Contig 007799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050F21Sequence623007799 (2)ref|XP_009589792.1|2e-87PREDICTED: poly(rC)-binding protein 4-like [Nicotiana tomentosiformis]604002791 (2)ref|XP_009764265.1|1e-12PREDICTED: poly(rC)-binding protein 4-like [Nicotiana sylvestris] ref|XP_0097642
JMSF012A09Sequence216007799 (2)718002791 (2)ref|XP_009764265.1|2e-12PREDICTED: poly(rC)-binding protein 4-like [Nicotiana sylvestris] ref|XP_0097642

Alignment

This contig is upended


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JMFF050F21+                                            GTTGAGCGAGAACCGTAACAGTAGCCC
                      ____________________________________________________________
consensus                                              GTTGAGCGAGAACCGTAACAGTAGCCC
 
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JMFF050F21+           CGGAAGAAATCCTCAAATTCTCAATATTTTGGCCAGACACCCCAATCAAACCACCTGCTT
                      ____________________________________________________________
consensus             CGGAAGAAATCCTCAAATTCTCAATATTTTGGCCAGACACCCCAATCAAACCACCTGCTT
 
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JMFF050F21+           GAGAACCAGCAATCAAAAACCTTACTGAATTTGCTGGCACATGCCCAGCACCAGCTTTCA
                      ____________________________________________________________
consensus             GAGAACCAGCAATCAAAAACCTTACTGAATTTGCTGGCACATGCCCAGCACCAGCTTTCA
 
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JMFF050F21+           TTGCTTCAATGTTGCTCTCATCATCCTTTAGAATTAATGTCACAATTTGATGAAGGGCAC
                      ____________________________________________________________
consensus             TTGCTTCAATGTTGCTCTCATCATCCTTTAGAATTAATGTCACAATTTGATGAAGGGCAC
 
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JMFF050F21+           TCTCAGCATCACAAAATGTGCCATCATTGTCTTTCGAACTGATGATGATAACCCTCTCTT
                      ____________________________________________________________
consensus             TCTCAGCATCACAAAATGTGCCATCATTGTCTTTCGAACTGATGATGATAACCCTCTCTT
 
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JMFF050F21+           CATGTCTAGATATGGCGTCGGCTATCTTAATTGTAGCCCTGGTCTCCTCTCGAATCTTCT
                      ____________________________________________________________
consensus             CATGTCTAGATATGGCGTCGGCTATCTTAATTGTAGCCCTGGTCTCCTCTCGAATCTTCT
 
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JMFF050F21+           GGATTCGATGCCCCACTTTACCAATAACCTTCCCGATCTGCTTCGACGGGACGATGATGC
                      ____________________________________________________________
consensus             GGATTCGATGCCCCACTTTACCAATAACCTTCCCGATCTGCTTCGACGGGACGATGATGC
 
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JMFF050F21+           GGTACACAATATCCTGGGAAACCTTTACGCGCTTTTTCAACGGCGGCACGACCTCCGCCG
JMSF012A09+                                   TTACGCGCTTTTTCAACGGCGGCACGACCTCCGCCG
                      ____________________________________________________________
consensus             GGTACACAATATCCTGGGAAACCTTTACGCGCTTTTTCAACGGCGGCACGACCTCCGCCG
 
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JMFF050F21+           AGGTGCCCGCCTCATCCGTCGCCTCAAAGGCATCCTCGTCGCGGCGGCGCTTTGCGGTTG
JMSF012A09+           AGGTGCCCGCCTCATCCGTCGCCTCAAAGGCATCCTCGTCGCGGCGGCGCTTTGCGGTTG
                      ____________________________________________________________
consensus             AGGTGCCCGCCTCATCCGTCGCCTCAAAGGCATCCTCGTCGCGGCGGCGCTTTGCGGTTG
 
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JMFF050F21+           TGGACTTGTACGGATCGTCCTCCGTCGATGGAGCTCCTGGTGGCGGAGGGTTAGGGTTTA
JMSF012A09+           TGGACTTGTACGGATCGTCCTCCGTCGATGGAGCTCCTGGTGGCGGAGGGTTAGGGTTTA
                      ____________________________________________________________
consensus             TGGACTTGTACGGATCGTCCTCCGTCGATGGAGCTCCTGGTGGCGGAGGGTTAGGGTTTA
 
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JMFF050F21+           GGCTGGTCTGGGTTGGCTGAGCTTGCTGAGCCATTGGTGGAGAGCGGTGCGAGCTT    
JMSF012A09+           GGCTGGTCTGGGTTGGCTGAGCTTGCTGAGCCATTGGTGGAGAGCGGTGCGAGCTTGAGC
                      ____________________________________________________________
consensus             GGCTGGTCTGGGTTGGCTGAGCTTGCTGAGCCATTGGTGGAGAGCGGTGCGAGCTTGAGC