| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF042K24 | Sequence | 622 | 007787 (12) | ref|XP_011079947.1| | 1e-115 | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Sesam | 552 | 007787 (12) | gb|EYU46512.1| | 5e-39 | hypothetical protein MIMGU_mgv1a012296mg [Erythranthe guttata] gb|EYU46513.1| hy |
| JMFN010A02 | Sequence | 625 | 007787 (12) | ref|XP_011079947.1| | 3e-122 | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Sesam | |||||
| JMFN012G14 | Sequence | 607 | 007787 (12) | gb|KJB22586.1| | 8e-110 | hypothetical protein B456_004G056700 [Gossypium raimondii] | |||||
| JMFN016D18 | Sequence | 224 | 007787 (12) | ref|XP_011079947.1| | 6e-22 | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Sesam | |||||
| JMFN046M07 | Sequence | 606 | 007787 (12) | gb|EYU46512.1| | 2e-60 | hypothetical protein MIMGU_mgv1a012296mg [Erythranthe guttata] gb|EYU46513.1| hy | |||||
| JMSF010I16 | Sequence | 367 | 007787 (12) | ref|XP_011079947.1| | 5e-34 | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Sesam | 191 | 007787 (12) | |||
| JMSF015P13 | Sequence | 454 | 007787 (12) | gb|KJB22586.1| | 6e-87 | hypothetical protein B456_004G056700 [Gossypium raimondii] | 177 | 007787 (12) | |||
| JMSF032O14 | Sequence | 691 | 007787 (12) | ref|XP_011079947.1| | 1e-131 | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Sesam | 204 | 007787 (12) | |||
This contig is upended
. : . : . : . : . : . :
rJMSF032O14- TTTTTATCCTCCATAAAT
rJMFF042K24- CGATGTGAACAGTGCCCAAGTTCTTTTTTATCCTCCATAAAT
JMFN046M07+ TTTTTATCCTCCATAAAT
____________________________________________________________
consensus CGATGTGAACAGTGCCCAAGTTCTTTTTTATCCTCCATAAAT
. : . : . : . : . : . :
rJMSF032O14- CATATAAGCAAAGTTTGTTCTCATCTCATTTCAAGTTATTTCACAACA-GGTTGTACACA
rJMSF015P13- AAGTTTGTTCTCATCTCATTTCAAGTTATTTCACAACA-GGTTGTACACG
rJMSF010I16- GTTCTCATCTCATTTCAAGTTATTTCACAACAGGGTTGTACACA
rJMFF042K24- CATATAAGCAAAGTTTGTTCTCATCTCATTTCAAGTTATTTCACAACA-GGTTGTACACA
JMFN046M07+ CATATAAGCAAAGTTNGTTCTCATCTCATTTCAAGTTATTTCACAACA-GGTTGTACACA
____________________________________________________________
consensus CATATAAGCAAAGTTTGTTCTCATCTCATTTCAAGTTATTTCACAACA-GGTTGTACACA
. : . : . : . : . : . :
rJMSF032O14- TAAACTGGCTTATGCGGCTAAACAAGACAGCCATAAATTCAACAATGAAGAAAATTCTAG
rJMSF015P13- TAAACTGGCTTATGCGGCTAAACAAGACAGCCATAAATTCAACAATGAAGAAAATTCTAG
rJMSF010I16- TAAACTGGCTTATGCGGCTAAACAAGACAGCCATAAATTCAACAATGAAGAAAATTCTAG
rJMFF042K24- TAAACTGGCTTATGCGGCTAAACAAGACAGCCATAAATTCAACAATGAAGAAAATTCTAG
JMFN046M07+ TAAACTGGCTTATGCGGCTAAACAAGACAGCCATAAATTCAACAATGAAGAAAATTCTAG
____________________________________________________________
consensus TAAACTGGCTTATGCGGCTAAACAAGACAGCCATAAATTCAACAATGAAGAAAATTCTAG
. : . : . : . : . : . :
rJMSF032O14- TGGGCATGTGTGCATACCAGCACGGGAATTAAGAGAACAAGCAAATAATCTTTTTTTTTT
rJMSF015P13- TGGGCATGTGTGCATACCAGCACGGGAATTAAGAGAACAAGCAAATAATCTTTTTTTTTT
rJMSF010I16- TGGGCATGTGTGCATACCAGCACGGGAATTAAGAGAACAAGCAAATAATCTTTTTTTTTT
rJMFF042K24- TGGGCATGTGTGCATACCAGCACGGGAATTAAGAGAACAAGCAAATAATCTTTTTTTTTT
JMFN046M07+ TGGGCATGTGTGCATACCAGCACGGGAATTAAGAGAACAAGCAAATAATCTTTTTTTTTT
____________________________________________________________
consensus TGGGCATGTGTGCATACCAGCACGGGAATTAAGAGAACAAGCAAATAATCTTTTTTTTTT
. : . : . : . : . : . :
rJMSF032O14- T
rJMSF015P13- T
rJMSF010I16- T
rJMFF042K24- TTCAGCTGCGTTGGATAATCAACAGCACACAATTGGGATGGATGCCCCTACAACATCCTA
JMFN046M07+ TTCAGCTGCGTTGGATAATCAACAGCACACAATTGGGATGGATGCCCCTACAACATCCTA
____________________________________________________________
consensus TTCAGCTGCGTTGGATAATCAACAGCACACAATTGGGATGGATGCCCCTACAACATCCTA
. : . : . : . : . : . :
rJMFF042K24- TTTAGCATTATTAGAATTTAGAAACACCAGAAAAAAAGAAACCGACTTTGATCAGCAGGC
JMFN046M07+ TTTAGCATTATTAGAATTTAGAAACACCAGAAAAAAAGAAACCGACTTTGATCAGCAGGC
____________________________________________________________
consensus TTTAGCATTATTAGAATTTAGAAACACCAGAAAAAAAGAAACCGACTTTGATCAGCAGGC
. : . : . : . : . : . :
rJMFF042K24- ATCAAGATCCCGACATGGTGGAGCCTTGGGCTCCCCTAACAATGTAGTGTTTCCTCCTTC
JMFN046M07+ ATCAAGATCCCGACATGGTGGAGCCTTGGGCTCCCCTAACAATGTAGTGTTTCCTCCTTC
____________________________________________________________
consensus ATCAAGATCCCGACATGGTGGAGCCTTGGGCTCCCCTAACAATGTAGTGTTTCCTCCTTC
. : . : . : . : . : . :
rJMFF042K24- TGGCCCAGAATTCTGACGTTGTGGATTTTGCGTGCCACGCTGTGGCTTTTCGCCTCTTCT
JMFN046M07+ TGGCCCAGAATTCTGACGTTGTGGATTTTGCGTGCCACGCTGTGGCTTTTCGCCTCTTCT
____________________________________________________________
consensus TGGCCCAGAATTCTGACGTTGTGGATTTTGCGTGCCACGCTGTGGCTTTTCGCCTCTTCT
. : . : . : . : . : . :
rJMFF042K24- AAATGCCTCCACAATTTCTACAACTCGTTTAGGAGTGAGATCTTCATAATAGTTGTAAGT
JMFN046M07+ AAATGCCTCCACAATTTCTACAACTCGTTTAGGAGTGAGATCTTCATAATAGTTGTAAGT
JMSF032O14+ TCTTCATAATAGTTGTAAGT
____________________________________________________________
consensus AAATGCCTCCACAATTTCTACAACTCGTTTAGGAGTGAGATCTTCATAATAGTTGTAAGT
. : . : . : . : . : . :
rJMFF042K24- ATATCCTTCAGATCCACTGGAGTAGTCAGCA
JMFN046M07+ ATATCCTTCAGATCCACTGGAGTAGTCAGCAACTGTAATCATTGGAGCATTTACACAGCA
JMFN010A02+ GTAGTCAGCAACTGTAATCATTGGAGCATTTACACAGCA
JMFF042K24+ GGAGCATTTACACAGCA
JMSF032O14+ ATATCCTTCAGATCCACTGGAGTAGTCAGCAACTGTAATCATTGGAGCACTTACACAGCA
____________________________________________________________
consensus ATATCCTTCAGATCCACTGGAGTAGTCAGCAACTGTAATCATTGGAGCATTTACACAGCA
. : . : . : . : . : . :
JMFN046M07+ CCCCATGCATTCCATCTCTCCAACAGAGAATAACCCATCTTTTGTCACT
JMFN010A02+ CCCCATGCATTCCATCTCTCCAACAGAGAATAACCCATCTTTTGTCACTTCATTGCGCTT
JMFF042K24+ CCCCATGCATTCCATCTCTCCAACAGAGAATAACCCATCTTTTGTCACTTCATTGCGCTT
JMSF032O14+ CCCCATGCATTCCATCTCTCCAACAGAGAATAACCCATCTTTTGTCACTTCATTGCGCTT
JMFN012G14+ GCATTCCATCTCTCCAACAGAGAATAACCCATCTTTTGTCACTTCATTGCGCTT
