Contig 007783:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009K11Sequence366007783 (5)ref|XP_009783189.1|2e-05PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri737009752 (9)emb|CDO96854.1|6e-97unnamed protein product [Coffea canephora]
JMSF021K10Sequence643007783 (5)ref|XP_009783189.1|9e-65PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri690009752 (9)emb|CDO96854.1|4e-97unnamed protein product [Coffea canephora]
JMSF024O13Sequence650007783 (5)ref|XP_009783189.1|5e-52PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri690009752 (9)emb|CDO96854.1|4e-97unnamed protein product [Coffea canephora]
JMSF027M03Sequence656007783 (5)ref|XP_009783189.1|4e-63PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri717009752 (9)emb|CAN69940.1|6e-107hypothetical protein VITISV_006128 [Vitis vinifera]
JMSF028A20Sequence668007783 (5)ref|XP_009783189.1|3e-74PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri703009752 (9)emb|CDO96854.1|3e-94unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF028A20+                            CCCTGACTGTATTTGGCCCTGTCAGGGGTATCCCCTTCCTTGG
JMSF021K10+                                                                    TGG
JMSF027M03+                                                                    TGG
                      ____________________________________________________________
consensus                              CCCTGACTGTATTTGGCCCTGTCAGGGGTATCCCCTTCCTTGG
 
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JMSF028A20+           GGCCAACAATAACTGAAACAGCATTAATAACCTTTCTCACTCCTTTGAAATACTCAGGGA
JMSF021K10+           GGCCAACAATAACTGAAACAGCATTAATAACCTTTCTCACTCCTTTGAAATACTCAGGGA
JMSF027M03+           GGCCANCAATAACTGAAACAGCATTAATAACCTTTCTCACTCCTTTGAAATACTCAGGGA
JMSF024O13+                                                                TCAGGGA
                      ____________________________________________________________
consensus             GGCCAACAATAACTGAAACAGCATTAATAACCTTTCTCACTCCTTTGAAATACTCAGGGA
 
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JMSF028A20+           GCAGAGTGCTAGCCTTAGTGATATCACCTACAATCAGATCAACATCTTCGCCAAACATTT
JMSF021K10+           GCAGAGTGCTAGCCTTAGTGATATCACCTACAATCAGATCAACATCTTCGCCAAACATTT
JMSF027M03+           GCAGAGTGCTAGCCTTAGTGATATCACCTACAATCAGATCAACATCTTCGCCAAACATTT
JMSF024O13+           GCAGAGTGCTAGCCTTAGTGATATCACCTACAATCAGATCAACATCTTCGCCAAACATTT
                      ____________________________________________________________
consensus             GCAGAGTGCTAGCCTTAGTGATATCACCTACAATCAGATCAACATCTTCGCCAAACATTT
 
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JMSF028A20+           TTCTCGCCTTCTCTTCATTTCTGACCAGTGCTCGGACAGACAACCCTTTGCTGCGCAAGA
JMSF021K10+           TTCTCGCCTTCTCCTCATTTCTGACCAGTGCTCGGACAGACAACCCTTTGCTGCGCAAGA
JMSF027M03+           TTCTCGCCTTCTCTTCATTTCTGACCAGTGCTCGGACAGACAACCCTTTGCTGCGCAAGA
JMSF024O13+           TTCTCGCCTTCTCTTCATTTCTGACCAGTGCTCGGACAGACAACCCTTTGCTGCGCAAGA
                      ____________________________________________________________
consensus             TTCTCGCCTTCTCTTCATTTCTGACCAGTGCTCGGACAGACAACCCTTTGCTGCGCAAGA
 
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JMSF028A20+           TGTCTACTACTCTTCTTCCAACACCACCTGTGGCTCCAGCAACAAGGATGATCCCAGAAG
JMSF021K10+           TGTCTACTACTCTTCTTCCAACACCACCTGTGGCTCCAGCAACAAGGATGATCCCAGAAG
JMSF027M03+           TGTCTACTACTCTTCTTCCAACACCACCTGTGGCTCCAGCAACAAGGATGATCCCAGAAG
JMSF024O13+           TGTCTACTACTCTTCTTCCAACACCACCTGTGGCTCCAGCAACAAGGATGATCCCAGAAG
                      ____________________________________________________________
consensus             TGTCTACTACTCTTCTTCCAACACCACCTGTGGCTCCAGCAACAAGGATGATCCCAGAAG
 
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JMSF028A20+           AATCCATCGATTTTACCGGTTTACTAGGTGATGGACCAGATAGTTTCTCAATCAGAAATT
JMSF021K10+           AATCCATCGATTTTACCGGTTTACTAGGTGATGGACCAGATAGTTTCTCAATCAGAAATT
JMSF027M03+           AATCCATCGATTTTACCGGTTTACTAGGTGATGGACCAGATAGTTTCTCAATCAGAAATT
JMSF024O13+           AATCCATCGATTTTACCGGTTTACTAGGTGATGGACCAGATAGTTTCTCAATCAGAAATT
                      ____________________________________________________________
consensus             AATCCATCGATTTTACCGGTTTACTAGGTGATGGACCAGATAGTTTCTCAATCAGAAATT
 
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JMSF028A20+           CGAAGAACTTGGAAGGGGAGGGAGGTCCGTTGAAATAATACAATGTACTCAGGAATCTTC
JMSF021K10+           CGAAGAACTTGGAAGGGGAGGGAGGTCCGTTGAAATAATACAATGTACTCAGGAATCTTC
JMSF027M03+           CGAAGAACTTGGAAGGGGAGGGAGGTCCGTTGAAATAATACAATGTACTCAGGAATCTTC
JMSF024O13+           CGAAGAACTTGGAAGGGGAGGGAGGTCCGTTGAAATAATACAATGTACTCAGGAATCTTC
JMSF009K11+                                                                 ATCTTC
                      ____________________________________________________________
consensus             CGAAGAACTTGGAAGGGGAGGGAGGTCCGTTGAAATAATACAATGTACTCAGGAATCTTC
 
