Contig 007784:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS069G04Sequence619007784 (4)ref|XP_007133039.1|5e-12hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot
JMSF009K23Sequence361007784 (4)gb|KHN25192.1|8e-13hypothetical protein glysoja_044789 [Glycine soja]747021385gb|EMS56398.1|4e-1214-3-3-like protein GF14-D [Triticum urartu]
JMSF019J23Sequence442007784 (4)ref|XP_007133039.1|1e-14hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot795005521 (2)ref|XP_010646250.1|5e-20PREDICTED: transcriptional adapter ADA2b isoform X1 [Vitis vinifera] ref|XP_0106
JMSF025I21Sequence639007784 (4)ref|XP_007133039.1|3e-14hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot695021471ref|XP_009609286.1|5e-14PREDICTED: transcriptional adapter ADA2b isoform X1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF025I21+                                                    TAAAAAAAGAAAAGTAGGA
                      ____________________________________________________________
consensus                                                      TAAAAAAAGAAAAGTAGGA
 
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JMSF025I21+           AAATAATGTAAGGGTGAAATGAAATTGATAATGGAAATGAATAAAAGCTAACCCATCTCT
                      ____________________________________________________________
consensus             AAATAATGTAAGGGTGAAATGAAATTGATAATGGAAATGAATAAAAGCTAACCCATCTCT
 
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JMSF025I21+           GCCATTCCGGTCAGTGAAGCAAAGCTTTCAGGCTATGTCTCTGCTTCACATATAAGCCCT
                      ____________________________________________________________
consensus             GCCATTCCGGTCAGTGAAGCAAAGCTTTCAGGCTATGTCTCTGCTTCACATATAAGCCCT
 
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JMFS069G04+                AACAAAAATGATGCAATTTCCATATCAAAAAAAACAAGGCTTCATCTACATTCCT
JMSF025I21+           CCTTCAACAAAAATGATGCAATTTCCATATCAAAAAAAACAAGGCTTCATNTACATTCCT
                      ____________________________________________________________
consensus             CCTTCAACAAAAATGATGCAATTTCCATATCAAAAAAAACAAGGCTTCATCTACATTCCT
 
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JMFS069G04+           AAGTTTTTTGTGAACAACGATACAGCGTAAGTCTCATATCTGTCAAACACCAGGCATAAA
JMSF019J23+                                                                  ATAAA
JMSF025I21+           AAGTTTTTTGTGAACAACGATACAGCGTAAGTCTCATATCTGTCAAACACCAGGCATAAA
                      ____________________________________________________________
consensus             AAGTTTTTTGTGAACAACGATACAGCGTAAGTCTCATATCTGTCAAACACCAGGCATAAA
 
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JMFS069G04+           CATAAGTACATCAGAGTTCTCTGCTCCATTTTTTACCCATGAAAGGCTCGCACAATCCCA
JMSF019J23+           CATAAGTACATCAGAGTTCTCTGCTCCATTTTTTACCCATGAAAGGCTCGCACAATCCCA
JMSF025I21+           CATAAGTACATCAGAGTTCTCTGCTCCATTTTTTACCCATGAAAGGCTCGCACAATCCCA
                      ____________________________________________________________
consensus             CATAAGTACATCAGAGTTCTCTGCTCCATTTTTTACCCATGAAAGGCTCGCACAATCCCA
 
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JMFS069G04+           CATCGGAACCAAATGAGGAATATTTCCTCTTAATAAGTCCATAGGTAGAAGCAATGTTCG
JMSF019J23+           CATCGGAACCAAATGAGGAATATTTCCTCTTAATAAGTCCATAGGTAGAAGCAATGTTCG
JMSF025I21+           CATCGGAACCAAATGAGGAATATTTCCTCTTAATAAGTCCATAGGTAGAAGCAATGTTCG
JMSF009K23+                                ATTTCTTCTTAATAAGTCCGTAGGTAGAAGATTTGCTCG
                      ____________________________________________________________
consensus             CATCGGAACCAAATGAGGAATATTTCCTCTTAATAAGTCCATAGGTAGAAGCAATGTTCG
 
