Contig 007777:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008K19Sequence297007777 (4)756005612 (2)ref|XP_009612799.1|318PREDICTED: uncharacterized protein LOC104106036 [Nicotiana tomentosiformis] ref|
JMSF012K15Sequence497007777 (4)ref|XP_009786598.1|5e-15PREDICTED: uncharacterized protein LOC104234688 isoform X3 [Nicotiana sylvestri726005612 (2)ref|XP_009612799.1|317PREDICTED: uncharacterized protein LOC104106036 [Nicotiana tomentosiformis] ref|
JMSF013G20Sequence250007777 (4)
JMSF032P12Sequence627007777 (4)ref|XP_009786598.1|1e-25PREDICTED: uncharacterized protein LOC104234688 isoform X3 [Nicotiana sylvestri706020439gb|EYU17984.1|4e-19hypothetical protein MIMGU_mgv1a004685mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF032P12+                                         TCCACTACATCCCAAACAAACTGCAATTTA
                      ____________________________________________________________
consensus                                           TCCACTACATCCCAAACAAACTGCAATTTA
 
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JMSF032P12+           GTGTCTTCTTCATTCTTCTTTGTACCGGAAGGGACGTCTCTTTAGGGAAGACATAATCAT
                      ____________________________________________________________
consensus             GTGTCTTCTTCATTCTTCTTTGTACCGGAAGGGACGTCTCTTTAGGGAAGACATAATCAT
 
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JMSF032P12+           ATGAGATTCTCTCTACTGTGTTTGCTAGAGACTTCTCTGAGGGAATCACACCGGCCATGT
JMSF012K15+                                                    GGAATCACACCGGCCATGT
                      ____________________________________________________________
consensus             ATGAGATTCTCTCTACTGTGTTTGCTAGAGACTTCTCTGAGGGAATCACACCGGCCATGT
 
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JMSF032P12+           AAGTAAGGAATATACTTGTCATTAGAAGCATTTGGTCCATAGTAGGGACCCAATCAGAAG
JMSF012K15+           AAGTAAGGAATATACTNGTCATTAGAAGCATTTGGTCCATAGTAGGGACCCAATCAGAAG
                      ____________________________________________________________
consensus             AAGTAAGGAATATACTTGTCATTAGAAGCATTTGGTCCATAGTAGGGACCCAATCAGAAG
 
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JMSF032P12+           TTGCAACATCACTAAGATCAAAGAGAGAACCAAAGCAAAAACACCTTTGACAACTTCCCT
JMSF012K15+           TTGCAACATCACTAAGATCAAAGAGAGAACCAAAGCAAAAACACCTTTGACAACTTCCCT
                      ____________________________________________________________
consensus             TTGCAACATCACTAAGATCAAAGAGAGAACCAAAGCAAAAACACCTTTGACAACTTCCCT
 
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JMSF032P12+           CATTCACATATCCCTTCATTTTTGTAGAATGAGGTGCAACAAGCCCTTTGGCACTCCATA
JMSF012K15+           CATTCACATATCCCTTCATTTTTGTAGAATGAGGTGCAACAAGCCCTTTGGCACTCCATA
                      ____________________________________________________________
consensus             CATTCACATATCCCTTCATTTTTGTAGAATGAGGTGCAACAAGCCCTTTGGCACTCCATA
 
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JMSF032P12+           GTGACAGCTGGGAAATGTTATGATTTTCAAGGTAAAGCTTCCTTCTTATTAGAATTTGTG
JMSF012K15+           GTGACAGCTGGGAAATGTTATGATTTTCAAGGT--AGCTTCCTTCTTATTAGAATTTGTG
JMSF013G20+                                                        TTATTAGAATTTGTG
JMSF008K19+                    GGGAAATGTTATGATTTTCAAGGTAAAGCTTCCTTCTTATTAGAATTTGTG
                      ____________________________________________________________
consensus             GTGACAGCTGGGAAATGTTATGATTTTCAAGGTAAAGCTTCCTTCTTATTAGAATTTGTG
 
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JMSF032P12+           AACTTCTAGGCACAAAAAGTTGCTGTCTTGAAAAATTCGCAACCATATGCATCTTAACAT
JMSF012K15+           AACTTCTAGGCACAAAAAGTTGCTGTCTTGAAAAATTCGCAACCATATGCATCTTAACAT
JMSF013G20+           AACTTCTAGGCACAAAAAGTTGCTGTCTTGAAAAATTCGCAACCATATGCATCTTAACAT
JMSF008K19+           AACTTCTAGGCACAAAAAGTTGCTGTCTTGAAAAATTCGCAACCATATGCATCTTAACAT
                      ____________________________________________________________
consensus             AACTTCTAGGCACAAAAAGTTGCTGTCTTGAAAAATTCGCAACCATATGCATCTTAACAT
 
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JMSF032P12+           TCGATGGAATGGTTGCAAAATGTGTAATTCTAAATCAAAATGTTCTGTTGCTTGCATACA
JMSF012K15+           TCGATGGAATGGTTGCAAAATGTGTAATTCTAAATCAAAATGTTCTGTTGCTTGCATACA
JMSF013G20+           TCGATGGAATGGTTGCAAAATGTGTAATTCTAAATCAAAATGTTCTGTTGCTTGCATACA
JMSF008K19+           TCGATGGAATGGTTGCAAAATGTGTAATTCTAAATCAAAATGTTCTGTTGCTTGCATACA
                      ____________________________________________________________
consensus             TCGATGGAATGGTTGCAAAATGTGTAATTCTAAATCAAAATGTTCTGTTGCTTGCATACA
 
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JMSF032P12+           TATCGCAAACTGTTCAGATACTCCAGCCTTCCAAAGTTCCAATGCAGTAACTGGTTTCTT
JMSF012K15+           TATTGCAAACTGTTCAGATACTCCAGCCTTCCAAAGTTCCAATGCAGTAACTGGTTTCTT
JMSF013G20+           TATTGCAAACTGTTCAGATACTCCAGCCTTCCAAAGTTCCAATGCAGTAACTGGTTTCTT
JMSF008K19+           TATTGCAAACTGTTCAGATACTCCAGCCTTCCAAAGTTCCAATGCAGTAACTGGTTTCTT
                      ____________________________________________________________
consensus             TATTGCAAACTGTTCAGATACTCCAGCCTTCCAAAGTTCCAATGCAGTAACTGGTTTCTT
 
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JMSF032P12+           GGGCACTACCTTCTTCTACTCCGCTATCACACTCTCTGGGGAAGAAACAAATTC      
JMSF012K15+           GGGCACTACCTTCTTCTACTCCGCTATCACACTCTCTGGGGAAGAAACAAATTC      
JMSF013G20+           GGGCACTACCTTCTTCTACTCCGCTATCACACTCTCTGGGGAAGAAACAAATTC      
JMSF008K19+           GGGCACTACCTTCTTCTACTCCGCTATCACACTCTCTGGGGAAGAAACAAATTCATAACC
                      ____________________________________________________________
consensus             GGGCACTACCTTCTTCTACTCCGCTATCACACTCTCTGGGGAAGAAACAAATTCATAACC