____________________________________________________________
consensus CCCCATGCATTCCATCTCTCCAACAGAGAATAACCCATCTTTTGTCACTTCATTGCGCTT
. : . : . : . : . : . :
JMFN010A02+ AACTCCAAGGTGTTTCAGCAATGCCTCTTCAATCTCTCTTGAACCACGTATCATACAAGG
JMSF015P13+ AACCACGTATCATACAAGG
JMFF042K24+ AACTCCAAGGTGTTTCAGCAATGCCTCTTCAATCTCTCTTGAACCACGTATCATACAAGG
JMSF032O14+ AACTCCAAGGTGTTTCAGCAATGCCTCTTCAATCTCTCTTGAACCACGTATCATACAAGG
JMFN012G14+ AACTCCAAGGTGTTTCAGCAATGCCTCTTCAATCTCTCTTGAACCACGTATCATACAAGG
____________________________________________________________
consensus AACTCCAAGGTGTTTCAGCAATGCCTCTTCAATCTCTCTTGAACCACGTATCATACAAGG
. : . : . : . : . : . :
JMFN010A02+ TGTTGTTCCACAAACCAAAAGGTGGTACTTGCCAACCTTTGCACGGTTGAACATGGAGTA
JMSF015P13+ TGTTGTTCCACAAACCAAAAGGTGGTACTTGCCAACCTTTGCACGGTTGAACATGGAGTA
JMFF042K24+ TGTTGTTCCACAAACCAAAAGGTGGTACTTGCCAACCTTTGCACGGTTGAACATGGAGTA
JMSF032O14+ TGTTGTTCCACAAACCAAAAGGTGGTACTTGCCAACCTTTGCACGGTTGAACATGGAGTA
JMFN012G14+ TGTTGTTCCACAAACCAAAAGGTGGTACTTGCCAACCTTTGCACGGTTGAACATGGAGTA
____________________________________________________________
consensus TGTTGTTCCACAAACCAAAAGGTGGTACTTGCCAACCTTTGCACGGTTGAACATGGAGTA
. : . : . : . : . : . :
JMFN010A02+ GAAGGTTGCAACCTCGTATACACGAATGGGAGCAACTTCAATAATCTTAGCCACCGCATT
JMSF015P13+ GAAGGTTGCAACCTCGTATACACGAATGGGAGCAACTTCAATAATCTTAGCCACCGCATT
JMFF042K24+ GAAGGTTGCAACCTCGTATACACGAATGGGAGCAACTTCAATAATCTTAGCCACCGCATT
JMSF032O14+ GAAGGTTGCAACCTCGTATACACGAATGGGAGCAACTTCAATAATCTTAGCCACCGCATT
JMFN012G14+ GAAGGTTGCAACCTCGTATACACGAATGGGAGCAACTTCAATAATCTTAGCCACCGCATT
____________________________________________________________
consensus GAAGGTTGCAACCTCGTATACACGAATGGGAGCAACTTCAATAATCTTAGCCACCGCATT
. : . : . : . : . : . :
JMFN010A02+ CATTGCTGAAACAGGAAGCCAACCCCCATGTTGCTGTTGTGCAAGATCAAGCAAAGGAAT
JMSF015P13+ CATTGCTGAAACAGGAAGCCAACCCCCATGTTGCTGTTGTGCAAGATCAAGCAAAGGAAT
JMFF042K24+ CATTGCTGAAACAGGAAGCCAACCCCCATGTTGCTGTTGTGCAAGATCAAGCAAAGGAAT
JMSF032O14+ CATTGCTGAAACAGGAAGCCAACCCCCATGTTGCTGTTGTGCAAGATCAAGCAAAGGAAT
JMFN012G14+ CATTGCTGAAACAGGAAGCCAACCCCCATGTTGCTGTTGTGCAAGATCAAGCAAAGGAAT
JMSF010I16+ AAGGAAT
____________________________________________________________
consensus CATTGCTGAAACAGGAAGCCAACCCCCATGTTGCTGTTGTGCAAGATCAAGCAAAGGAAT
. : . : . : . : . : . :
JMFN010A02+ GACTGCAGATTGCTTATAGTTGGATGGATAGTGAGATATTATTTCCTTAACCTTTCTCTT
JMSF015P13+ GACTGCAGATTGCTTATAGTTGGATGGATAGTGAGATATTATTTCCTTAACCTTTCTCTT
JMFN016D18+ TAACCTTTCTCTT
JMFF042K24+ GACTGCAGATTGCTTATAGTTGGATGGATAGTGAGATATTATTTCCTTAACCTTTCTCTT
JMSF032O14+ GACTGCAGATTGCTTATAGTTGGATGGATAGTGAGATATTATTTCCTTAACCTTTCTCTT
JMFN012G14+ GACTGCAGATTGCTTATAGTTGGATGGATAGTGAGATATTATTTCCTTAACCTTTCTCTT
JMSF010I16+ GACTGCAGATTGCTTATAGTNGGATGGATAGTGAGATATTATTTCCTTAACCTTTCTCTT
____________________________________________________________
consensus GACTGCAGATTGCTTATAGTTGGATGGATAGTGAGATATTATTTCCTTAACCTTTCTCTT
