Contig 007747:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS111C11Sequence627007747 (2)ref|XP_009767125.1|9e-93PREDICTED: mitogen-activated protein kinase kinase 3 isoform X3 [Nicotiana sylv
JMSF004N10Sequence352007747 (2)emb|CDP18447.1|3e-18unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS111C11+                                                                      G
                      ____________________________________________________________
consensus                                                                        G
 
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JMFS111C11+           TATAAAATGCTCCATAGAATTCAACAAGACCTTGATAACAAGGTGCCTCACACAAGGTTC
                      ____________________________________________________________
consensus             TATAAAATGCTCCATAGAATTCAACAAGACCTTGATAACAAGGTGCCTCACACAAGGTTC
 
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JMFS111C11+           TTATTTCAGTAAGAAGCTGTTGCCTTTTCTCCTTCTCAAAGATATTAATCTTCTTCAAGG
                      ____________________________________________________________
consensus             TTATTTCAGTAAGAAGCTGTTGCCTTTTCTCCTTCTCAAAGATATTAATCTTCTTCAAGG
 
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JMFS111C11+           CAATTATTCTGTGAGTGGGCATATGAATAGCTCTCTGTACAACACTGCTTGCACCACTTC
                      ____________________________________________________________
consensus             CAATTATTCTGTGAGTGGGCATATGAATAGCTCTCTGTACAACACTGCTTGCACCACTTC
 
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JMFS111C11+           CTATGGCTCCAAAAACCCTCATCTCATGTGAAGCACACCTATATGTCTTTTCACCATGAT
                      ____________________________________________________________
consensus             CTATGGCTCCAAAAACCCTCATCTCATGTGAAGCACACCTATATGTCTTTTCACCATGAT
 
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JMFS111C11+           CAGCATCATCAACTGGCCATGAAGTGCACTTTTGCAATCCAAGCTCATTAAAGTTGTACA
                      ____________________________________________________________
consensus             CAGCATCATCAACTGGCCATGAAGTGCACTTTTGCAATCCAAGCTCATTAAAGTTGTACA
 
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JMFS111C11+           CACCGTATGATTGACTCAACAAATTCAAGGTACCCCCATCAGAAAGCATGTATGAGTCGG
JMSF004N10+                   GATTGACTCAACAAATTCAAGGTACCCCCATCAGAAAGCATGTATGAGTCGG
                      ____________________________________________________________
consensus             CACCGTATGATTGACTCAACAAATTCAAGGTACCCCCATCAGAAAGCATGTATGAGTCGG
 
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JMFS111C11+           AAGGATCCAATGTTGATCCAGATGAGAATCCTTTTTCAGCATCAAAAAGTGGTACAAGCT
JMSF004N10+           AAGGATCCAATGTTGATCCAGATGAGAATCCTTTTTCAGCATCAAAAAGTGGTACAAGCT
                      ____________________________________________________________
consensus             AAGGATCCAATGTTGATCCAGATGAGAATCCTTTTTCAGCATCAAAAAGTGGTACAAGCT
 
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JMFS111C11+           TCTTTTTTAATTCTTCCAATCCAGCCATGGCCTATTGAACTTTAACTCAAAAAGTATTCT
JMSF004N10+           TCTTTTTTAATTCTTCCAATCCAGCCATGGCCTATTGAACTTTAACTCAAAAAGTATTCT
                      ____________________________________________________________
consensus             TCTTTTTTAATTCTTCCAATCCAGCCATGGCCTATTGAACTTTAACTCAAAAAGTATTCT
 
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JMFS111C11+           ACACAACAAAATCCATTTTCCCTTCGAGCAACGTTAATATAGTGAATTTCTGGGATTAAT
JMSF004N10+           ACACAACAAAATCCATTTTCCCTTCGAGCAACGTTAATATAGTGAATTTCTGGGATTAAT
                      ____________________________________________________________
consensus             ACACAACAAAATCCATTTTCCCTTCGAGCAACGTTAATATAGTGAATTTCTGGGATTAAT
 
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JMFS111C11+           GACAACTACACCGTCGCGATGCGCTCCTTTCTTCATCTACTCTGCGAGCATAAACCCTGA
JMSF004N10+           GACAACTACACCGTCGCGATGCGCTCCTTTCTTCATCTACTCTGCGAGCATAAACCCTGA
                      ____________________________________________________________
consensus             GACAACTACACCGTCGCGATGCGCTCCTTTCTTCATCTACTCTGCGAGCATAAACCCTGA
 
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JMFS111C11+           AACCTCCGCATGGAATTTCATGCCTT                                  
JMSF004N10+           AACCTCCGCATGGAATTTCATGCCTTGCCGATTCCACCGTCAAGACGTGTGTAAGAGCTC
                      ____________________________________________________________
consensus             AACCTCCGCATGGAATTTCATGCCTTGCCGATTCCACCGTCAAGACGTGTGTAAGAGCTC