Contig 007735:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002H12Sequence260007735 (3)783024443ref|XP_009592353.1|119PREDICTED: uncharacterized protein LOC104089213 [Nicotiana tomentosiformis]
JMSF009J16Sequence360007735 (3)784012530 (2)ref|XP_009592353.1|190PREDICTED: uncharacterized protein LOC104089213 [Nicotiana tomentosiformis]
JMSF039M10Sequence663007735 (3)ref|XP_008384838.1|92.0PREDICTED: uncharacterized protein LOC103447430 [Malus domestica]922012530 (2)ref|XP_009592353.1|225PREDICTED: uncharacterized protein LOC104089213 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF039M10+                                                                    CCA
                      ____________________________________________________________
consensus                                                                      CCA
 
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JMSF039M10+           CCACATCAAAAGGTTTCTGATTATCGGAAAACATGGCACCAGAATAACTCCCTGGTTCTT
                      ____________________________________________________________
consensus             CCACATCAAAAGGTTTCTGATTATCGGAAAACATGGCACCAGAATAACTCCCTGGTTCTT
 
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JMSF039M10+           GAGAAAATTCCTCGTTCGAGAAAGAACTTAGGCTACCACTGCAGGCTCGTCGGATCAATC
                      ____________________________________________________________
consensus             GAGAAAATTCCTCGTTCGAGAAAGAACTTAGGCTACCACTGCAGGCTCGTCGGATCAATC
 
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JMSF039M10+           GGACCCGGCGGTTCGGGTACTGACACGATCGGGACCGGGAGAGGTTCGGCGAATGAGCTC
                      ____________________________________________________________
consensus             GGACCCGGCGGTTCGGGTACTGACACGATCGGGACCGGGAGAGGTTCGGCGAATGAGCTC
 
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JMSF039M10+           CGAACAAACCGGACCGTTCACTACATATCAAACTACGTCGTTTCTGGGAAGGAGATGAAA
                      ____________________________________________________________
consensus             CGAACAAACCGGACCGTTCACTACATATCAAACTACGTCGTTTCTGGGAAGGAGATGAAA
 
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JMSF009J16+                                                                GACCAAT
JMSF039M10+           TTACCGACGCGAGGGTTTGAGCAAAAGACGGCGACCGAGAAACCGAAGGCTGTGACCAAT
                      ____________________________________________________________
consensus             TTACCGACGCGAGGGTTTGAGCAAAAGACGGCGACCGAGAAACCGAAGGCTGTGACCAAT
 
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JMSF009J16+           GCAAACACGTCGCCGCCGCCGCCGCAACTTTCACTCCCATTTTCTCACTCACCCGAAAAG
JMSF039M10+           GCAAACACGTCGCCGCCGCCGCCGCAACTTTCACTCCCATTTTCTCACTCACCCGAAAAG
                      ____________________________________________________________
consensus             GCAAACACGTCGCCGCCGCCGCCGCAACTTTCACTCCCATTTTCTCACTCACCCGAAAAG
 
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JMSF009J16+           CTAAACAGACTTCCAATTCAAACTAACAACAAT-AAGCTTCCCGAAAAGTTTACTAAATC
JMSF039M10+           CTAAACAGACTTCCAATTCAAACTAACAACAATAAAGCTTCCCGAAAAGTTTACTAAATC
JMSF002H12+                                                   CCCGAAAAGTTTACTAAATC
                      ____________________________________________________________
consensus             CTAAACAGACTTCCAATTCAAACTAACAACAATAAAGCTTCCCGAAAAGTTTACTAAATC
 
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JMSF009J16+           CCAGAAATATCTTGATCCGGATTTAGAAAAAGTTTCCAACTTTCATGCTTTTTTCAATCG
JMSF039M10+           CCAGAAATATCTTGATCCGGATTTAGAAAAAGTTTCCAACTTTCATGCTTTTTTCAATCG
JMSF002H12+           CCAGAAATATCTTGATCCGGATTTAGAAAAAGTTTCCAACTTTCATGCTTTTTTCAATCG
                      ____________________________________________________________
consensus             CCAGAAATATCTTGATCCGGATTTAGAAAAAGTTTCCAACTTTCATGCTTTTTTCAATCG
 
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JMSF009J16+           GAAATCGAACGCTGCCGGGATATCGAAGGCGTTTGTTCAGTTCTCCGGCGAGCCGAGGTT
JMSF039M10+           GAAATCGAACGCTGCCGGGATATCGAAGGCGTTTGTTCAGTTCTCCGGCGAGCCGAGGTT
JMSF002H12+           GAAATCGAACGCTGCCGGGATATCGAAGGCGTTTGTTCAGTTCTCCGGCGAGCCGAGGTT
                      ____________________________________________________________
consensus             GAAATCGAACGCTGCCGGGATATCGAAGGCGTTTGTTCAGTTCTCCGGCGAGCCGAGGTT
 
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JMSF009J16+           TCCGGCGGAAGCCTTTTTATGGAAGGAAGAAGCACGAACGCTGTACCTTCAGTTTTAGAG
JMSF039M10+           TCCGGCGGAAGCCTTTTTATGGAAGGAAGAAGCACGAACGCTGTACCTTCAGTTTTAGAG
JMSF002H12+           TCCGGCGGAAGCCTTTTTATGGAAGGAAGAAGCACGAACGCTGTACCTTCAGTTTTAGAG
                      ____________________________________________________________
consensus             TCCGGCGGAAGCCTTTTTATGGAAGGAAGAAGCACGAACGCTGTACCTTCAGTTTTAGAG
 
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JMSF009J16+           AAGAGTGGCCATGGGAGATAGATATTCTTTATGCACACAACTACACAAGTGAC       
JMSF039M10+           AAGAGTGGCCATGGGAGATAGATATTCTTTATGCACACAACTACACAAGTGAC       
JMSF002H12+           AAGAGTGGCCATGGGAGATAGATATTCTTTATGCACACAACTACACAAGTGACAGAGGCC
                      ____________________________________________________________
consensus             AAGAGTGGCCATGGGAGATAGATATTCTTTATGCACACAACTACACAAGTGACAGAGGCC