| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF032A20 | Sequence | 547 | 007765 (3) | ref|XP_009630079.1| | 2e-70 | PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Ni | 721 | 013664 (3) | ref|NP_001275280.1| | 4e-66 | branched-chain amino acid aminotransferase [Solanum tuberosum] gb|AAF07192.1|AF1 |
| JMFS070F10 | Sequence | 627 | 007765 (3) | ref|XP_009630079.1| | 6e-97 | PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Ni | |||||
| JMSF007D18 | Sequence | 257 | 007765 (3) | gb|ABW76425.1| | 5e-07 | branched-chain aminotransferase [Nicotiana benthamiana] | 327 | 013664 (3) | emb|CDP02646.1| | 6e-52 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFS070F10+ C
____________________________________________________________
consensus C
. : . : . : . : . : . :
JMFS070F10+ TTTCCCTGCTGNAGGAATCCATCTCTCATTTGCTAACACGGTAGCTTTCACTGCTTCCAG
____________________________________________________________
consensus TTTCCCTGCTGNAGGAATCCATCTCTCATTTGCTAACACGGTAGCTTTCACTGCTTCCAG
. : . : . : . : . : . :
JMFS070F10+ AAACTGTTCAACTGTTGGTGAAGGCATGCACATACGTTCTGCACCCATCTGCATGCGCAA
JMFF032A20+ CTGCATGCGCAA
____________________________________________________________
consensus AAACTGTTCAACTGTTGGTGAAGGCATGCACATACGTTCTGCACCCATCTGCATGCGCAA
. : . : . : . : . : . :
JMFS070F10+ AGCATTTTCCTCAGGCCGGAACAACAAAATGTGGCCATCTTGTTTTCTGTAGGCTTTTAA
JMFF032A20+ AGCATTTTCCTCAGGCCGGAACAACAAAATGTGGCCATCTTGTTTTCTGTAGGCTTTTAA
____________________________________________________________
consensus AGCATTTTCCTCAGGCCGGAACAACAAAATGTGGCCATCTTGTTTTCTGTAGGCTTTTAA
. : . : . : . : . : . :
JMFS070F10+ CCCCTCAAACAACCCCTGGCCATAATTTAATATCCCTGCTGATGGGCTCAATTCGATGTT
JMFF032A20+ CCCCTCAAACAACCCCTGGCCATAATTTAATATCCCTGCTGATGGGCTCAATTCGATGTT
____________________________________________________________
consensus CCCCTCAAACAACCCCTGGCCATAATTTAATATCCCTGCTGATGGGCTCAATTCGATGTT
. : . : . : . : . : . :
JMFS070F10+ CCCAAAACGCTGTAATTCACCTTTAGTAAAGGTTTTACCTTGAGAACATTTCATGATATA
JMFF032A20+ CCCAAAACGCTGTAATTCACCTTTAGTAAAGGTTTTACCTTGAGAACATTTCATGATATA
____________________________________________________________
consensus CCCAAAACGCTGTAATTCACCTTTAGTAAAGGTTTTACCTTGAGAACATTTCATGATATA
. : . : . : . : . : . :
JMFS070F10+ CATATAATCAGTAGGCATAAAGCCGAACCCGAGGTTGTCCCAGTCAAGGTCGACTACTTC
JMFF032A20+ CATATAATCAGTAGGCATAAAGCCGAACCCGAGGTTGTCCCAGTCAAGGTCGACTACTTC
____________________________________________________________
consensus CATATAATCAGTAGGCATAAAGCCGAACCCGAGGTTGTCCCAGTCAAGGTCGACTACTTC
. : . : . : . : . : . :
JMFS070F10+ GTTTGTTACATTGCTCATGGGAGAGACCACTCGCGGAGCATTACGATTATTATTGCTGCT
JMFF032A20+ GTTTGTTACATTGCTCATGGGAGAGACCACTCGCGGAGCATTACGATTATTATTGCTGCT
____________________________________________________________
consensus GTTTGTTACATTGCTCATGGGAGAGACCACTCGCGGAGCATTACGATTATTATTGCTGCT
. : . : . : . : . : . :
JMFS070F10+ GGTATTACCGTCGAAACCGAAATGTAGCTGATTTTGAAGCTTGAGAGGGAGAGGACAACA
JMFF032A20+ GGTATTACCGTCGAAACCGAAATGTAGCTGATTTTGAAGCTTGAGAGGGAGAGGACAACA
JMSF007D18+ AGAGGGAGAGGACAACA
____________________________________________________________
consensus GGTATTACCGTCGAAACCGAAATGTAGCTGATTTTGAAGCTTGAGAGGGAGAGGACAACA
. : . : . : . : . : . :
JMFS070F10+ TAGCTTTTTGTCGCTCAAGGAAACAGAAGGTAGCTGAACAGAACCTCTTGACGGTCGAGG
JMFF032A20+ TAGCTTTTTGTCGCTCAAGGAAACAGAAGGTAGCTGAACAGAACCTCTTGACGGTCGAGG
JMSF007D18+ TAGCTTTTTGTCGCTCAAGGAAACAGAAGGTAGCTGAACAGAACCTCTTGACGGTCGAGG
____________________________________________________________
consensus TAGCTTTTTGTCGCTCAAGGAAACAGAAGGTAGCTGAACAGAACCTCTTGACGGTCGAGG
. : . : . : . : . : . :
JMFS070F10+ AAGACGGTGGTGATGAGCAGGAGTAGGCTGAAGTCCTGCGAAAACGGCGGCGCTCTCCAT
JMFF032A20+ AAGACGGTGGTGATGAGCAGGAGTAGGCTGAAGTCCTGCGAAAACGGCGGCGCTCTCCAT
JMSF007D18+ AAGACGGTGGTGATGAGCAGGAGTAGGCTGAAGTCCTGCGAAAACGGCGGCGCTCTCCAT
____________________________________________________________
consensus AAGACGGTGGTGATGAGCAGGAGTAGGCTGAAGTCCTGCGAAAACGGCGGCGCTCTCCAT
. : . : . : . : . : . :
JMFS070F10+ TTCTCCTCTCTTCGTCCGCCGTCTGA
JMFF032A20+ TTCTCCTCTCTTCGTCCGCCGTCTGAGCTTTAGCTTCTTCTTTGACCTTTGGAGC
JMSF007D18+ TTCTCCTCTCTTCGTCCGCCGTCTGAGCTTTAGCTTCTTCTTTGACCTTTGGAGCAGAGC
____________________________________________________________
consensus TTCTCCTCTCTTCGTCCGCCGTCTGAGCTTTAGCTTCTTCTTTGACCTTTGGAGCAGAGC
. : . : . : . : . : . :
JMSF007D18+ CGCCGGAGAAACGTTTTATACACCTTACTGTTATAACTTACTGCTACGTCAGACCATGCA
____________________________________________________________
consensus CGCCGGAGAAACGTTTTATACACCTTACTGTTATAACTTACTGCTACGTCAGACCATGCA