Contig 007755:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN002E07Sequence631007755 (5)
JMFN010G14Sequence625007755 (5)
JMFN037E22Sequence598007755 (5)
JMSF005P22Sequence301007755 (5)405007755 (5)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005P22-                      ACACCGGTGAGACGGATATCAAAAACGAATTAAAGCATCTAATCTCCT
                      ____________________________________________________________
consensus                         ACACCGGTGAGACGGATATCAAAAACGAATTAAAGCATCTAATCTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005P22-          CAATCGCTGTGATCAACACCGTCAAAATCAATGAATATAAAAAATTCAATGAAATATAGA
JMFN010G14+              TCGCTGTGATCAACACCGTCAAAATCAATGAATATAAAAAATTCAATGAAATATAGA
JMFN037E22+                                     ATCAATGAATATAAAAAATTCAATGAAATATAGA
JMFN002E07+                                     ATCAATGAATATAAAAAATTCAATGAAATATAGA
                      ____________________________________________________________
consensus             CAATCGCTGTGATCAACACCGTCAAAATCAATGAATATAAAAAATTCAATGAAATATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005P22-          TATATAGAGCCCTAAATCATCAACTCCGGTGTATGTGAAAAGAATCTCAGGCACATCAGA
JMFN010G14+           TATATAGAGCCCTAAATCATCAACTCCGGTGTATGTGAAAAGAATCTCAGGCACATCAGA
JMFN037E22+           TATATAGAGCCCTAAATCATCAACTCCGGTGTATGTGAAAAGAATCTCAGGCACATCAGA
JMFN002E07+           TATATAGAGCCCTAAATCATCAACTCCGGTGTATGTGAAAAGAATCTCAGGCACATCAGA
                      ____________________________________________________________
consensus             TATATAGAGCCCTAAATCATCAACTCCGGTGTATGTGAAAAGAATCTCAGGCACATCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005P22-          GAATTTAAAACAGCAAAGCGGCAGCGACGAACGCCAAACCAGCAGATCCGACGAGAGCGA
JMFN010G14+           GAATTTAAAACAGCAAAGCGGCAGCGACGAACGCCAAACCAGCAGATCCGACGAGAGCGA
JMFN037E22+           GAATTTAAAACAGCAAAGCGGCAGCGACGAACGCCAAACCAGCAGATCCGACGAGAGCGA
JMFN002E07+           GAATTTAAAACAGCAAAGCGGCAGCGACGAACGCCAAACCAGCAGATCCGACGAGAGCGA
                      ____________________________________________________________
consensus             GAATTTAAAACAGCAAAGCGGCAGCGACGAACGCCAAACCAGCAGATCCGACGAGAGCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005P22-          CTCTGTTCAAAGCGGCGGCGTTGGGAGGGGAGGAAGGAGCATCGCTTCCGGGAGCCTGTG
JMFN010G14+           CTCTGTTCAAAGCGGCGGCGTTGGGAGGGGAGGAAGGAGCATCGCTTCCGGGAGCCTGTG
JMFN037E22+           CTCTGTTCAAAGCGGCGGCGTTGGGAGGGGAGGAAGGAGCATCGCTTCCGGGAGCCTGTG
JMFN002E07+           CTCTGTTCAAAGCGGCGGCGTTGGGAGGGGAGGAAGGAGCATCGCTTCCGGGAGCCTGTG
                      ____________________________________________________________
consensus             CTCTGTTCAAAGCGGCGGCGTTGGGAGGGGAGGAAGGAGCATCGCTTCCGGGAGCCTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005P22-          AGATGGATGGAGGATTAGCAACGGTGGAGGCGGGGGAGACGGCAGGAGTGCCGGTGGGAG
JMFN010G14+           AGATGGATGGAGGATTAGCAACGGTGGAGGCGGGGGAGACGGCAGGAGTGCCGGTGGGAG
JMFN037E22+           AGATGGATGGAGGATTAGCAACGGTGGAGGCGGGGGAGACGGCAGGAGTGCCGGTGGGAG
JMFN002E07+           AGATGGATGGAGGATTAGCAACGGTGGAGGCGGGGGAGACGGCAGGAGTGCCGGTGGGAG
                      ____________________________________________________________
consensus             AGATGGATGGAGGATTAGCAACGGTGGAGGCGGGGGAGACGGCAGGAGTGCCGGTGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005P22-          GAGCCGGTGGAGAANAGAGTGGTGACTCANAAGGAGCGGCGGCAGATGGAGTCTGAG   
