Contig 007746:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N23Sequence501007746 (5)ref|XP_006471911.1|3e-19PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]528007746 (5)ref|XP_006471911.1|4e-19PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]
JMFN034B02Sequence628007746 (5)ref|XP_006471911.1|8e-19PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]
JMSF004L14Sequence402007746 (5)ref|XP_006471911.1|3e-18PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]277001082 (7)
JMSF048M12Sequence674007746 (5)ref|XP_006471911.1|1e-18PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]

Alignment

This contig is upended


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JMSF048M12+                                                         AACTGCATATCTAG
                      ____________________________________________________________
consensus                                                           AACTGCATATCTAG
 
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JMFN034B02+                           CTAGTATTTAATACTATTTCTAGAAATATAAGCAGAAAACACCA
JMSF048M12+           AGCCTNGCACCTATAGCTAGTATTTAATACTATTTCTAGAAATATAAGCAGAAAACACCA
                      ____________________________________________________________
consensus             AGCCTNGCACCTATAGCTAGTATTTAATACTATTTCTAGAAATATAAGCAGAAAACACCA
 
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JMFN034B02+           CACCACCAAACACATAATCACTCTGGCTGCAGCTGGCTCTTTCCTGAAGAAACATCAAGG
JMSF048M12+           CACCACCAAACACATAATCACTCTGGCTGCAGCTGGCTCTTTCCTGAAGAAACATCAAGG
                      ____________________________________________________________
consensus             CACCACCAAACACATAATCACTCTGGCTGCAGCTGGCTCTTTCCTGAAGAAACATCAAGG
 
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JMFN034B02+           ATTGCTGACACATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
JMFF002N23+                                                 CAATATATATAATTAATCTGAA
rJMFF002N23-                     ATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
JMSF048M12+           ATTGCTGACACATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
                      ____________________________________________________________
consensus             ATTGCTGACACATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
 
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JMFN034B02+           GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
JMFF002N23+           GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
rJMFF002N23-          GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
JMSF048M12+           GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
                      ____________________________________________________________
consensus             GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
 
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JMFN034B02+           TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
JMFF002N23+           TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
rJMFF002N23-          TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
JMSF048M12+           TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
JMSF004L14+                             GGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
                      ____________________________________________________________
consensus             TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
 
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JMFN034B02+           GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
JMFF002N23+           GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
rJMFF002N23-          GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
JMSF048M12+           GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
JMSF004L14+           GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
                      ____________________________________________________________
consensus             GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
 
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JMFN034B02+           AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
JMFF002N23+           AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
rJMFF002N23-          AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
JMSF048M12+           AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
JMSF004L14+           AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
                      ____________________________________________________________
consensus             AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
 
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JMFN034B02+           AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
JMFF002N23+           AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
rJMFF002N23-          AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
JMSF048M12+           AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
JMSF004L14+           AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
                      ____________________________________________________________
consensus             AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
 
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JMFN034B02+           GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCANG
JMFF002N23+           GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
rJMFF002N23-          GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
JMSF048M12+           GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
JMSF004L14+           GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
                      ____________________________________________________________
consensus             GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
 
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JMFN034B02+           GNNTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
JMFF002N23+           GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
rJMFF002N23-          GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
JMSF048M12+           GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
JMSF004L14+           GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
                      ____________________________________________________________
consensus             GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
 
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JMFN034B02+           GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTG                
JMFF002N23+           GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTT   
rJMFF002N23-          GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTT   
JMSF048M12+           GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTT   
JMSF004L14+           GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTTGTC
                      ____________________________________________________________
consensus             GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTTGTC