Contig 007739:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002D16Sequence227007739 (2)723002747 (2)ref|XP_009796942.1|5e-118PREDICTED: psbP domain-containing protein 6, chloroplastic [Nicotiana sylvestri
JMSF003B09Sequence226007739 (2)685002747 (2)ref|XP_009796942.1|1e-111PREDICTED: psbP domain-containing protein 6, chloroplastic [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF002D16+                                     CGTCGACGGCGGAGGAGGAATGGCGACTAGCGGC
                      ____________________________________________________________
consensus                                       CGTCGACGGCGGAGGAGGAATGGCGACTAGCGGC
 
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JMSF002D16+           ATCAAACCCAGCCCTACATTCAACAAATCTCTTCTTGAAATGTTGGTCGTTGTCTGCTTC
JMSF003B09+                         TACATTCAACNAATCTCTTCTTGAAATGTTGGTCGTTGTCTGCTTC
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consensus             ATCAAACCCAGCCCTACATTCAACAAATCTCTTCTTGAAATGTTGGTCGTTGTCTGCTTC
 
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JMSF002D16+           GAGCTCCGATGGGTTTTGACGGAGAAGGGGGAGGAAGGCGACGGCGGCTTCGGATTCGAA
JMSF003B09+           GAGCTCCGATGGGTTTTGACGGAGAAGGGGGAGGAAGGCGACGGCGGCTTCGGATTCGAA
                      ____________________________________________________________
consensus             GAGCTCCGATGGGTTTTGACGGAGAAGGGGGAGGAAGGCGACGGCGGCTTCGGATTCGAA
 
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JMSF002D16+           GTTGAAGAGGTTGCGGAGGAGAGCATGGAGGGCAGTAGCCTGGCTACTGAGATCGCCATT
JMSF003B09+           GTTGAAGAGGTTGCGGAGGAGAGCATGGAGGGCAGTAGCCTGGCTACTGAGATCGCCATT
                      ____________________________________________________________
consensus             GTTGAAGAGGTTGCGGAGGAGAGCATGGAGGGCAGTAGCCTGGCTACTGAGATCGCCATT
 
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JMSF002D16+           TTCGCTGTGCGT                                                
JMSF003B09+           TTCGCTGTGCGTGAGATTTGGGAGGATGAAATGAGGTGGTTGTACTCCCGCTATTATCCC
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consensus             TTCGCTGTGCGTGAGATTTGGGAGGATGAAATGAGGTGGTTGTACTCCCGCTATTATCCC