JMFN010G14+           GAGCCGGTGGAGAAGAGAGTGGTGACTCAGAAGGAGCGGCGGCAGATGGAGTCTGAGCCG
JMFN037E22+           GAGCCGGTGGAGAAGAGAGTGGTGACTCAGAAGGAGCGGCGGCAGATGGAGTCTGAGCCG
JMFN002E07+           GAGCCGGTGGAGAAGAGAGTGGTGACTCAGAAGGAGCGGCGGCAGATGGAGTCTGAGCCG
JMSF005P22+                                                                      G
                      ____________________________________________________________
consensus             GAGCCGGTGGAGAAGAGAGTGGTGACTCAGAAGGAGCGGCGGCAGATGGAGTCTGAGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010G14+           GAGAGGACGCTGGAGAAGAACGCGGTGCCGCCGGCACTGCCTGCGGCGGAGACGCCACCG
JMFN037E22+           GAGAGGACGCTGGAGAAGAACGCGGTGCCGCCGGCACTGCCTGCGGCGGAGACGCCACCG
JMFN002E07+           GAGAGGACGCTGGAGAAGAACGCGGTGCCGCCGGCACTGCCTGCGGCGGAGACGCCACCG
JMSF005P22+           GAGAGGACGCTGGAGAAGAACGCGGTGCCGCCGGCACTGCCTGCGGCGGAGACGCCACCG
                      ____________________________________________________________
consensus             GAGAGGACGCTGGAGAAGAACGCGGTGCCGCCGGCACTGCCTGCGGCGGAGACGCCACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010G14+           GAGATGGAGATCTCTTCGGTGAAGCAGCTGGTGCAGCTCCTGGAGCCTGAGCAAAGGCAG
JMFN037E22+           GAGATGGAGATCTCTTCGGTGAAGCAGCTGGTGCAGCTCCTGGAGCCTGAGCAAAGGCAG
JMFN002E07+           GAGATGGAGATCTCTTCGGTGAAGCAGCTGGTGCAGCTCCTGGAGCCTGAGCAAAGGCAG
JMSF005P22+           GAGATGGAGATCTCTTCGGTGAAGCAGCTGGTGCAGCTCCTGGAGCCTGAGCAAAGGCAG
                      ____________________________________________________________
consensus             GAGATGGAGATCTCTTCGGTGAAGCAGCTGGTGCAGCTCCTGGAGCCTGAGCAAAGGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010G14+           ATCCAGCCATCAAGGCCAACATCATAACAACAACAACTCTCAAGTAAGCCATTTTTCTAC
JMFN037E22+           ATCCAGCCATCAAGGCCAACATCATAACAACAACAACTCTCAAGTAAGCCATTTTTCTAC
JMFN002E07+           ATCCAGCCATCAAGGCCAACATCATAACAACAACAACTCTCAAGTAAGCCATTTTTCTAC
JMSF005P22+           ATCCAGCCATCAAGGCCAACATCATAACAACAACAACTCTCAAGTAAGCCATTTTTCTAC
                      ____________________________________________________________
consensus             ATCCAGCCATCAAGGCCAACATCATAACAACAACAACTCTCAAGTAAGCCATTTTTCTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010G14+           TCAAACTATAATTCAAGTTCAACAAACTTCGCTTCTGTTTGCAGAGAAATCGAAATCGTA
JMFN037E22+           TCAAACTATAATTCAAGTTCAACAAACTTCGCTTCTGTTTGCAGAGAAATCGAAATCGTA
JMFN002E07+           TCAAACTATAATTCAAGTTCAACAAACTTCGCTTCTGTTTGCAGAGAAATCGAAATCGTA
JMSF005P22+           TCAAACTATAATTCAAGTTCAACAAACTTCGCTTCTGTTTGCAGAGAAATCGAAATCGTA
                      ____________________________________________________________
consensus             TCAAACTATAATTCAAGTTCAACAAACTTCGCTTCTGTTTGCAGAGAAATCGAAATCGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010G14+           TGTATAGGCAGAGCCGCAGAGAGA                                    
JMFN037E22+           TGTATAGGCAGAGCCGCAGAGAGA                                    
JMFN002E07+           TGTATAGGCAGAGCCGCAGAGAGAGAAATATCTGTGAAT                     
JMSF005P22+           TGTATAGGCAGAGCCGCAGAGAGAGAAATATCTGTGAATGAAGAGATGAGTGAATGGGTC
                      ____________________________________________________________
consensus             TGTATAGGCAGAGCCGCAGAGAGAGAAATATCTGTGAATGAAGAGATGAGTGAATGGGTC