Contig 007786:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010D04Sequence329007786 (2)ref|XP_009761854.1|1e-32PREDICTED: serine carboxypeptidase-like 18 [Nicotiana sylvestris]725014966ref|XP_004252000.2|7e-72PREDICTED: serine carboxypeptidase-like 7 [Solanum lycopersicum] ref|XP_01031400
JMSF010N12Sequence288007786 (2)gb|KFK32778.1|1e-29hypothetical protein AALP_AA6G287400 [Arabis alpina]644020315ref|XP_010061646.1|3e-36PREDICTED: serine carboxypeptidase-like 2 [Eucalyptus grandis] gb|KCW68630.1| hy

Alignment

This contig is upended


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JMSF010N12+                                                               TCCGAAAA
JMSF010D04+                                          CGGCCCAACATCGTAAACAATTCCGAAAA
                      ____________________________________________________________
consensus                                            CGGCCCAACATCGTAAACAATTCCGAAAA
 
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JMSF010N12+           AGGAAGAGCAACCTGGGCCGCCAGAGATCCAAAGGAAAAGAGGGTCTTCTTCTGGATTTG
JMSF010D04+           AGGAAGAGCAACCTGGGCCGCCAGAGATCCAAAGGAAAAGAGGGTCTTCTTCTGGATTTG
                      ____________________________________________________________
consensus             AGGAAGAGCAACCTGGGCCGCCAGAGATCCAAAGGAAAAGAGGGTCTTCTTCTGGATTTG
 
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JMSF010N12+           ATTCTGACTTGATAAAATAGTAGAAAAGTTGGACCTCTTCCGATTCACCCACGCCTATAT
JMSF010D04+           ATTCTGACTTGATAAAATAGTAGAAAAGTTGGACCTCTTCCGATTCACCCACGCCTATAT
                      ____________________________________________________________
consensus             ATTCTGACTTGATAAAATAGTAGAAAAGTTGGACCTCTTCCGATTCACCCACGCCTATAT
 
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JMSF010N12+           ATCCGGTTTCTAGGTGAAATGGGAGTGGTCCTTCAAATCCTGGAAGCGACTTAACTATGG
JMSF010D04+           ATCCGGTTTCTAGGTGAAATGGGAGTGGTCCTTCAAATCCTGGAAGCGACTTAACTATGG
                      ____________________________________________________________
consensus             ATCCGGTTTCTAGGTGAAATGGGAGTGGTCCTTCAAATCCTGGAAGCGACTTAACTATGG
 
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JMSF010N12+           AGCCGCATGCATCCAATTCTGGAGAAAGATGCAGAAGAAGAAGAAGAAGAAGAAAAAATG
JMSF010D04+           AGCCGCATGCATCCAATTCTGGAGAAAGATGCAGAAGAAGAAGAAGAAGAAGAAAAAATG
                      ____________________________________________________________
consensus             AGCCGCATGCATCCAATTCTGGAGAAAGATGCAGAAGAAGAAGAAGAAGAAGAAAAAATG
 
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JMSF010N12+           TATGGCAATTGCAGAGTGTATATTTCATTGTGGCTTTC                      
JMSF010D04+           TATGGCAATTGCAGAGTGTATATTTCATTGTGGCTTTCTACTTTTTTAATTATGAAGATC
                      ____________________________________________________________
consensus             TATGGCAATTGCAGAGTGTATATTTCATTGTGGCTTTCTACTTTTTTAATTATGAAGATC