| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN020F13 | Sequence | 598 | 007795 (5) | ref|XP_009628846.1| | 84.3 | PREDICTED: uncharacterized protein LOC104119127 [Nicotiana tomentosiformis] | |||||
| JMSF008J07 | Sequence | 275 | 007795 (5) | ref|XP_009628846.1| | 75.5 | PREDICTED: uncharacterized protein LOC104119127 [Nicotiana tomentosiformis] | 600 | 007795 (5) | ref|XP_009628846.1| | 84.7 | PREDICTED: uncharacterized protein LOC104119127 [Nicotiana tomentosiformis] |
| JMSF011H12 | Sequence | 267 | 007795 (5) | ref|XP_009628846.1| | 67.8 | PREDICTED: uncharacterized protein LOC104119127 [Nicotiana tomentosiformis] | 426 | 007795 (5) | ref|XP_009628846.1| | 84.7 | PREDICTED: uncharacterized protein LOC104119127 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFN020F13+ CATGTATATATCAATAAATGCATCTTTCCCAAATACAAGAGCAAAAGTCT
rJMSF008J07- AAAGTCT
____________________________________________________________
consensus CATGTATATATCAATAAATGCATCTTTCCCAAATACAAGAGCAAAAGTCT
. : . : . : . : . : . :
JMFN020F13+ ACACTGCATATACAGTTTTGGTGTAATGGTCTGAGATAATCTCAAATTCTTCGGTTCCGT
rJMSF008J07- ACACTGCATATACAGTTTTGGTGTAATGGTCTGAGATAATCTCAAATTCTTCGGTTCCGT
____________________________________________________________
consensus ACACTGCATATACAGTTTTGGTGTAATGGTCTGAGATAATCTCAAATTCTTCGGTTCCGT
. : . : . : . : . : . :
JMFN020F13+ AAGTTAGGTATCTTAGAAGATCATCCGTCTCTTCTTCCTATTTGCTTAATGTGAAATTTG
rJMSF008J07- AAGTTAGGTATCTTAGAAGATCATCCGTCTCTTCTTCCTATTTGCTTAATGTGAAATTTG
____________________________________________________________
consensus AAGTTAGGTATCTTAGAAGATCATCCGTCTCTTCTTCCTATTTGCTTAATGTGAAATTTG
. : . : . : . : . : . :
JMFN020F13+ GGAAGACAGACCATCAAGCCATTCTCTGTTATTAGCGAGAAGAGTGTTTTACATGACAAC
rJMSF008J07- GGAAGACAGACCATCAAGCCATTCTCTGTTATTAGCGAGAAGAGTGTTTTACATGACAAC
rJMSF011H12- GACAAC
____________________________________________________________
consensus GGAAGACAGACCATCAAGCCATTCTCTGTTATTAGCGAGAAGAGTGTTTTACATGACAAC
. : . : . : . : . : . :
JMFN020F13+ TTGGAAATGAGTACACCAACGATTTAACAATTTGCAAAACTATTTCCTTCAAAAAGAAAC
rJMSF008J07- TTGGAAATGAGTACACCAACGATTTAACAATTTGCAAAACTATTTCCTTCAAAAAGAAAC
rJMSF011H12- TTGGAAATGAGTACACCAACGATTTAACAATTTGCAAAACTATTTCCTTCAAAAAGAAAC
____________________________________________________________
consensus TTGGAAATGAGTACACCAACGATTTAACAATTTGCAAAACTATTTCCTTCAAAAAGAAAC
. : . : . : . : . : . :
JMFN020F13+ ATTGCTTAAGTTTATTATCAAGTCCGAGTGATGCCCTAAACAGATCCAGCCCTTCACTTC
rJMSF008J07- ATTGCTTAAGTTTATTATCAAGTCCGAGTGATGCCCTAAACAGATCCAGCCCTTCACTTC
rJMSF011H12- ATTGCTTAAGTTTATTATCAAGTCCGAGTGATGCCCTAAACAGATCCAGCCCTTCACTTC
