| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP015D12 | Sequence | 441 | 007797 (7) | emb|CDP11432.1| | 6e-15 | unnamed protein product [Coffea canephora] | |||||
| JMFF038A03 | Sequence | 561 | 007797 (7) | ref|XP_003634523.1| | 130 | PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera] | 522 | 007797 (7) | ref|XP_003634523.1| | 131 | PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera] |
| JMFN041B21 | Sequence | 611 | 007797 (7) | ref|XP_003634523.1| | 130 | PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera] | |||||
| JMFN041D24 | Sequence | 556 | 007797 (7) | ref|XP_003634523.1| | 130 | PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera] | |||||
| JMSF011M17 | Sequence | 292 | 007797 (7) | ref|XP_002306717.1| | 2e-24 | hypothetical protein POPTR_0005s21760g [Populus trichocarpa] gb|EEE93713.1| hypo | 681 | 007797 (7) | ref|XP_003634523.1| | 130 | PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMCP015D12+ ACCAAA
rJMSF011M17- GTTACGAAGATCCGAACCAAA
____________________________________________________________
consensus GTTACGAAGATCCGAACCAAA
. : . : . : . : . : . :
JMFN041B21+ TATTGTATCTTACAATTCATTGGGAACAAAATTAAAA
JMCP015D12+ TCTACTTGAATGATAAGATTGATTATTGTATCTTACAATTCATTGGGAACAAAATTAAAA
rJMSF011M17- TCTACTTGAATGATAAGATTGATTATTGTATCTTACAATTCATTGGGAACAAAATTAAAA
____________________________________________________________
consensus TCTACTTGAATGATAAGATTGATTATTGTATCTTACAATTCATTGGGAACAAAATTAAAA
. : . : . : . : . : . :
JMFN041B21+ GAGTTGAAACACAAATTAAACCACTCAAAATGATCATCATCAGTAGATATATCCAAACAC
JMFN041D24+ CTCAAAATGATCATCATCAGTAGATATATCCAAACAC
JMFF038A03+ TATATCCAAACAC
JMCP015D12+ GAGTTGAAACACAAATTAAACCACTCAAAATGATCATCATCAGTAGATATATCCAAACAC
rJMSF011M17- GAGTTGAAACACAAATTAAACCACTCAAAATGATCATCATCAGTAGATATATCCAAACAC
____________________________________________________________
consensus GAGTTGAAACACAAATTAAACCACTCAAAATGATCATCATCAGTAGATATATCCAAACAC
. : . : . : . : . : . :
JMFN041B21+ CCCTATGAGGTAAAATTCACCGACGCAGTCTCTCGTTTCATACGATCATCAAAAACAAAA
JMFN041D24+ CCCTATGAGGTAAAATTCACCGACGCAGTCTCTCGTTTCATACGATCATCAAAAACAAAA
JMFF038A03+ CCCTATGAGGTAAAATTCACCGACGCAGTCTCTCGTTTCATACGATCATCAAAAACAAAA
rJMFF038A03- CACCGACGCAGTCTCTCGTTTCATACGATCATCAAAAACAAAA
JMCP015D12+ CCCTATGAGGTAAAATTCACCGACGCAGTCTCTCGTTTCATACGATCATCAAAAACAAAA
rJMSF011M17- CCCTATGAGGTAAAATTCACCGACGCAGTCTCTCGTTTCATACGATCATCAAAAACAAAA
____________________________________________________________
consensus CCCTATGAGGTAAAATTCACCGACGCAGTCTCTCGTTTCATACGATCATCAAAAACAAAA
. : . : . : . : . : . :
