| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001J24 | Sequence | 569 | 004621 (2) | ref|XP_009603008.1| | 1e-68 | PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond | 782 | 007758 (6) | ref|XP_006347139.1| | 6e-91 | PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond |
| JMFF040I24 | Sequence | 606 | 004621 (2) | ref|XP_009603008.1| | 1e-76 | PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond | 786 | 007758 (6) | ref|XP_004232796.1| | 4e-90 | PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond |
| JMSF006D05 | Sequence | 318 | 007758 (6) | ||||||||
| JMSF006E05 | Sequence | 423 | 007758 (6) | ref|XP_006347139.1| | 5e-16 | PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond | 406 | 002073 (11) | |||
| JMSF020H24 | Sequence | 628 | 007758 (6) | ref|XP_004232796.1| | 4e-55 | PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond | 722 | 002841 (2) | ref|XP_010693189.1| | 6e-07 | PREDICTED: uncharacterized protein LOC104906171 isoform X2 [Beta vulgaris subsp |
| JMSF024O19 | Sequence | 650 | 007758 (6) | ref|XP_006347139.1| | 5e-60 | PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond | 722 | 002841 (2) | emb|CBI21228.3| | 1e-07 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF001J24- CTCCCGAAG
____________________________________________________________
consensus CTCCCGAAG
. : . : . : . : . : . :
rJMFF001J24- GAATGAATCATTAATCTCAAGAAGAGTTACACTGCAAAAAAAGAATCGATTGTTTTGTGG
rJMFF040I24- TTAATCTCAAGAAGAGTTACACTGCAAAAAAAGAATCGATTGTTTTGTGG
____________________________________________________________
consensus GAATGAATCATTAATCTCAAGAAGAGTTACACTGCAAAAAAAGAATCGATTGTTTTGTGG
. : . : . : . : . : . :
rJMFF001J24- CATTATTATTGAATTCTCTTTTTCATGTGTTATGAAATCCTAAAGCTAGAAGAAAACCTC
rJMFF040I24- CATTATTATTGAATTCTCTTTTTCATGTGTTATGAAATCCTAAAGCTAGAAGAAAACCTC
____________________________________________________________
consensus CATTATTATTGAATTCTCTTTTTCATGTGTTATGAAATCCTAAAGCTAGAAGAAAACCTC
. : . : . : . : . : . :
rJMFF001J24- CAAACCAAAAATTGGGTGGAGATAAGAGTGCTGCAAAATTGAAGCTGATGAATACCTCCA
rJMFF040I24- CAAACCAAAAATTGGGTGGAGATAAGAGTGCTGCAAAATTGAAGCTGATGAATACCTCCA
____________________________________________________________
consensus CAAACCAAAAATTGGGTGGAGATAAGAGTGCTGCAAAATTGAAGCTGATGAATACCTCCA
. : . : . : . : . : . :
rJMFF001J24- ACCAAATGCTGACACAGTTGCATAAAGGAAAGAAGAGAAAAGAATTTCAGTACTCAATGA
rJMFF040I24- ACCAAATGCTGACACAGTTGCATAAAGGAAAGAAGAGAAAAGAATTTCAGTACTCAATGA
____________________________________________________________
consensus ACCAAATGCTGACACAGTTGCATAAAGGAAAGAAGAGAAAAGAATTTCAGTACTCAATGA
. : . : . : . : . : . :
rJMFF001J24- ATTTGGCACCAAAATGGCAAATTCAACCACAAGTCTGAGCAGAACTATAGGATCTTCATT
rJMFF040I24- ATTTGGCACCAAAATGGCAAATTCAACCACAAGTCTGAGCAGAACTATAGGATCTTCATT
____________________________________________________________
consensus ATTTGGCACCAAAATGGCAAATTCAACCACAAGTCTGAGCAGAACTATAGGATCTTCATT
. : . : . : . : . : . :
rJMFF001J24- AGATTTGGCTAGAGTCCCTCCCGAACAAGAATCGCCTTGTCCAGTCTGTCACCACCAACG