____________________________________________________________
consensus ATTGCTTAAGTTTATTATCAAGTCCGAGTGATGCCCTAAACAGATCCAGCCCTTCACTTC
. : . : . : . : . : . :
JMFN020F13+ TAATTCCCTTCGCCCTGGTGAGGCTCGGGGTTGTCTTGAAGCACAGTTTCGAGACTTGAG
rJMSF008J07- TAATTCCCTTCGCCCTGGTGAGGCTCGGGGTTGTCTTGAAGCACAGTTTCGAGACTTGAG
JMSF008J07+ GTGAGGCTCGGGGTTGTCTTGAAGCACAGTTTCGAGACTTGAG
rJMSF011H12- TAATTCCCTTCGCCCTGGTGAGGCTCGGGGTTGTCTTGAAGCACAGTTTCGAGACTTGAG
JMSF011H12+ TCTTGAAGCACAGTTTCGAGACTTGAG
____________________________________________________________
consensus TAATTCCCTTCGCCCTGGTGAGGCTCGGGGTTGTCTTGAAGCACAGTTTCGAGACTTGAG
. : . : . : . : . : . :
JMFN020F13+ ACTCTGCCTTCCAAGGCGCTGAATTTTTCTTTCAACTGTGAAGAAAGAAGGGTGCGATCG
rJMSF008J07- ACTCTGCCTTCCAAGGCGCTGAATTTTTCTTTCAACTGTGAAGAAAGAAGGGTGCGATCG
JMSF008J07+ ACTCTGCCTTCCAAGGCGCTGAATTTTTCTTTCAACTGTGAAGAAAGAAGGGTGCGATCG
rJMSF011H12- ACTCTGCCTTCCAAGGCGCTGAATTTTTCTTTCAACTGTGAAGAAAGAAGGGTGCGATCG
JMSF011H12+ ACTCTGCCTTCCAAGGCGCTGAATTTTTCTTTCAACTGTGAAGAAAGAAGGGTGCGATCG
____________________________________________________________
consensus ACTCTGCCTTCCAAGGCGCTGAATTTTTCTTTCAACTGTGAAGAAAGAAGGGTGCGATCG
. : . : . : . : . : . :
JMFN020F13+ ATTAAGAGATCCCTGAACACGAATTGAGCCATCAACGCCGAGGCAGACGAGAAGCCCAGC
rJMSF008J07- ATTAAGAGATCCCTGAACACGAATTGAGCCATCAACGCCGAGGCAGACGAGAAGCCCAGC
JMSF008J07+ ATTAAGAGATCCCTGAACACGAATTGAGCCATCAACGCCGAGGCAGACGAGAAGCCCAGC
rJMSF011H12- ATTAAGAGATCCCTGAACACGAATTGAGCCATCAACGCCGAGGCAGACGAGAAGCCCAGC
JMSF011H12+ ATTAAGAGATCCCTGAACACGAATTGAGCCATCAACGCCGAGGCAGACGAGAAGCCCAGC
____________________________________________________________
consensus ATTAAGAGATCCCTGAACACGAATTGAGCCATCAACGCCGAGGCAGACGAGAAGCCCAGC
. : . : . : . : . : . :
JMFN020F13+ GTGAACCACAGGAACCTTGTTCGCATCATCTTTCTTCTTCACTCTTCCTTCTCCGGTCTC
rJMSF008J07- GTGAACCACAGGAACCTTGTTCGCATCATCTTTCTTCTTCACTCTTCCTTCTCCGGTCTC
JMSF008J07+ GTGAACCACAGGAACCTTGTTCGCATCATCTTTCTTCTTCACTCTTCCTTCTCCGGTCTC
rJMSF011H12- GTGAACCACAGGAACCTTGTTCGCATCATCTTTCTTCTTCACTCTTCCTTCTCCGGTCTC
JMSF011H12+ GTGAACCACAGGAACCTTGTTCGCATCATCTTTCTTCTTCACTCTTCCTTCTCCGGTCTC
____________________________________________________________
consensus GTGAACCACAGGAACCTTGTTCGCATCATCTTTCTTCTTCACTCTTCCTTCTCCGGTCTC
. : . : . : . : . : . :
JMFN020F13+ CCTCTCCC
rJMSF008J07- CCTCTCCCTCCGTTATGGGTTTTTTCTACCGCTCGCCGCTCTCGCTTGCC
JMSF008J07+ CCTCTCCCTCCGTTATGGGTTTTTTCTACCGCTCGCCGCTCTCGCTTGCC
rJMSF011H12- CCTCTCCCTCCGTTATGGGTTTTTTCTACCGCTCGCCGCTCTCGCTTGCCTGTCCTCCCC
JMSF011H12+ CCTCTCCCTCCGTTATGGGTTTTTTCTACCGCTCGCCGCTCTCGCTTGCCTGTCCTCCCC
____________________________________________________________
consensus CCTCTCCCTCCGTTATGGGTTTTTTCTACCGCTCGCCGCTCTCGCTTGCCTGTCCTCCCC