JMFN041B21+ ACAATATACGATGAGGATCGAAGGGAATGAAACCTTAGCTTAATTAGGAAAAAAAGAAGA
JMFN041D24+ ACAATATACGATGAGGATCGAAGGGAATGAAACCTTAGCTTAATTAGGAAAAAAAGAAGA
JMFF038A03+ ACAATATACGATGAGGATCGAAGGGAATGAAACCTTAGCTTAATTAGGAAAAAAAGAAGA
rJMFF038A03- ACAATATACGATGAGGATCGAAGGGAATGAAACCTTAGCTTAATTAGGAAAAAAAGAAGA
JMCP015D12+ ACAATATACGATGAGGATCGAAGGGAATGAAACCTTAGCTTAATTAGGAAAAAAAGAAGA
rJMSF011M17- ACAATATACGATGAGGATCGAAGGGAATGAAACCTTAGCTTAATTAGGAAAAAAAGAAGA
____________________________________________________________
consensus ACAATATACGATGAGGATCGAAGGGAATGAAACCTTAGCTTAATTAGGAAAAAAAGAAGA
. : . : . : . : . : . :
JMFN041B21+ AGATCGAGAAGAAAAACATTACATTTATATATATAGAGAGAGAGAGAGAGATTAAGGGTG
JMFN041D24+ AGATCGAGAAGAAAAACATTACATTTATATATATAGAGAGAGAGAGAGAGATTAAGGGTG
JMFF038A03+ AGATCGAGAAGAAAAACATTACATTTATATATATAGAGAGAGAGAGAGAGATTAAGGGTG
rJMFF038A03- AGATCGAGAAGAAAAACATTACATTTATATATATAGAGAGAGAGAGAGAGATTAAGGGTG
JMCP015D12+ AGATCGAGAAGAAAAACATTACATTTATATATATAGAGAGAGAGAGAGAGATTAAGGGTG
rJMSF011M17- AGATCGAGAAGAAAAACATTACATTTATATATATAGAGAGAGAGAGAGAGATTAAGGGTG
____________________________________________________________
consensus AGATCGAGAAGAAAAACATTACATTTATATATATAGAGAGAGAGAGAGAGATTAAGGGTG
. : . : . : . : . : . :
JMFN041B21+ ACTAGCTAGAGGCCATAACGAATATCGTTGAGTTTGGTCTTGATCCACTTGAAGCTTTCT
JMFN041D24+ ACTAGCTAGAGGCCATAACGAATATCGTTGAGTTTGGTCTTGATCCACTTGAAGCTTTCT
JMFF038A03+ ACTAGCTAGAGGCCATAACGAATATCGTTGAGTTTGGTCTTGATCCACTTGAAGCTTTCT
rJMFF038A03- ACTAGCTAGAGGCCATAACGAATATCGTTGAGTTTGGTCTTGATCCACTTGAAGCTTTCT
JMCP015D12+ ACTAGCTAGAGGCCATAACGAATATCGTTGAGTTTGGTCTTGATCCACTTGAAGCTTTCT
rJMSF011M17- ACTAGCTAGAGGCCATAACGAATATCGTTGAGTTTGGTCTTGATCCACTTGAAGCTTTCT
____________________________________________________________
consensus ACTAGCTAGAGGCCATAACGAATATCGTTGAGTTTGGTCTTGATCCACTTGAAGCTTTCT
. : . : . : . : . : . :
JMFN041B21+ CTAACAGTGGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
JMFN041D24+ CTAACAGTGGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
JMFF038A03+ CTAACAGTGGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
rJMFF038A03- CTAACAGTGGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
JMCP015D12+ CTAACAGTGGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
rJMSF011M17- CTAACAGTGGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
JMSF011M17+ GGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
____________________________________________________________
consensus CTAACAGTGGACTTAACTTTACCTTCAGTAGTGAAGGTGTTATAAGACGCAATTCTCTTC
. : . : . : . : . : . :
