Contig 007768:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007J22Sequence252007768 (2)593007768 (2)emb|CDP14939.1|2e-56unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007J22- ANATGNCNGCNG
                      ____________________________________________________________
consensus ANATGNCNGCNG
 
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rJMSF007J22- CATTCAANAANATTATNCTGGTTGANTTGCTCCTTAACTGCNNGNNAATTGNACTAACGG
                      ____________________________________________________________
consensus CATTCAANAANATTATNCTGGTTGANTTGCTCCTTAACTGCNNGNNAATTGNACTAACGG
 
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rJMSF007J22- GTACGTTTTTTACTTCTGGTTGGAGTTTTCGCTTTCGCCTTAACTTTCAGTTCCTCGGCA
                      ____________________________________________________________
consensus GTACGTTTTTTACTTCTGGTTGGAGTTTTCGCTTTCGCCTTAACTTTCAGTTCCTCGGCA
 
. : . : . : . : . : . :
rJMSF007J22- TTGATTGCTTCCTTGATGTGAGGGTCTTCAGGCAATGTACAGAGAAAAAATTTCTTGTTG
                      ____________________________________________________________
consensus TTGATTGCTTCCTTGATGTGAGGGTCTTCAGGCAATGTACAGAGAAAAAATTTCTTGTTG
 
. : . : . : . : . : . :
rJMSF007J22- GAGCCAATGTGGTTGCAGAATAGTTTCAGCATATGTCTACCCATCATCCATTTCAGCATT
                      ____________________________________________________________
consensus GAGCCAATGTGGTTGCAGAATAGTTTCAGCATATGTCTACCCATCATCCATTTCAGCATT
 
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rJMSF007J22- ATCTTCATGTGTGTTTTGCTGTTTAATCCATTGATACTAGCTTCCTTGGCGTGGTTCCAA
                      ____________________________________________________________
consensus ATCTTCATGTGTGTTTTGCTGTTTAATCCATTGATACTAGCTTCCTTGGCGTGGTTCCAA
 
. : . : . : . : . : . :
rJMSF007J22- GTGTTGGAAACACTGACAGGGCCGTGTTGCTTTATGACATCGTAAAGAGCTTCGGCAATG
                      ____________________________________________________________
consensus GTGTTGGAAACACTGACAGGGCCGTGTTGCTTTATGACATCGTAAAGAGCTTCGGCAATG
 
. : . : . : . : . : . :
rJMSF007J22- GAGGCAGCCTCTTGCTGCGGTACCTTCGGATTGATCTTCCTCAGATTGGGCGCCCGCTTT
JMSF007J22+ GGCGCCCGCTTT
                      ____________________________________________________________
consensus GAGGCAGCCTCTTGCTGCGGTACCTTCGGATTGATCTTCCTCAGATTGGGCGCCCGCTTT
 
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rJMSF007J22- CTTGAGTTCGACAAATATCTCACGAATGTCTTAATTACTCCTCCATTTCCTCCGCCCTGC
JMSF007J22+ CTTGAGTTCGACAAATATCTCACGAATGTCTTAATTACTCCTCCATTTCCTCCGCCCTGC
                      ____________________________________________________________
consensus CTTGAGTTCGACAAATATCTCACGAATGTCTTAATTACTCCTCCATTTCCTCCGCCCTGC
 
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rJMSF007J22- CACCACATTTCCTCCGTCTACTACTCTTCCGCCGCCGCAGCTGCCGCTGTGTTCTCTCTC
JMSF007J22+ CACCACATTTCCTCCGTCTACTACTCTTCCGCCGCCGCAGCTGCCGCTGTGTTCTCTCTC
                      ____________________________________________________________
consensus CACCACATTTCCTCCGTCTACTACTCTTCCGCCGCCGCAGCTGCCGCTGTGTTCTCTCTC
 
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rJMSF007J22- TCTCCAACGACCCTCCGACGCCCCCGGAAAACTATGTCTAG
JMSF007J22+ TCTCCAACGACCCTCCGACGCCCCCGGAAAACTATGTCTAGTGTGTTCTTCACCTCCGTC
                      ____________________________________________________________
consensus TCTCCAACGACCCTCCGACGCCCCCGGAAAACTATGTCTAGTGTGTTCTTCACCTCCGTC
 
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JMSF007J22+ CTCCCTTTCGGGACTCAACTGAGCTAATACAGATCAAATCCAAACTCTGCAGTATTGACC
                      ____________________________________________________________
consensus CTCCCTTTCGGGACTCAACTGAGCTAATACAGATCAAATCCAAACTCTGCAGTATTGACC