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JMSF028A20+           CAAAGTCCCAAGGTTGCTGTCCACTTTGTGCGAAAGGGCCCTTATATGTTGTAAAAGAGA
JMSF021K10+           CAAAGTCCCAAGGTTGCTGTCCACTTTGTGCGAAAGGGCCCTTATATGTTGTAAAAGAGA
JMSF027M03+           CAAAGTCCCAAGGTTGCTGTCCACTTTGTGCGAAAGGGCCCTTATATGTTGTAAAAGAGA
JMSF024O13+           CAAAGTCCCAAGGTTGCTGTCCACTTTGTGCGAAAGGGCCCTTATATGTTGTAAAAGAGA
JMSF009K11+           CAAAGTCCCAAGGTTGCTGTCCACTTTGTGCGAAAGGGCCCTTATATGTTGTAAAAGAGA
                      ____________________________________________________________
consensus             CAAAGTCCCAAGGTTGCTGTCCACTTTGTGCGAAAGGGCCCTTATATGTTGTAAAAGAGA
 
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JMSF028A20+           GATGCAGAGGACTTTGTTTTCTTAGAAAAGGTTGAGCTTTGATCTTAAGTTGGTGGCAGG
JMSF021K10+           GATGCAGAGGACTTTGTTTTCTTAGAAAAGGTTGAGCTTTGATCTTAAGTTGGTGGCAGG
JMSF027M03+           GATGCAGAGGACTTTGTTTTCTTAGAAAAGGTTGAGCTTTGATCTTAAGTTGGTGGCAGG
JMSF024O13+           GATGCAGAGGACTTTGTTTTCTTAGAAAAGGTTGAGCTTTGATCTTAAGTTGGTGGCAGG
JMSF009K11+           GATGCAGAGGACTTTGTTTTCTTAGAAAAGGTTGAGCTTTGATCTTAAGTTGGTGGCAGG
                      ____________________________________________________________
consensus             GATGCAGAGGACTTTGTTTTCTTAGAAAAGGTTGAGCTTTGATCTTAAGTTGGTGGCAGG
 
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JMSF028A20+           GTTTAGAAAGTGGAAATGGTGGAAGTAAAGATTTTTCAGAATATCCTACACCAACAGATG
JMSF021K10+           GTTTAGAAAGTGGAAATGGTGGAAGTAAAGATTTTTCAGAATATCCTACACCAACAGATG
JMSF027M03+           GTTTAGAAAGTGGAAATGGTGGAAGTAAAGATTTTTCAGAATATCCTACACCAACAGATG
JMSF024O13+           GTTTAGAAAGTGGAAATGGTGGAAGTAAAGATTTTTCAGAATATCCTACACCAACAGATG
JMSF009K11+           GTTTAGAAAGTGGAAATGGTGGAAGTAAAGATTTTTCAGAATATCCTACACCAACAGATG
                      ____________________________________________________________
consensus             GTTTAGAAAGTGGAAATGGTGGAAGTAAAGATTTTTCAGAATATCCTACACCAACAGATG
 
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JMSF028A20+           AAAAACCCCGAAAATTGAGGACGGCTGAGCAAGAAGGAAGTGTCTTGTTTACACCGCAAA
JMSF021K10+           AAAAACCCCGAAAATTGAGGACGGCTGAGCAAGAAGGAAGTGTCTTGTTTACACCGCAAA
JMSF027M03+           AAAAACCCCGAAAATTGAGGACGGCTGAGCAAGAAGGAAGTGTCTTGTTTACACCGCAAA
JMSF024O13+           AAAAACCCCGAAAATTGAGGACGGCTGAGCAAGAAGGAAGTGTCTTGTTTACACCGCAAA
JMSF009K11+           AAAAACCCCGAAAATTGAGGACGGCTGAGCAAGAAGGAAGTGTCTTGTTTACACCGCAAA
                      ____________________________________________________________
consensus             AAAAACCCCGAAAATTGAGGACGGCTGAGCAAGAAGGAAGTGTCTTGTTTACACCGCAAA
 
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JMSF028A20+           AACACTCCATCTTTTCGCACACTGC                                   
JMSF021K10+           AACACTCCATCTTTTCGCACACTGCACTGACGA                           
JMSF027M03+           AACACTCCATCTTTTCGCACACTGCACTGACGACTGATTAGTGAACCAATCC        
JMSF024O13+           AACACTCCATCTTTTCGCACACTGCACTGACGACTGATTAGTGAACCAATCCACTTGTCA
JMSF009K11+           AACACTCCATCTTTTCGCACACTGCACTGACGACTGATTAGTGAACCAATCCACTTGTCA
                      ____________________________________________________________
consensus             AACACTCCATCTTTTCGCACACTGCACTGACGACTGATTAGTGAACCAATCCACTTGTCA
 
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JMSF024O13+           TGACACTAGACCAGTAGATGGTAGAGGTGGAGCAACTGCTTC                  
JMSF009K11+           TGACACTAGACCAGTAGATGGTAGAGGTGGAGCAACTGCTTCTTCTTCTTCTTGTCTTTC
                      ____________________________________________________________
consensus             TGACACTAGACCAGTAGATGGTAGAGGTGGAGCAACTGCTTCTTCTTCTTCTTGTCTTTC