JMFN041B21+ TTCCTCTTCATCTCGGGATGGTTGGAGGGGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCG
JMFN041D24+ TTCCTCTTCATCTCGGGATGGTTGGAGGGGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCG
JMFF038A03+ TTCCTCTTCATCTCGGGATGGTTGGAGGGGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCG
rJMFF038A03- TTCCTCTTCATCTCGGGATGGTTGGAGGGGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCG
JMCP015D12+ TTCCTCTTCATCTC
rJMSF011M17- TTCCTCTTCATCTCGGGATGGTTGGAGGGGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCG
JMSF011M17+ TTCCTCTTCATCTCGGGATGGTTGGAGGGGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCG
____________________________________________________________
consensus TTCCTCTTCATCTCGGGATGGTTGGAGGGGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCG
. : . : . : . : . : . :
JMFN041B21+ TTGAAATTGTAGGTGTTAGAGCGGTCTTGGAACCCAAAGTCGGCGGAGTATTGTGGGAAT
JMFN041D24+ TTGAAATTGTAGGTGTTAGAGCGGTCTTGGAACCCAAAGTCGGCGGAGTATTGTGGGAAT
JMFF038A03+ TTGAAATTGTAGGTGTTAGAGCGGTCTTGGAACCCAAAGTCGGCGGAGTATTGTGGGAAT
rJMFF038A03- TTGAAATTGTAGGTGTTAGAGCGGTCTTGGAACCCAAAGTCGGCGGAGTATTGTGGGAAT
rJMSF011M17- TTGAAATTGTAGGTGTTAGAGCGGTCTTGGAACCCAAAGTCGGCGGAGTATTGTGGGAAT
JMSF011M17+ TTGAAATTGTAGGTGTTAGAGCGGTCTTGGAACCCAAAGTCGGCGGAGTATTGTGGGAAT
____________________________________________________________
consensus TTGAAATTGTAGGTGTTAGAGCGGTCTTGGAACCCAAAGTCGGCGGAGTATTGTGGGAAT
. : . : . : . : . : . :
JMFN041B21+ GATCTGCTCTTCTCCATACACTTTACTCGATCGATCTCCAACCTTCTTCTACCTACCGCG
JMFN041D24+ GATCTGCTCTTCTCCATACACTTTACTCGATCGATCTCCAACCTTCTTCTACCTACCGCG
JMFF038A03+ GATCTGCTCTTCTCCATACACTTTACTCGATCGATCTCCAACCTTCTTCTACCTACCGCG
rJMFF038A03- GATCTGCTCTTCTCCATACACTTTACTCGATCGATCTCCAACCTTCTTCTACCTACCGCG
rJMSF011M17- GATCTGCTCTTCTCCATACACTTTACTCGATCGATCTCCAACCTTCTTCTACCTACCGCG
JMSF011M17+ GATCTGCTCTTCTCCATACACTTTACTCGATCGATCTCCAACCTTCTTCTACCTACCGCG
____________________________________________________________
consensus GATCTGCTCTTCTCCATACACTTTACTCGATCGATCTCCAACCTTCTTCTACCTACCGCG
. : . : . : . : . : . :
JMFN041B21+ CTAGCTCTTCTCTTGGACTACTATGTACTATGTA
JMFN041D24+ CTAGCTCTTCTCTTGGACTACTATGTACTATGTAGCTAG
JMFF038A03+ CTAGCTCTTCTCTTGGACTACTATGTACTATGTAGCTAGCGTGTGGACGTTTGGTTTTC
rJMFF038A03- CTAGCTCTTCTCTTGGACTACTATGTACTATGTAGCTAGCGTGTGGACGTTTGGTTTTC
rJMSF011M17- CTAGCTCTTCTCTTGGACTACTATGTACTATGTAGCTAGCGTGTGGACGTTTGGTTTTC
JMSF011M17+ CTAGCTCTTCTCTTGGACTACTATGTACTATGTAGCTAGCGTGTGGACGTTTGGTTTTCC
____________________________________________________________
consensus CTAGCTCTTCTCTTGGACTACTATGTACTATGTAGCTAGCGTGTGGACGTTTGGTTTTCC