Contig 007773:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012L17Sequence512007773 (4)ref|XP_006351113.1|7e-05PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]672006814 (4)gb|EPS59790.1|3e-57splicing factor-like protein, partial [Genlisea aurea]
JMFF035C06Sequence511007773 (4)ref|XP_006351113.1|7e-05PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]641006814 (4)gb|EPS59790.1|7e-59splicing factor-like protein, partial [Genlisea aurea]
JMFN001A03Sequence353007773 (4)ref|XP_006351113.1|3e-05PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]
JMSF008G24Sequence252007773 (4)ref|XP_006351113.1|5e-06PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]652006814 (4)gb|EPS59790.1|4e-49splicing factor-like protein, partial [Genlisea aurea]

Alignment

This contig is upended


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JMFF035C06+                                       CTATCCCTATCCTTATCTCTATCCTTATCCCT
JMFF012L17+                                      CCTATCCCTATCCTTATCTCTATCCTTATCCCT
                      ____________________________________________________________
consensus                                        CCTATCCCTATCCTTATCTCTATCCTTATCCCT
 
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JMFF035C06+           CTCCTTATCCTTTTCTTTCTTCTCCCTATCCCTTGAGCTCCTCTCTTTGTCTCTGTCGGA
JMFF012L17+           CTCCTTATCCTTTTCTTTCTTCTCCCTATCCCTTGAGCTCCTCTCTTTGTCTCTGTCGGA
                      ____________________________________________________________
consensus             CTCCTTATCCTTTTCTTTCTTCTCCCTATCCCTTGAGCTCCTCTCTTTGTCTCTGTCGGA
 
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JMFF035C06+           CTCTCTATCCCGACTTCTATGCCGCGACGACCTCTCCTTATCTCTATCCCTTTCCCGGTC
JMFN001A03+                                                TTATCTCTATCCCTTTCCCGGTC
JMFF012L17+           CTCTCTATCCCGACTTCTATGCCGCGACGACCTCTCCTTATCTCTATCCCTTTCCCGGTC
                      ____________________________________________________________
consensus             CTCTCTATCCCGACTTCTATGCCGCGACGACCTCTCCTTATCTCTATCCCTTTCCCGGTC
 
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JMFF035C06+           TCTATCCTTCTCCCTCCCGTTCTCTTCATCTCCACCCCGAGATCTTTTACTGCTCTTGCG
JMFN001A03+           TCTATCCTTCTCCCTCCCGTTCTCTTCATGTCCACCCCGAGATCTTTTACTGCTCTTGCG
JMFF012L17+           TCTATCCTTCTCCCTCCCGTTCTCTTCATCTCCACCCCGAGATCTTTTACTGCTCTTGCG
                      ____________________________________________________________
consensus             TCTATCCTTCTCCCTCCCGTTCTCTTCATCTCCACCCCGAGATCTTTTACTGCTCTTGCG
 
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JMFF035C06+           ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
JMFN001A03+           ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
JMFF012L17+           ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
JMSF008G24+                                                           CCTTCGGTAGCT
                      ____________________________________________________________
consensus             ATCTCTGCCGTCCTCATCGGCTATATCGTCGCTCTCGTCCCTTTCCCTCCTTCGGTAGCT
 
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JMFF035C06+           TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
JMFN001A03+           TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
JMFF012L17+           TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
JMSF008G24+           TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
                      ____________________________________________________________
consensus             TTTCTCGCTCTTCTCCTTCTCGGATGGACTGTTTTCTCTGTCTTTGTCCTTGCTCTTCGA
 
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JMFF035C06+           AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
JMFN001A03+           AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
JMFF012L17+           AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
JMSF008G24+           AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
                      ____________________________________________________________
consensus             AGATGGACCGTTGGTCTCTTCCACAGCCTTCTCCAGATAATCATACTCGTCGAAGTCCAT
 
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JMFF035C06+           CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
JMFN001A03+           CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
JMFF012L17+           CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
JMSF008G24+           CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
                      ____________________________________________________________
consensus             CGCCATGCAGTTTTGCACGGAGGGCTGTTAGCGGAATTGCGAACCCTGGAGTACGTTAAT
 
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JMFF035C06+           GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGG      
JMFN001A03+           GCTGGTGT                                                    
JMFF012L17+           GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGG      
JMSF008G24+           GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGGGATACC
                      ____________________________________________________________
consensus             GCTGGTGTGAAACCCTAGAGAGCTCCCTTCGTTTAGGGTTTTCTGAGAATTGGGGATACC