Contig 007800:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002J15Sequence540007800 (2)ref|XP_009623136.1|67.4PREDICTED: uncharacterized protein LOC104114398 [Nicotiana tomentosiformis]739012213 (2)ref|XP_008225647.1|58.9PREDICTED: uncharacterized protein LOC103325271 [Prunus mume]
JMSF012B08Sequence418007800 (2)603012213 (2)

Alignment

This contig is upended


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JMFF002J15+                       TTCGAATAGGCACCCTCTTGACCTTCCCCGCTATCATCAATTTCGTGG
                      ____________________________________________________________
consensus                         TTCGAATAGGCACCCTCTTGACCTTCCCCGCTATCATCAATTTCGTGG
 
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JMFF002J15+           GCATCCGTTGTGGCGATTGGGGTTCTGGGTGGTGAGGGCACTGGCGAGGTGGGCGGCAGA
                      ____________________________________________________________
consensus             GCATCCGTTGTGGCGATTGGGGTTCTGGGTGGTGAGGGCACTGGCGAGGTGGGCGGCAGA
 
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JMFF002J15+           GGCGTGGGGGATGGCGCCGGAGGGGGCAACGGCGACTGCGGCGGATCAAACGGCGGCGGT
                      ____________________________________________________________
consensus             GGCGTGGGGGATGGCGCCGGAGGGGGCAACGGCGACTGCGGCGGATCAAACGGCGGCGGT
 
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JMFF002J15+           GGCGGCGGCGGCTTCTTCTTGAAGCGGGGAGAGGGGGATGGCTTCTTGAAGCGGTCGCGA
                      ____________________________________________________________
consensus             GGCGGCGGCGGCTTCTTCTTGAAGCGGGGAGAGGGGGATGGCTTCTTGAAGCGGTCGCGA
 
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JMFF002J15+           TGATTGACGATGAGATCAACGAGGGAAGTGGGAAAGCCGGTCTCGACGACGAGAGGCGAG
                      ____________________________________________________________
consensus             TGATTGACGATGAGATCAACGAGGGAAGTGGGAAAGCCGGTCTCGACGACGAGAGGCGAG
 
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JMFF002J15+           GCGGCGTTCTTCCGGTGGTGAAATTGATCCTTCACCATTTGGGAAATTCTGCTGCTGCTC
                      ____________________________________________________________
consensus             GCGGCGTTCTTCCGGTGGTGAAATTGATCCTTCACCATTTGGGAAATTCTGCTGCTGCTC
 
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JMFF002J15+           TTCACCTTCTTCCATGGAAACCCCATATCCTCCTTCACTTCAACAATTCAACCCAACCCA
                      ____________________________________________________________
consensus             TTCACCTTCTTCCATGGAAACCCCATATCCTCCTTCACTTCAACAATTCAACCCAACCCA
 
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JMFF002J15+           ACAAGAAACAAGAAAACAATCCTCGTTCGTTTATGCAAACACCATTCAGGAATCATGGAT
JMSF012B08+               GAAACAAGAAAACCTTCCTCGTTCGTTTATGCAAACACCATTCAGGAATCATGGAT
                      ____________________________________________________________
consensus             ACAAGAAACAAGAAAACCTTCCTCGTTCGTTTATGCAAACACCATTCAGGAATCATGGAT
 
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JMFF002J15+           AAACATCATGTCTATAACAACAACAAGACGAAGAAAAAATCGAAAGATAATTGTGTGTTG
JMSF012B08+           AAACATCATGTCTATAACANCAACANGACGAAGAAAANATCGAAAGATAATTGTGTGTTG
                      ____________________________________________________________
consensus             AAACATCATGTCTATAACAACAACAAGACGAAGAAAAAATCGAAAGATAATTGTGTGTTG
 
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JMFF002J15+           GTGTGAGAATAC                                                
JMSF012B08+           GTGTGAGAATACGGAAATGAGATGATNCATTCATTATATATTTATATACATACATGGACA
                      ____________________________________________________________
consensus             GTGTGAGAATACGGAAATGAGATGATNCATTCATTATATATTTATATACATACATGGACA
 
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JMSF012B08+           CAGACAGTCTTGAGAGGCGGAGGGAGACTCTAAGGGATCATACAAACACTTGTTTACCAA
                      ____________________________________________________________
consensus             CAGACAGTCTTGAGAGGCGGAGGGAGACTCTAAGGGATCATACAAACACTTGTTTACCAA
 
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JMSF012B08+           ATATAGAGTTGAAGGAGAAAGATGGAGTGTGGTGGAGGAATCTTGAATGAACCCTNATAA
                      ____________________________________________________________
consensus             ATATAGAGTTGAAGGAGAAAGATGGAGTGTGGTGGAGGAATCTTGAATGAACCCTNATAA
 
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JMSF012B08+           ATCCAGAAGCACTTGCTCACTTCCGCGAAGAAGGAGGAGAGAGAAAGAAGGAAGCGCGGA
                      ____________________________________________________________
consensus             ATCCAGAAGCACTTGCTCACTTCCGCGAAGAAGGAGGAGAGAGAAAGAAGGAAGCGCGGA
 
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JMSF012B08+           GAGAGTGAGGTGTAAATAGAAGAGCAGAGCATGCCGGCCGACAAGTGAGTGTTGCCAACC
                      ____________________________________________________________
consensus             GAGAGTGAGGTGTAAATAGAAGAGCAGAGCATGCCGGCCGACAAGTGAGTGTTGCCAACC