
____________________________________________________________
consensus CGAGCTAAGATGAAAGCCATGGCCGATTCGATGCCGGAAAGATGCGAGGCGTTTCTCCGT
. : . : . : . : . : . :
JMFF024E10+ TCAAGTC
JMFN035N11+ TCAAGTCCAGGGAGATCGGAAAAGGAGTGTGGAGTA
JMSF002A18+ TCAAGTCCAGGGAGATCGGAAAAGGAGTGTGGAGTATGTATGCCAGCGAGTCCGAT
JMSF012C23+ TCAAGTCCAGGGAGATCGGAAAAGGAGTGTGGAGTATGTATGCCAGCGAGTCCGATTGTC
____________________________________________________________
consensus TCAAGTCCAGGGAGATCGGAAAAGGAGTGTGGAGTATGTATGCCAGCGAGTCCGATTGTC