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JMFS069G04+           CTGGGCTTGGTAGCGCGAGCCTGTAACCTAAGTGGGAGCATTAGAATGGTGGAATAATTT
JMSF019J23+           CTGGGCTTGGTAGCGCGAGCCTGTAACCTAAGTGGGAGCATTAGAATGGTGGAATAATTT
JMSF025I21+           CTGGGCTTGGTAGCGCGAGCCTGTAACCTAAGTGGGAGCATTAGAATGGTGGAATAATTT
JMSF009K23+           CTGGGCTTGGTAGCGCGAGCCTGTAACCCAAGTGGGAGCATTAAGATGGTGGAATAAATG
                      ____________________________________________________________
consensus             CTGGGCTTGGTAGCGCGAGCCTGTAACCTAAGTGGGAGCATTAGAATGGTGGAATAATTT
 
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JMFS069G04+           GGCTTACCTTTGAAGGCTGGGCTCGGGGGTGCTATCTACTGGCTTGCCCGTTCCAAGTGG
JMSF019J23+           GGCTTACCTTTGAAGGCTGGGCTCGGGGGTGCTATCTACTGGCTTGCCCGTTCCAAGTGG
JMSF025I21+           GGCTTACCTTTGAAGGCTGGGCTCGGGGGTGCTATCTACTGGCTTGCCCGTTCCAAGTGG
JMSF009K23+           GGCTCGCC-TTGAAGGCTGGGCTCGGGGGTGCAATCTACTGGCTTGCCCGTTCCAAGTGA
                      ____________________________________________________________
consensus             GGCTTACCTTTGAAGGCTGGGCTCGGGGGTGCTATCTACTGGCTTGCCCGTTCCAAGTGG
 
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JMFS069G04+           TGAGTCCGGTTGTGGAGTCTCTGCGAAGGCGGAGGCTTCTCGTCTCTTAGACAGGAGGGC
JMSF019J23+           TGAGTCCGGTTGTGGAGTCTCTGCGAAGGCGGAGGCTTCTC                   
JMSF025I21+           TGAGTCCGGTTGTGGAGTCTCTGCGAAGGCGGAGGCTTCTCGTCTCTTAGACAGGAGGGC
JMSF009K23+           TGAGTCCGGCTGGGAAGCCTCTGCGAAGGCGGAGGCCTCTCGGCCCTTAGATCGGAGGGT
                      ____________________________________________________________
consensus             TGAGTCCGGTTGTGGAGTCTCTGCGAAGGCGGAGGCTTCTCGTCTCTTAGACAGGAGGGC
 
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JMFS069G04+           ACCGCGTCAGGCTGGTTTCACAGAGCAGCGAACACCTCCTCCTCTCTGCAGTGGAAG   
JMSF025I21+           ACCGCGTCAGGCTGGTTTCACAGAGCAGCGAACACCTCCTCCTCTCTGCAGTGGAAGGAT
JMSF009K23+           ACCGCGTCAGGCTGGCTTCACAGAGCAGCGAACACCTCTTCCTCTTTGCAGTGGAAGGAT
                      ____________________________________________________________
consensus             ACCGCGTCAGGCTGGTTTCACAGAGCAGCGAACACCTCCTCCTCTCTGCAGTGGAAGGAT
 
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JMSF025I21+           AACAGGCCAGAGCATCT                                           
JMSF009K23+           AACAGGCCGGAGCATCTTCAGTCCACCAAGCGCCTGATGGGTTGTCCAAAATAAACCACC
                      ____________________________________________________________
consensus             AACAGGCCGGAGCATCTTCAGTCCACCAAGCGCCTGATGGGTTGTCCAAAATAAACCACC