Contig 007740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003D18Sequence308007740 (3)470013880 (2)ref|XP_002266433.1|8e-23PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Vitis vinifera]
JMSF004H03Sequence356007740 (3)ref|XP_009613894.1|1e-04PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]306013880 (2)
JMSF038O08Sequence695007740 (3)ref|XP_009613894.1|2e-14PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]920021546emb|CBI25594.3|1e-80unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF038O08+ CAGGTGATGGAGATTCAATACCCCCATGGGATGGAGTGCTAAATTGAGTGGACACAGCAC
                      ____________________________________________________________
consensus CAGGTGATGGAGATTCAATACCCCCATGGGATGGAGTGCTAAATTGAGTGGACACAGCAC
 
. : . : . : . : . : . :
JMSF038O08+ AAATCAGTGACCCATCATCATCCCTTGTACTAGCTGTTTCAGAGTTATCCGCATTTTCCA
                      ____________________________________________________________
consensus AAATCAGTGACCCATCATCATCCCTTGTACTAGCTGTTTCAGAGTTATCCGCATTTTCCA
 
. : . : . : . : . : . :
JMSF038O08+ TTCTATATAGAGAGATTGGAAAGGGTTGATCCCCTGGGGCAGTATGAGTAGTTTCACTAC
                      ____________________________________________________________
consensus TTCTATATAGAGAGATTGGAAAGGGTTGATCCCCTGGGGCAGTATGAGTAGTTTCACTAC
 
. : . : . : . : . : . :
JMSF038O08+ GAATACTATTGGGAGCTACTTCCTTATTCTCAGAAAAGCTTCGTCCTGTATCACTGGCAT
                      ____________________________________________________________
consensus GAATACTATTGGGAGCTACTTCCTTATTCTCAGAAAAGCTTCGTCCTGTATCACTGGCAT
 
. : . : . : . : . : . :
JMSF038O08+ TGACATTGCTTGGACCATCTACCACATTGCCAGCAGATGAAACTCCACTTTCAATTTTAG
                      ____________________________________________________________
consensus TGACATTGCTTGGACCATCTACCACATTGCCAGCAGATGAAACTCCACTTTCAATTTTAG
 
. : . : . : . : . : . :
JMSF004H03+ TTAAGCTTTTTTGGCCTAATGT
JMSF038O08+ AGCAAGTAAAGGAAGCACCAGAACGCCTCCTTGGGGCCTTAAGCTTTTTTGGCCTAATGT
                      ____________________________________________________________
consensus AGCAAGTAAAGGAAGCACCAGAACGCCTCCTTGGGGCCTTAAGCTTTTTTGGCCTAATGT
 
. : . : . : . : . : . :
JMSF004H03+ GTTTTGCAGAATTGACCAGCAAATGATCTTCTATCTGATCATGGGGCGAGTCGGAAGGAG
JMSF038O08+ GTTTTGCAGAATTGACCAGCAAATGATCTTCTATCTGATCATGGGGCGAGTCGGAAGGAG
JMSF003D18+ AAGGAG
                      ____________________________________________________________
consensus GTTTTGCAGAATTGACCAGCAAATGATCTTCTATCTGATCATGGGGCGAGTCGGAAGGAG
 
. : . : . : . : . : . :
JMSF004H03+ AAGCACCGCAGATTAAAAGAGAAGAGAGGGTTCGTTTGACGCTGCGGTTGCGGGAGGGGC
JMSF038O08+ AAGCACCGCAGATTAAAAGAGAAGAGAGGGTTCGTTTGACGCTGCGGTTGCGGGAGGGGC
JMSF003D18+ AAGCACCGCAGATTAAAAGAGAAGAGAGGGTTCGTTTGACGCTGCGGTTGCGGGAGGGGC
                      ____________________________________________________________
consensus AAGCACCGCAGATTAAAAGAGAAGAGAGGGTTCGTTTGACGCTGCGGTTGCGGGAGGGGC
 
. : . : . : . : . : . :
JMSF004H03+ GATGGGGTCGCGAACCCAGACGGCTACCGCCGGAACCCATCGGACCCAAGAAGCCCCTCC
JMSF038O08+ GATGGGGTCGCGAACCCAGACGGCTACCGCCGGAACCCATCGGACCCAAGAAGCCCCTCC
JMSF003D18+ GATGGGGTCGCGAACCCAGACGGCTACCGCCGGAACCCATCGGACCCAAGAAGCCCCTCC
                      ____________________________________________________________
consensus GATGGGGTCGCGAACCCAGACGGCTACCGCCGGAACCCATCGGACCCAAGAAGCCCCTCC
 
. : . : . : . : . : . :
JMSF004H03+ TCCGTTTCCGTGATCTCTTCCTCTTCCTTCAAGGGAGAGCGATTGGTGGGAGAGGTGAAG
JMSF038O08+ TCCGTTTCCGTGATCTCTTCCTCTTCCTTCAAGGGAGAGCGATTGGTGGGAGAGGTGAAG
JMSF003D18+ TCCGTTTCCGTGATCTCTTCCTCTTCCTTCAAGGGAGAGCGATTGGTGGGAGAGGTGAAG
                      ____________________________________________________________
consensus TCCGTTTCCGTGATCTCTTCCTCTTCCTTCAAGGGAGAGCGATTGGTGGGAGAGGTGAAG
 
. : . : . : . : . : . :
JMSF004H03+ GGGAAGAGGAAAGGAATGGTGATTATGTGAAAATGAGAGAGAGTGCCGCGTGGTGTGAAC
JMSF038O08+ GGGAAGAGGAAAGGAATGGTGATTATGTGAAAATGAGAGAGAGTGCCGCGTGGTGTGAAC
JMSF003D18+ GGGAAGAGGAAAGGAATGGTGATTATGTGAAAATGAGAGAGAGTGCCGCGTGGTGTGAAC
                      ____________________________________________________________
consensus GGGAAGAGGAAAGGAATGGTGATTATGTGAAAATGAGAGAGAGTGCCGCGTGGTGTGAAC
 
. : . : . : . : . : . :
JMSF004H03+ CACACAGCTCACAGGTGAGGTGAGATGTCGCCC
JMSF038O08+ CACACAGCTCACAGGTGAGGTGAGATGTCGCCC
JMSF003D18+ CACACAGCTCACAGGTGAGGTGAGATGTCGCCCAGTGAATCAGCTGCTTTTGCGTTCCTC
                      ____________________________________________________________
consensus CACACAGCTCACAGGTGAGGTGAGATGTCGCCCAGTGAATCAGCTGCTTTTGCGTTCCTC