Contig 007734:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015N06Sequence549007734 (6)gb|KDP46269.1|3e-85hypothetical protein JCGZ_10109 [Jatropha curcas]727001095 (6)ref|XP_006357196.1|218PREDICTED: uncharacterized protein LOC102603984 [Solanum tuberosum]
JMFF015N17Sequence117007734 (6)ref|XP_009404757.1|73.6PREDICTED: uncharacterized protein LOC103987995 [Musa acuminata subsp. malaccen
JMFF018H09Sequence545007734 (6)gb|KJB76385.1|8e-85hypothetical protein B456_012G086100 [Gossypium raimondii]779001095 (6)ref|XP_006357196.1|223PREDICTED: uncharacterized protein LOC102603984 [Solanum tuberosum]
JMSF002G01Sequence396007734 (6)ref|XP_006373207.1|1e-24hypothetical protein POPTR_0017s09660g [Populus trichocarpa] gb|ERP51004.1| hypo
JMSF028L08Sequence677007734 (6)gb|KDO63910.1|3e-111hypothetical protein CISIN_1g007654mg [Citrus sinensis] gb|KDO63911.1| hypotheti756001095 (6)ref|XP_006357196.1|211PREDICTED: uncharacterized protein LOC102603984 [Solanum tuberosum]
JMSF031G15Sequence681007734 (6)ref|XP_009606507.1|195PREDICTED: uncharacterized protein LOC104100862 [Nicotiana tomentosiformis]767001095 (6)ref|XP_006357196.1|220PREDICTED: uncharacterized protein LOC102603984 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF018H09+                                                       GGAACACTTGGTTCTT
JMFF015N06+                                                   GGCTGGAACACTTGGTTCTT
                      ____________________________________________________________
consensus                                                     GGCTGGAACACTTGGTTCTT
 
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JMFF018H09+           GGTTACAAGTCACGAAGATTGGGATCACAATGGGAACCAATAGAAGAACAAACAAAACGA
JMFF015N06+           GGTTACAAGTCACGAAGATTGGGATCACAATGGGAACCAATAGAAGAACAAACAAAACGA
                      ____________________________________________________________
consensus             GGTTACAAGTCACGAAGATTGGGATCACAATGGGAACCAATAGAAGAACAAACAAAACGA
 
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JMFF018H09+           TGGTGAAAATCATTACATTTGTATTGCTGACATTTACTAGATCTTCAACAAGCATTACAC
JMFF015N06+           TGGTGAAAATCATTACATTTGTATTGCTGACATTTACTAGATCTTCAACAAGCATTACAC
                      ____________________________________________________________
consensus             TGGTGAAAATCATTACATTTGTATTGCTGACATTTACTAGATCTTCAACAAGCATTACAC
 
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JMFF018H09+           CCATCAAGTATGCAGCCAGAAGGAGACACACACTGTAAATGAATGTGAAACTCAACCCAT
JMFF015N06+           CCATCAAGTATGCAGCCAGAAGGAGACACACACTGTAAATGAATGTGAAACTCAACCCAT
                      ____________________________________________________________
consensus             CCATCAAGTATGCAGCCAGAAGGAGACACACACTGTAAATGAATGTGAAACTCAACCCAT
 
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JMFF018H09+           CAGTACTTCGGATCTGTCTGTGACCTCCAACAGGCCTGATCAAAAACATGAGCGAAATTA
JMFF015N06+           CAGTACTTCGGATCTGTCTGTGACCTCCAACAGGCCTGATCAAAAACATGAGCGAAATTA
JMSF031G15+                                    TCCAACAGGCCTGATCAAAAACATGAGCGAAATTA
JMSF028L08+                                              CTGATCAAAAACATGAGCGAAATTA
                      ____________________________________________________________
consensus             CAGTACTTCGGATCTGTCTGTGACCTCCAACAGGCCTGATCAAAAACATGAGCGAAATTA
 