rJMFF040I24- AGATTTGGCTAGAGTCCCTCCCGAACAAGAATCGCCTTGTCCAGTCTGTCACCACCAACG
____________________________________________________________
consensus AGATTTGGCTAGAGTCCCTCCCGAACAAGAATCGCCTTGTCCAGTCTGTCACCACCAACG
. : . : . : . : . : . :
rJMFF001J24- CCCTTGTACGCCAACTGACTTGCTTGCTAGCATACACTGAATACCAGAGCCATTGTGTAC
rJMFF040I24- CCCTTGTACGCCAACTGACTTGCTTGCTAGCATACACTGAATACCAGAGCCATTGTGTAC
____________________________________________________________
consensus CCCTTGTACGCCAACTGACTTGCTTGCTAGCATACACTGAATACCAGAGCCATTGTGTAC
. : . : . : . : . : . :
rJMFF001J24- TGTGGCCAATTGAAACCCAATCTCCAGGAAGTTGTGCTGCTGTTTGCTCTCCTCCTAGAG
rJMFF040I24- TGTGGCCAATTGAAACCCAATCTCCAGGAAGTTGTGCTGCTGTTTGCTCTCCTCCTAGAG
____________________________________________________________
consensus TGTGGCCAATTGAAACCCAATCTCCAGGAAGTTGTGCTGCTGTTTGCTCTCCTCCTAGAG
. : . : . : . : . : . :
rJMFF001J24- GTGCAAATTGTCCAAGATGCTTGTACCTGAAGGGCCGGAAACGATGGCGTCCTTCTCCCC
rJMFF040I24- GTGCAAATTGTCCAAGATGCTTGTACCTGAAGGGCCGGAAACGATGGCGTCCTTCTCCCC
____________________________________________________________
consensus GTGCAAATTGTCCAAGATGCTTGTACCTGAAGGGCCGGAAACGATGGCGTCCTTCTCCCC
. : . : . : . : . : . :
rJMFF001J24- TAAAACGAATAGGACCCTCTGGATCCTTCTCGCACTTCTCCATACGGTTAAAGCAATCAG
rJMFF040I24- TAAAACGAATAGGACCCTCTGGATCCTTCTCGCACTTCTCCATACGGTTAAAGCAATCAG
JMSF020H24+ CCTTCTCGCACTTCTCCATACGGTTAAAGCAATCAG
JMSF024O19+ AAACGAATAGGACCCTCTGGATCCTTCTCGCACTTCTCCATACGGTTAAAGCAATCAG
____________________________________________________________
consensus TAAAACGAATAGGACCCTCTGGATCCTTCTCGCACTTCTCCATACGGTTAAAGCAATCAG
. : . : . : . : . : . :
rJMFF001J24- CAAGGTAGACACCTTGTTGAGATGCAACCTGAGCTGTAGCAGGAAGATTCTTCATCTGAG
rJMFF040I24- CAAGGTAGACACCTTGTTGAGATGCAACCTGAGCTGTAGCAGGAAGATTCTTCATCTGAG
JMSF020H24+ CAAGGTAGACACCTTGTTGAGATGCAACCTGAGCTGTAGCATGAAGATTCTTCATCTGAG
JMSF024O19+ CAAGGTAGACACCTTGTTGAGATGCAACCTGAGCTGTAGCATGAAGATTCTTCATCTGAG
____________________________________________________________
consensus CAAGGTAGACACCTTGTTGAGATGCAACCTGAGCTGTAGCATGAAGATTCTTCATCTGAG
. : . : . : . : . : . :
rJMFF001J24- AATCCGCTTTGGAGAGAGCTGATTTAAATTCTTCAATATCAACCTCAACAGATTCTTTAA
rJMFF040I24- AATCCGCTTTGGAGAGAGCTGATTTAAATTCTTCAATATCAACCTCAACAGATTCTTTAA
JMSF020H24+ AATCCATTTTGGAGAGAGCTGATTTAAATTCTTCAATATCAACCTCAACAGATTCTTTAA
JMSF024O19+ AATCCATTTTGGAGAGAGCTGATTTAAATTCTTCAATATCAACCTCAACAGATTCTTTAA
____________________________________________________________
consensus AATCCGTTTTGGAGAGAGCTGATTTAAATTCTTCAATATCAACCTCAACAGATTCTTTAA
. : . : . : . : . : . :
rJMFF001J24- CATCATTCCCTTTTGCTTCTTTCAATAAATCGACCAGGCCACTG
rJMFF040I24- CATCATTCCCTTTTGCTTCTTTCAATAAATCGACCAGGCCACTGGATATGGTTGTTTTTT
JMSF020H24+ CATCATCCCCTTTTGCTTCTTTCAATAAATCAACCAGGCCACT-GATGTGGTTCTTTTTT
JMSF024O19+ CATCATCCCCTTTTGCTTCTTTCAATAAATCAACCAGGCCACT-GATGTGGTTCTTTTTT
JMSF006E05+ TTT
____________________________________________________________
consensus CATCATTCCCTTTTGCTTCTTTCAATAAATCGACCAGGCCACTGGATGTGGTTCTTTTTT
. : . : . : . : . : . :
rJMFF040I24- AAGTAGAGCTCTACTT
