Contig 007750:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019F04Sequence610007750 (3)ref|XP_009762490.1|3e-52PREDICTED: ribonuclease UK114 [Nicotiana sylvestris] gb|AIE54286.1| constitutive688020180ref|XP_003532126.1|2e-73PREDICTED: ribonuclease UK114-like [Glycine max]
JMFF037O19Sequence565007750 (3)ref|XP_004152932.1|5e-62PREDICTED: ribonuclease UK114-like [Cucumis sativus] gb|KGN56123.1| hypothetical120014897
JMSF005G23Sequence287007750 (3)

Alignment

This contig is upended


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JMFF019F04+                                                           TATGCATTCAAC
                      ____________________________________________________________
consensus                                                             TATGCATTCAAC
 
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JMFF019F04+           TTCTATCTTTGCATCCTTGGGTAATGCTGCCACCTGATAAGTTGCACGGGCTGGATATGG
JMFF037O19+                                             TGATAAGTTGCACGGGCTGGATATGG
                      ____________________________________________________________
consensus             TTCTATCTTTGCATCCTTGGGTAATGCTGCCACCTGATAAGTTGCACGGGCTGGATATGG
 
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JMFF019F04+           TGATGGGAAATATTTAGCATATATCGCATTCACGTTGTTGAAGTCATTCATATCAGCTAA
JMFF037O19+           TGATGGGAAATATTTAGCATATATCGCATTCACGTTGTNGAAGTCATTCATATCAGCTAA
                      ____________________________________________________________
consensus             TGATGGGAAATATTTAGCATATATCGCATTCACGTTGTTGAAGTCATTCATATCAGCTAA
 
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JMFF019F04+           CAAGATTGTAGTCTTAACAACACTGCTATAGTCCAGCACCACCTGCTTTGAGTATCTCCC
JMFF037O19+           CAAGATTGTAGTCTTAACAACACTGCTATAGT-CAGCACCACCTGCTTTGAGTATCTCCC
                      ____________________________________________________________
consensus             CAAGATTGTAGTCTTAACAACACTGCTATAGTCCAGCACCACCTGCTTTGAGTATCTCCC
 
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JMFF019F04+           CTATGTTCCTTAGAACCTGCTCTGTTTGGTTCCCCACATCATCCGACACAAACTCCTCAG
JMFF037O19+           CTATGTTCCTTAGAACCTGCTCTGTTTGGTTCCCCACATCATCCGACACAAACTCCTCAG
                      ____________________________________________________________
consensus             CTATGTTCCTTAGAACCTGCTCTGTTTGGTTCCCCACATCATCCGACACAAACTCCTCAG
 
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JMFF019F04+           TCTCTGGATCAAGACCAAGCATTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCTT
JMFF037O19+           TCTCTGGATCAAGACCAAGCATTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCTT
                      ____________________________________________________________
consensus             TCTCTGGATCAAGACCAAGCATTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCTT
 
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JMFF019F04+           GAGAGTAAGGTCCCAGTGCAGCTGGAGCCTTATCAGTTTCAACAGCCTCCTTTACACTTG
JMFF037O19+           GAGAGTAAGGTCCCAGTGCAGCTGGAGCCTTATCAGTTTCAACAGCCTCCTTTACACTTG
JMSF005G23+                                                                 CACTTG
                      ____________________________________________________________
consensus             GAGAGTAAGGTCCCAGTGCAGCTGGAGCCTTATCAGTTTCAACAGCCTCCTTTACACTTG
 
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JMFF019F04+           TATCAGTAGAAGCGCTAAAGGAAGCGAAAGGCTTTGACGACCGGCGAGAGGTCGCAGCCA
JMFF037O19+           TATCAGTAGAAGCGCTAAAGGAAGCGAAAGGCTTTGACGACCGGCGAGAGGTCGCAGCCA
JMSF005G23+           TATCAGTAGAAGCGCTAAAGGAAGCGAAAGGCTTTGACGACCGGCGAGAGGTCGCAGCCA
                      ____________________________________________________________
consensus             TATCAGTAGAAGCGCTAAAGGAAGCGAAAGGCTTTGACGACCGGCGAGAGGTCGCAGCCA
 
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JMFF019F04+           CCAGTGATACACGGCCTGCGCGGGC-AAGGCTGAGGGAGAAGGGTTGCGAAATGCGCAGA
JMFF037O19+           CCAGTGATACACGGCCTGCGCGGGC-AAGGCTGAGGGAGAAGGGTTGCGAAATGCGCAGA
JMSF005G23+           CCAGTGATACACGGCCTGCGCGGGCGAAGGCTGAGGGAGAAGGGTTGCGAAATGCGCAGA
                      ____________________________________________________________
consensus             CCAGTGATACACGGCCTGCGCGGGC-AAGGCTGAGGGAGAAGGGTTGCGAAATGCGCAGA
 
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JMFF019F04+           CGTCGGAGGGGCGCAAATGCAAAGCCTTCGCTGCGACGAACAAGGAGGCCATTGATTTTT
JMFF037O19+           CGTCGGAGGGGCGCAAATGCAAAGCCTTCGCTGCGACGAACAAGGAGGCCATTGATTTTT
JMSF005G23+           CGTCGGAGGGGCGCAAATGCAAAGCCTTCGCTGCGACGAACAAGGAGGCCATTGATTTTT
                      ____________________________________________________________
consensus             CGTCGGAGGGGCGCAAATGCAAAGCCTTCGCTGCGACGAACAAGGAGGCCATTGATTTTT
 
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JMFF019F04+           CCGCTTCACTCACCAAATCCTTCAACT                                 
JMFF037O19+           CCGCTTCACTCACCAAATCCTTCAACT                                 
JMSF005G23+           CCGCTTCACTCACCAAATCCTTCAACTTCGACTGCGCTCTGCTCTGCTCTGCTGCTGACC
                      ____________________________________________________________
consensus             CCGCTTCACTCACCAAATCCTTCAACTTCGACTGCGCTCTGCTCTGCTCTGCTGCTGACC