. : . : . : . : . : . :
JMFN010A02+ GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
JMSF015P13+ GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
JMFN016D18+ GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
JMFF042K24+ GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
JMSF032O14+ GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
JMFN012G14+ GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
JMSF010I16+ GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
____________________________________________________________
consensus GTTTGCCTCGGTAAACTCCCAAGGCATGTCAGAATTGTTCTCAGGGCTGTCAAGGTGATA
. : . : . : . : . : . :
JMFN010A02+ ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
JMSF015P13+ ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
JMFN016D18+ ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
JMFF042K24+ ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
JMSF032O14+ ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
JMFN012G14+ ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
JMSF010I16+ ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
____________________________________________________________
consensus ATTGAGTGCAGTTGAAAACGATCGCGAAGCCTGGGGTATTCCACGGAAGGCTTGGCGGAT
. : . : . : . : . : . :
JMFN010A02+ CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
JMSF015P13+ CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
JMFN016D18+ CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
JMFF042K24+ CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
JMSF032O14+ CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
JMFN012G14+ CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
JMSF010I16+ CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
____________________________________________________________
consensus CTCCGCCAAGCGTTGGCCGGCGAGGCGAGCTAGCATTTTGGTTCTCCGGCGATGGTACGA
. : . : . : . : . : . :
JMFN010A02+ GCTTCTTCAACGGTGAGAAATGGAACTCGTTGGGGCCAAGATAAAA
JMSF015P13+ GCTTCTTCAACGGT
JMFN016D18+ GCTTCTTCAACGGTGAGAAATGGAACTCGTT
JMFF042K24+ GCTTCTTCAACGGTGAGAAATGGAACTCGTTGGGGCCAAGATAAAATGAGAAGGTCTCTC
JMSF032O14+ GCTTCTTCAACGGTGAGAAATGGAACTCGTTGGGGCCAAGATAAAATGAGAAGGTCTCTC
JMFN012G14+ GCTTCTTCAACGGTGAGAAATGGAACTCATTGGGGCCAAGATAAAATGAGAAGGTCTCTC
JMSF010I16+ GCTTCTTCAACGGTGAGAAATGGAACTCGTTGGGGCCAAGATAAAATGAGAAGGTCTCTC
____________________________________________________________
consensus GCTTCTTCAACGGTGAGAAATGGAACTCGTTGGGGCCAAGATAAAATGAGAAGGTCTCTC
. : . : . : . : . : . :
JMFF042K24+ ACTA
JMSF032O14+ ACTA
JMFN012G14+ ACTATGGCTC
JMSF010I16+ ACTATGGCTCTTTGATTCGGGTCACCGGATCTAACTATTACGAATACGTATCCTATCTTC
____________________________________________________________
consensus ACTATGGCTCTTTGATTCGGGTCACCGGATCTAACTATTACGAATACGTATCCTATCTTC