Contig 007776:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS073F03Sequence618007776 (3)ref|XP_009627041.1|2e-71PREDICTED: myosin heavy chain, cardiac muscle isoform isoform X2 [Nicotiana tom
JMFS149B12Sequence561007776 (3)ref|XP_009627041.1|1e-41PREDICTED: myosin heavy chain, cardiac muscle isoform isoform X2 [Nicotiana tom
JMSF008K11Sequence366007776 (3)emb|CDO97655.1|5e-16unnamed protein product [Coffea canephora]753014959ref|XP_009627035.1|6e-98PREDICTED: spindle assembly checkpoint component mad1 isoform X1 [Nicotiana tom

Alignment

This contig is upended


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JMFS073F03+                                                              CTGCTTTTG
                      ____________________________________________________________
consensus                                                                CTGCTTTTG
 
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JMFS073F03+           CACGAAGATTTGTCTCATGTTGGAACTTCACCTCAAGTTCATTGTATAACTGCAGTTGCT
                      ____________________________________________________________
consensus             CACGAAGATTTGTCTCATGTTGGAACTTCACCTCAAGTTCATTGTATAACTGCAGTTGCT
 
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JMFS073F03+           TTCTAAGTCGTTCCTCAGATGAATCAACCTCCTTCAAGAGCTGTTCCTGCAGTGATTCTT
JMFS149B12+                              TGAATCAACCTCCTTCAAGAGCTGTTCCTGCAGTGATTCTT
                      ____________________________________________________________
consensus             TTCTAAGTCGTTCCTCAGATGAATCAACCTCCTTCAAGAGCTGTTCCTGCAGTGATTCTT
 
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JMFS073F03+           CACGCCTTTTAGCAGCAGCCAGTTCTTGTTCAGCATAGAGGAATTGATCACGAAATTTCT
JMFS149B12+           CACGCCTNTTAGCAGCAGCCAGTTCTTGTTCAGCATAGAGGAATTGATCACGAAATTTCT
                      ____________________________________________________________
consensus             CACGCCTTTTAGCAGCAGCCAGTTCTTGTTCAGCATAGAGGAATTGATCACGAAATTTCT
 
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JMFS073F03+           TCCTTTCAGCATCAGCTTTGCGCAATTCATCATTTAAAGCTTCAAATTTGGACTGATAAT
JMFS149B12+           TCCTTTCAGCATCAGCTTTGCGCAATTCATCATTTAAAGCTTCAAATTTGGACTGATAAT
                      ____________________________________________________________
consensus             TCCTTTCAGCATCAGCTTTGCGCAATTCATCATTTAAAGCTTCAAATTTGGACTGATAAT
 
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JMFS073F03+           CCTGTGCTTGCTTTTCTGCACTGCTTAAGGCATCCAGAAACTCTGATTTTACCATTTGAC
JMFS149B12+           CCTGTGCTTGCTTTTCTGCACTGCTTAAGGCATCCAGAAACTCTGATTTTACCATTTGAC
JMSF008K11+                                                                    GAC
                      ____________________________________________________________
consensus             CCTGTGCTTGCTTTTCTGCACTGCTTAAGGCATCCAGAAACTCTGATTTTACCATTTGAC
 
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JMFS073F03+           GGCATTGATACGTGCAGAGCATCTGTTCGGAGGTGAAAGGATGATCGTGAGAAGATTCCG
JMFS149B12+           GGCATTGATACGTGCAGAGCATCTGTTCGGAGGTGAAAGGATGATCGTGAGAAGATTCCG
JMSF008K11+           GGCATTGATACGTGCAGAGCATCTGTTCGGAGGTGAAAGGATGATCGTGAGAAGATTCCG
                      ____________________________________________________________
consensus             GGCATTGATACGTGCAGAGCATCTGTTCGGAGGTGAAAGGATGATCGTGAGAAGATTCCG
 
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JMFS073F03+           GCGCCGAAGGATCATCCTCATAGATGACCAGCTGCTGACGGTTCGAAATGGGGCTGTTCT
JMFS149B12+           GCGCCGAAGGATCATCCTCATAGATGACCAGCTGCTGACGGTTCGAAATGGGGCTGTTCT
JMSF008K11+           GCGCCGAAGGATCATCCTCATAGATGACCAGCTGCTGACGGTTCGAAATGGGGCTGTTCT
                      ____________________________________________________________
consensus             GCGCCGAAGGATCATCCTCATAGATGACCAGCTGCTGACGGTTCGAAATGGGGCTGTTCT
 
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JMFS073F03+           CCTCCACCGGCTTCGCCTCCGACTCCGCCCTTCGCTTCCGCAATGGTGGCGTTCTGATAA
JMFS149B12+           CCTCCACCGGCTTCGCCTCCGACTCCGCCCTTCGCTTCCGCAATGGTGGCGTTCTGATAA
JMSF008K11+           CCTCCACCGGCTTCGCCTCCGACTCCGCCCTTCGCTTCCGCAATGGTGGCGTTCTGATAA
                      ____________________________________________________________
consensus             CCTCCACCGGCTTCGCCTCCGACTCCGCCCTTCGCTTCCGCAATGGTGGCGTTCTGATAA
 
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JMFS073F03+           TCATTCTCCTCCTCTTCGCGATTCACAGAAACCCTAAAGCTTAGCAATCGAACAACCAAT
JMFS149B12+           TCATTCTCCTCCTCTTCGCGATTCACAGAAACCCTAAAGCTTAGCAATCGAACAACCAAT
JMSF008K11+           TCATTCTCCTCCTCTTCGCGATTCACAGAAACCCTAAAGCTTAGCAATCGAACAACCAAT
                      ____________________________________________________________
consensus             TCATTCTCCTCCTCTTCGCGATTCACAGAAACCCTAAAGCTTAGCAATCGAACAACCAAT
 
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JMFS073F03+           TGATTTACCTCTATGCGTAGTATACTGCGTAGGCACAACTCGGAGCTCGGCTCGTGTGGG
JMFS149B12+           TGATTTACCTCTATGCGTAGTATACTGCGTAGGCACAACTCGGAGCTCGGCTCGTGTGGG
JMSF008K11+           TGATTTACCTCTATGCGTAGTATACTGCGTAGGCACAACTCGGAGCTCGGCTCGTGTGGG
                      ____________________________________________________________
consensus             TGATTTACCTCTATGCGTAGTATACTGCGTAGGCACAACTCGGAGCTCGGCTCGTGTGGG
 
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JMFS073F03+           AGAAAGGTA                                                   
JMFS149B12+           AGAAAGGTAGTCCACTTTGAAAATGGAAGCGCCAATATGG                    
JMSF008K11+           AGAAAGGTAGTCCACTTTGAAAATGGAAGCGCCAATATGGCTTTTCAGCTTTTTCTTCCC
                      ____________________________________________________________
consensus             AGAAAGGTAGTCCACTTTGAAAATGGAAGCGCCAATATGGCTTTTCAGCTTTTTCTTCCC