Contig 007790:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038H15Sequence455007790 (3)ref|XP_009768441.1|5e-57PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris705002785 (3)ref|XP_009768441.1|1e-113PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris
JMSF011C01Sequence331007790 (3)ref|XP_009610375.1|3e-42PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana tomentosif760002785 (3)ref|XP_009768441.1|4e-97PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris
JMSF051L10Sequence678007790 (3)ref|XP_009768441.1|3e-95PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris787002785 (3)ref|XP_009768441.1|1e-104PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris

Alignment

This contig is upended


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JMSF051L10+                                                     CCAGTTCCAAAGTGACAG
                      ____________________________________________________________
consensus                                                       CCAGTTCCAAAGTGACAG
 
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JMSF051L10+           GAGTCAGGTGCTTGGCGGCGGCAGTCATAATGAGGCGCCCCACCGCTGCACTGCCTGTGA
                      ____________________________________________________________
consensus             GAGTCAGGTGCTTGGCGGCGGCAGTCATAATGAGGCGCCCCACCGCTGCACTGCCTGTGA
 
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JMSF051L10+           AGAAAATCTTGTCCCATTTATGCTCCAACAGCCTCTCAGCAACCAAACTCCCACCTTCAA
                      ____________________________________________________________
consensus             AGAAAATCTTGTCCCATTTATGCTCCAACAGCCTCTCAGCAACCAAACTCCCACCTTCAA
 
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JMSF051L10+           TGACCTTAAAAGCTTTAGGGTCTAAATAAGCAGGAATAGACTTGGCTATCACTGATGAAC
                      ____________________________________________________________
consensus             TGACCTTAAAAGCTTTAGGGTCTAAATAAGCAGGAATAGACTTGGCTATCACTGATGAAC
 
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JMFF038H15+                                 CTTAAGAACAGCAACACATCCTGCGGCTATAGCTCCGA
JMSF051L10+           ATGCCGGAGCCTGCTCTGACGGCTTAAGAACAGCAACACATCCTGCGGCTATAGCTCCGA
                      ____________________________________________________________
consensus             ATGCCGGAGCCTGCTCTGACGGCTTAAGAACAGCAACACATCCTGCGGCTATAGCTCCGA
 
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JMFF038H15+           TGATGGGTTCCAATGCTAACCCAATAGGGAGATTCCAAGCTGAAAAAATGAGGACTAAAC
JMSF051L10+           TGATGGGTTCCAATGCTAACCCAATAGGGAGATTCCAAGCTGAAAAAATGAGGACTAAAC
                      ____________________________________________________________
consensus             TGATGGGTTCCAATGCTAACCCAATAGGGAGATTCCAAGCTGAAAAAATGAGGACTAAAC
 
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JMFF038H15+           CCAGGGGTTCAGGAATTATCTCTGCTTTTGCAGGGAATGCAGCAATGGGTAGTTTGGCCT
JMSF051L10+           CCAGGGGTTCAGGAATTATCTCTGCTTTTGCAGGGAATGCAGCAATGGGTAGTTTGGCCT
JMSF011C01+                                        GCAGGGAATGCAGCAATGGGTAGTTTGGCCT
                      ____________________________________________________________
consensus             CCAGGGGTTCAGGAATTATCTCTGCTTTTGCAGGGAATGCAGCAATGGGTAGTTTGGCCT
 
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JMFF038H15+           TTTTACCAGACATCCAGCCCTTTAAGCCTGCCATGGCAAACTCTATAGACTTTACAAGTG
JMSF051L10+           TTTTACCAGACATCCAGCCCTTTAAGCCTGCCATGGCAAACTCTATAGACTTTACAAGTG
JMSF011C01+           TTTTACCAGACATCCAGCCCTTTAAGCCTGCCATGGCAAACTCTATAGACTTTACAAGTG
                      ____________________________________________________________
consensus             TTTTACCAGACATCCAGCCCTTTAAGCCTGCCATGGCAAACTCTATAGACTTTACAAGTG
 
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JMFF038H15+           GTCCAATCTCATCTCTGTAGGCTTCAACATGGTGTTTTCCCAGGTCTTGTTTGAGGGCCA
JMSF051L10+           GTCCAATCTCATCTCTGTAGGCTTCAACATGGTGTTTTCCCAGGTCTTGTTTGAGGGCCA
JMSF011C01+           GTCCAATCTCATCTCTGTAGGCTTCAACATGGTGTTTTCCCAGGTCTTGTTTGAGGGCCA
                      ____________________________________________________________
consensus             GTCCAATCTCATCTCTGTAGGCTTCAACATGGTGTTTTCCCAGGTCTTGTTTGAGGGCCA
 
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JMFF038H15+           TGGAGATGTCATCTTCTTTCTCCTGAACCAGTCTGAGCAAAGCTTTCAGCTGGGACCTCC
JMSF051L10+           TGGAGATGTCATCTTCTTTCTCCTGAACCAGTCTGAGCAAAGCTTTCAGCTGGGACCTCC
JMSF011C01+           TGGAGATGTCATCTTCTTTCTCCTGAACCAGTCTGAGCAAAGCTTTCAGCTGGGACCTCC
                      ____________________________________________________________
consensus             TGGAGATGTCATCTTCTTTCTCCTGAACCAGTCTGAGCAAAGCTTTCAGCTGGGACCTCC
 
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JMFF038H15+           TCCAAGATTCTTCCCTGGTTTTACCTGAACGGAATGTCTTCCTCAGCCCCTCCAAACTTG
JMSF051L10+           TCCAAGATTCTTCCCTGGTTTTACCTGAACGGAATGTCTTCCTCAGCCCCTCCAAACTTG
JMSF011C01+           TCCAAGATTCTTCCCTGGTTTTACCTGAACGGAATGTCTTCCTCAGCCCCTCCAAACTTG
                      ____________________________________________________________
consensus             TCCAAGATTCTTCCCTGGTTTTACCTGAACGGAATGTCTTCCTCAGCCCCTCCAAACTTG
 
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JMFF038H15+           CTCCAAAATCTTCCATGGATGCTCTGCTTTCTAGCTGCTTTTTATTTTCGGTAT      
JMSF051L10+           CTCCAAAATCTTCCATGGATGCTCTGCTTTCTAGCTGCTTTTTATTTTCTGTAT      
JMSF011C01+           CTCCAAAATCTTCCATGGATGCTCTGCTTTCTAGCTGCTTTTTATTTTCTGTATTGTGTC
                      ____________________________________________________________
consensus             CTCCAAAATCTTCCATGGATGCTCTGCTTTCTAGCTGCTTTTTATTTTCTGTATTGTGTC