Contig 007773:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012L17Sequence512007773 (4)ref|XP_006351113.1|7e-05PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]672006814 (4)gb|EPS59790.1|3e-57splicing factor-like protein, partial [Genlisea aurea]
JMFF035C06Sequence511007773 (4)ref|XP_006351113.1|7e-05PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]641006814 (4)gb|EPS59790.1|7e-59splicing factor-like protein, partial [Genlisea aurea]
JMFN001A03Sequence353007773 (4)ref|XP_006351113.1|3e-05PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]
JMSF008G24Sequence252007773 (4)ref|XP_006351113.1|5e-06PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]652006814 (4)gb|EPS59790.1|4e-49splicing factor-like protein, partial [Genlisea aurea]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF035C06+ CTATCCCTATCCTTATCTCTATCCTTATCCCT
JMFF012L17+ CCTATCCCTATCCTTATCTCTATCCTTATCCCT
                      ____________________________________________________________
consensus CCTATCCCTATCCTTATCTCTATCCTTATCCCT
 
. : . : . : . : . : . :
JMFF035C06+ CTCCTTATCCTTTTCTTTCTTCTCCCTATCCCTTGAGCTCCTCTCTTTGTCTCTGTCGGA
JMFF012L17+ CTCCTTATCCTTTTCTTTCTTCTCCCTATCCCTTGAGCTCCTCTCTTTGTCTCTGTCGGA
                      ____________________________________________________________
consensus CTCCTTATCCTTTTCTTTCTTCTCCCTATCCCTTGAGCTCCTCTCTTTGTCTCTGTCGGA
 
. : . : . : . : . : . :
JMFF035C06+ CTCTCTATCCCGACTTCTATGCCGCGACGACCTCTCCTTATCTCTATCCCTTTCCCGGTC
JMFN001A03+ TTATCTCTATCCCTTTCCCGGTC
JMFF012L17+ CTCTCTATCCCGACTTCTATGCCGCGACGACCTCTCCTTATCTCTATCCCTTTCCCGGTC
                      ____________________________________________________________
consensus CTCTCTATCCCGACTTCTATGCCGCGACGACCTCTCCTTATCTCTATCCCTTTCCCGGTC
 
. : . : . : . : . : . :
JMFF035C06+ TCTATCCTTCTCCCTCCCGTTCTCTTCATCTCCACCCCGAGATCTTTTACTGCTCTTGCG
JMFN001A03+ TCTATCCTTCTCCCTCCCGTTCTCTTCATGTCCACCCCGAGATCTTTTACTGCTCTTGCG
JMFF012L17+ TCTATCCTTCTCCCTCCCGTTCTCTTCATCTCCACCCCGAGATCTTTTACTGCTCTTGCG
                      ____________________________________________________________
consensus TCTATCCTTCTCCCTCCCGTTCTCTTCATCTCCACCCCGAGATCTTTTACTGCTCTTGCG
 
. : . : . : . : . : . :
JMFF035C06+ ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
JMFN001A03+ ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
JMFF012L17+ ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
JMSF008G24+ CCTTCGGTAGCT
                      ____________________________________________________________
consensus ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
 
. : . : . : . : . : . :
JMFF035C06+ TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
JMFN001A03+ TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
JMFF012L17+ TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
JMSF008G24+ TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
                      ____________________________________________________________
consensus TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
 
. : . : . : . : . : . :
JMFF035C06+ AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
JMFN001A03+ AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
JMFF012L17+ AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
JMSF008G24+ AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
                      ____________________________________________________________
consensus AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
 
. : . : . : . : . : . :
JMFF035C06+ CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
JMFN001A03+ CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
JMFF012L17+ CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
JMSF008G24+ CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
                      ____________________________________________________________
consensus CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
 
. : . : . : . : . : . :
JMFF035C06+ GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGG
JMFN001A03+ GCTGGTGT
JMFF012L17+ GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGG
JMSF008G24+ GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGGGATACC
                      ____________________________________________________________
consensus GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGGGATACC