Contig 007738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K12Sequence530007738 (10)gb|AIY35292.1|2e-47fasciclin-like arabinogalactan 12 [Gossypium hirsutum]
JMFF020D01Sequence514007738 (10)gb|AIY35292.1|8e-44fasciclin-like arabinogalactan 12 [Gossypium hirsutum]
JMSF002P11Sequence260007738 (10)ref|XP_004306902.1|5e-12PREDICTED: fasciclin-like arabinogalactan protein 10 [Fragaria vesca subsp. ves
JMSF012A11Sequence450007738 (10)ref|XP_007052018.1|5e-33FASCICLIN-like arabinogalactan protein 8 [Theobroma cacao] gb|EOX96175.1| FASCIC
JMSF012O12Sequence450007738 (10)ref|XP_007052018.1|5e-33FASCICLIN-like arabinogalactan protein 8 [Theobroma cacao] gb|EOX96175.1| FASCIC
JMSF013O09Sequence310007738 (10)gb|AIY35292.1|3e-14fasciclin-like arabinogalactan 12 [Gossypium hirsutum]
JMSF014A15Sequence345007738 (10)gb|AIY35292.1|2e-21fasciclin-like arabinogalactan 12 [Gossypium hirsutum]141019267
JMSF029L21Sequence658007738 (10)ref|XP_007052018.1|1e-71FASCICLIN-like arabinogalactan protein 8 [Theobroma cacao] gb|EOX96175.1| FASCIC
JMSF030L21Sequence616007738 (10)gb|AIY35292.1|3e-63fasciclin-like arabinogalactan 12 [Gossypium hirsutum]
JMSF043L21Sequence474007738 (10)ref|XP_007052018.1|9e-37FASCICLIN-like arabinogalactan protein 8 [Theobroma cacao] gb|EOX96175.1| FASCIC

Alignment

This contig is upended


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JMSF029L21+           ACATCCAGCTTTCTCAAGAGCGCCGGTGAGGTTATAATCCGACGGCGACGGCGCCGGAGC
JMSF030L21+                                                     CGGCGACGGCGCCGGAGC
                      ____________________________________________________________
consensus             ACATCCAGCTTTCTCAAGAGCGCCGGTGAGGTTATAATCCGACGGCGACGGCGCCGGAGC
 
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JMSF029L21+           ATTCAAAACCGCAGGGACAACAATAGGAGTACTGATCTCAATCACCGAAATATTAAACGG
JMSF030L21+           ATTCAAAACCGCAGGGACAACAATAGGAGTACTGATCTCAATCACCGAAATATTAAACGG
                      ____________________________________________________________
consensus             ATTCAAAACCGCAGGGACAACAATAGGAGTACTGATCTCAATCACCGAAATATTAAACGG
 
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JMSF029L21+           GATTTGCTTAACAGACTTGGTGTACTGAGACGCCAATGGCGACCCGGGAAGCGCAGATCC
JMFF020D01+                                  ACTGAGACGCCAATGGCGACCCGGGAAGCGCAGATCC
JMFF001K12+                  TTAACAGACTTGGTGTACTGAGACGCCAATGGCGACCCGGGAAGCGCAGATCC
JMSF030L21+           GATTTGCTTAACAGACTTGGTGTACTGAGACGCCAATGGCGACCCGGGAAGCGCAGATCC
                      ____________________________________________________________
consensus             GATTTGCTTAACAGACTTGGTGTACTGAGACGCCAATGGCGACCCGGGAAGCGCAGATCC
 
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JMSF029L21+           GAACCCGACTTTCCCACCTTTCTGATCCGTAATGTTAACGAACCCCAAGTTCCCCGGCGC
JMFF020D01+           GAACCCGACTTTCCCACCTTTNTGATCCGTAATGTTAACGAACCCCAAGTTCCCCGGCGC
JMSF043L21+               CCGACTTTCCCACCTTTNTGATCCNTAATGTTAACGAACCCCAAGTTCCCCGGCGC
JMFF001K12+           GAACCCGACTTTCCCACCTTTCTGATCCGTAATGTTAACGAACCCCAAGTTCCCCGGCGC
JMSF012A11+                                       GTAATGTTAACGAACCCCAAGTTCCCCGGCGC
JMSF012O12+                                       GTAATGTTAACGAACCCCAAGTTCCCCGGCGC
JMSF030L21+           GAACCCGACTTTCCCACCTTTCTGATCCGTAATGTTAACGAACCCCAAGTTCCCCGGCGC
                      ____________________________________________________________
consensus             GAACCCGACTTTCCCACCTTTCTGATCCGTAATGTTAACGAACCCCAAGTTCCCCGGCGC
 
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JMSF029L21+           ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
JMFF020D01+           ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
JMSF043L21+           ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
JMFF001K12+           ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
JMSF012A11+           ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
JMSF012O12+           ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
JMSF030L21+           ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
                      ____________________________________________________________
consensus             ATTGCCGGTGGTCTGGTATAAAGTGGTGGAGAGAGTGGTCCCCTTGGAGATATCATGGAG
 
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JMSF029L21+           CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
JMFF020D01+           CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
JMSF043L21+           CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
JMSF014A15+                       CCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
JMFF001K12+           CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
JMSF012A11+           CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
JMSF012O12+           CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
JMSF013O09+                                                           CTTGACGACGGA
JMSF030L21+           CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
                      ____________________________________________________________
consensus             CTTATCTCCATCCCAGTAGTCAAGCAAGACGTGAAGCTCTAGAACATTCTTGACGACGGA
 
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JMSF029L21+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMFF020D01+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMSF043L21+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMSF014A15+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMFF001K12+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMSF012A11+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMSF012O12+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMSF013O09+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMSF030L21+           AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
JMSF002P11+                                                   GTCAAAACCAGGACGGTGAC
                      ____________________________________________________________
consensus             AAGTGGGTGCTTGCCGGTAATGGAGGAGAAAGCGCCGTTGGTCAAAACCAGGACGGTGAC
 
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JMSF029L21+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMFF020D01+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMSF043L21+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMSF014A15+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMFF001K12+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMSF012A11+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMSF012O12+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMSF013O09+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMSF030L21+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
JMSF002P11+           GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
                      ____________________________________________________________
consensus             GGTGGTCCGGGTGTTGATCTCGTCGGCGAGCTTAGTTCGGGAGAGGTAGTCGTTGAACTG
 
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JMSF029L21+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMFF020D01+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMSF043L21+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMSF014A15+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMFF001K12+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMSF012A11+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMSF012O12+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMSF013O09+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMSF030L21+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
JMSF002P11+           GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
                      ____________________________________________________________
consensus             GCTGTACTCCGGGTGACCTTCCAGGATGGCGGTGATGTTGTGGGCGGCGCTAACGGCGCA
 
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JMSF029L21+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMFF020D01+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMSF043L21+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMSF014A15+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMFF001K12+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMSF012A11+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMSF012O12+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMSF013O09+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMSF030L21+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
JMSF002P11+           GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
                      ____________________________________________________________
consensus             GGAAACGGCAATGACGGCGGCCGTGAAGAGGAGGAGGTGGCGAACTGAACCCATGGTGCA
 
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JMSF029L21+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACT   
JMFF020D01+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACT   
JMSF043L21+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAAC    
JMSF014A15+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAAC    
JMFF001K12+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACT   
JMSF012A11+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACT   
JMSF012O12+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAAC    
JMSF013O09+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACT   
JMSF030L21+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACT   
JMSF002P11+           CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACTGAC
                      ____________________________________________________________
consensus             CGTTAGCCAAGACCAGTGAACTACTCACTATACTGAAACTCAGAGTGAAGAAGAACTGAC