JMSF020H24+ AAGTAGAGCTCTACTTGTGGGTATCTTTCACATATATCATTGAGGACTTCTTGAAATTCT
JMSF024O19+ AAGTAGAGCTCTACTTGTGGGTATCTTTCACATATATCATTGAGGACTTCTTGAAATTCT
JMSF006E05+ AAGTAGAGCTCTACTTGTGGGTATCTTTCACATATATCATTGAGGACTTCTTGAAATTCT
____________________________________________________________
consensus AAGTAGAGCTCTACTTGTGGGTATCTTTCACATATATCATTGAGGACTTCTTGAAATTCT
. : . : . : . : . : . :
JMSF020H24+ TTTACTGCTAGTGTTCCAGAATTGTCCTTGTCTGCCTTCTGAAATATAACTGCAATATCC
JMSF024O19+ TTTACTGCTAGTGTTCCAGAATTGTCCTTGTCTGCCTTCTGAAATATAACTGCAATATCC
JMSF006E05+ TTTACTGCTAGTGTTCCAGAATTGTCCTTGTCTGCCTTCTGAAATATAACTGCAATATCC
JMSF006D05+ AATATAACTGCAATATCC
____________________________________________________________
consensus TTTACTGCTAGTGTTCCAGAATTGTCCTTGTCTGCCTTCTGAAATATAACTGCAATATCC
. : . : . : . : . : . :
JMSF020H24+ TCCTGCGATGCGGTCGGCGTCCGAAGCTTGGAGACCGGAGGCGCGGTCGGCGTGCGTAGC
JMSF024O19+ TCCTGCGATGCGGTCGGCGTCCGAAGCTTGGAGACCGGAGGCGCGGTCGGCGTGCGTAGC
JMSF006E05+ TCCTGCGATGCGGTCGGCGTCCGAAGCTTGGAGACCGGAGGCGCGGTCGGCGTGCGTAGC
JMSF006D05+ TCCTGCGATGCGGTCGGCGTCCGAAGCTTGGAGACCGGAGGCGCGGTCGGCGTGCGTAGC
____________________________________________________________
consensus TCCTGCGATGCGGTCGGCGTCCGAAGCTTGGAGACCGGAGGCGCGGTCGGCGTGCGTAGC
. : . : . : . : . : . :
JMSF020H24+ TTGGAGCGGCAGCGGCGGCGAGCTTGGGCGGCAACGGAGGGGAAGCAATCTGAAGCAGCG
JMSF024O19+ TTGGAGCGGCAGCGGCGGCGAGCTTGGGCGGCAACGGAGGGGAAGCAATCTGAAGCAGCG
JMSF006E05+ TTGGAGCGGCAGCGGCGGCGAGCTTGGGCGGCAACGGAGGGGAAGCAATCTGAAGCAGCG
JMSF006D05+ TTGGAGCGGCAGCGGCGGCGAGCTTGGGCGGCAACGGAGGGGAAGCAATCTGAAGCAGCG
____________________________________________________________
consensus TTGGAGCGGCAGCGGCGGCGAGCTTGGGCGGCAACGGAGGGGAAGCAATCTGAAGCAGCG
. : . : . : . : . : . :
JMSF020H24+ ACAGTGCGTGCGATCGGAGCTATGGACGATGAAGAAGCTTGAGCGGCAGCGTTCGGCGAT
JMSF024O19+ ACAGTGCGTGCGATCGGAGCTATGGACGATGAAGAAGCTTGAGCGGCAGCGTTCGGCGAT
JMSF006E05+ ACAGTGCGTGCGATCGGAGCTATGGACGATGAAGAAGCTTGAGCGGCAGCGTTCGGCGAT
JMSF006D05+ ACAGTGCGTGCGATCGGAGCTATGGACGATGAAGAAGCTTGAGCGGCAGCGTTCGGCGAT
____________________________________________________________
consensus ACAGTGCGTGCGATCGGAGCTATGGACGATGAAGAAGCTTGAGCGGCAGCGTTCGGCGAT
. : . : . : . : . : . :
JMSF020H24+ GGACTGGACTGGCCGGACGACGGCGATGGACGGCGTGCGGTGGAGGATGTCTTTGAAATC
JMSF024O19+ GGACTGGACTGGCCGGACGACGGCGATGGACGGCGTGCGGTGGAGGATGTCTTTGAAATC
JMSF006E05+ GGACTGGACTGGCCGGACGACGGCGATGGACGGCGTGCGGTGGAGGATGTCTTTGAAATC
JMSF006D05+ GGACTGGANTGGCCGGACGACGGCGATGGACGGCGTGCGGTGGAGGATGTCTTTGAAATC
____________________________________________________________
consensus GGACTGGACTGGCCGGACGACGGCGATGGACGGCGTGCGGTGGAGGATGTCTTTGAAATC
. : . : . : . : . : . :
JMSF020H24+ AGTTTTTTTCTCACTAATAGGAAAAACCTGGTAACACATCAAGCTACGGTAC
JMSF024O19+ AGTTTTTTTCTCACTAATAGGAAAAACCTGGTAACACATCAAGCTACGGTAC
JMSF006E05+ AGTTTTTTTCTCACTAATAGGAAAAACCTGGTAACACATCAAGCTACGGTAC
JMSF006D05+ AGTTTTTTTCTCACTAATAGGAAAAACCTGGTAACACATCAAGNTACGGTACAATCAGCC
____________________________________________________________
consensus AGTTTTTTTCTCACTAATAGGAAAAACCTGGTAACACATCAAGCTACGGTACAATCAGCC