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JMFF018H09+           TGACTATTGCCGGTCCAACTGCAATCATAAATACAAGCGAGGCATGATCCGGAGAATGGA
JMFF015N06+           TGACTATTGCCGGTCCAACTGCAATCATAAATACAAGCGAGGCATGATCCGGAGAATGGA
JMSF031G15+           TGACTATTGCCGGTCCAACTGCAATCATAAATACAAGCGAGGCATGATCCGGAGAATGGA
JMSF028L08+           TGACTATTGCCGGTCCAACTGCAATCATAAATACAAGCGAGGCATGATCCGGAGAATGGA
                      ____________________________________________________________
consensus             TGACTATTGCCGGTCCAACTGCAATCATAAATACAAGCGAGGCATGATCCGGAGAATGGA
 
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JMFF018H09+           TTAGCGTATATATTTGTGTCAAAATAGCACCACTCAGTCCTGCAAAACCCTTGAGTATTC
JMFF015N06+           TTAGCGTATATATTTGTGTCAAAATAGCACCACTCAGTCCTGCAAAACCCTTGAGTATTC
JMSF031G15+           TTAGCGTATATATTTGTGTCAAAATAGCACCACTCAGTCCTGCAAAACCCTTGAGTATTC
JMSF028L08+           TTAGCGTATATATTTGTGTCAAAATAGCACCACTCAGTCCTGCAAAACCCTTGAGTATTC
                      ____________________________________________________________
consensus             TTAGCGTATATATTTGTGTCAAAATAGCACCACTCAGTCCTGCAAAACCCTTGAGTATTC
 
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JMFF015N17+                                                              CCGCAGTAT
JMFF018H09+           CCACCACAGGACCACGGCTTTTGGGGAAATTTTGCACCCCTGAGACAAGAGCCGCAGTAT
JMFF015N06+           CCACCACAGGACCACGGCTTTTGGGGAAATTTTGCACCCCTGAGACAAGAGCCGCAGTAT
JMSF031G15+           CCACCACAGGACCACGGCTTTTGGGGAAATTTTGCACCCCTGAGACAAGAGCCGCAGTAT
JMSF028L08+           CCACCACAGGACCACGGCTTTTGGGGAAATTTTGCACCCCTGAGACAAGAGCCGCAGTAT
                      ____________________________________________________________
consensus             CCACCACAGGACCACGGCTTTTGGGGAAATTTTGCACCCCTGAGACAAGAGCCGCAGTAT
 
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JMFF015N17+           TAAAATAGGTCTCACCANTTGTTCCCACAAATATGAGAACACACATAGCCCATATTGGCA
JMFF018H09+           TAAAATAGGTCTCACCATTTGTTCCCACAAATATGAGAACACACATAGCCCATATTGGCA
JMFF015N06+           TAAAATAGGTCTCACCATTTGTTCCCACAAATATGAGAACACACATAGCCCATATTGGCA
JMSF031G15+           TAAAATAGGTCTCACCATTTGTTCCCACAAATATGAGA--ACACATAGCCCATATTGGCA
JMSF028L08+           TAAAATAGGTCTCACCATTTGTTCCCACAAATATGAGAACACACATAGCCCATATTGGCA
                      ____________________________________________________________
consensus             TAAAATAGGTCTCACCATTTGTTCCCACAAATATGAGAACACACATAGCCCATATTGGCA
 
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JMFF015N17+           AGGCAGGAAGTCGGCCGGTGATGATGAGCCAANCCCAACCATA                 
JMFF018H09+           AGGCAGGAAGTCGGCCGGTGATGATGAGCCAAACCCAACCATACCCAA            
JMFF015N06+           AGGCAGGAAGTCGGCCGGTGATGATGAGCCAAACCCAACCATAACCAA            
JMSF031G15+           AGGCAGGAAGTCGGCCGGTGATGATGAGCCAAACCCAACCATACCCAACAAAATTCTGGG
JMSF028L08+           AGGCAGGAAGTCGGCCGGTGATGATGAGCCAAACCCAACCATACCCAACAAAATTCTGGG
                      ____________________________________________________________
consensus             AGGCAGGAAGTCGGCCGGTGATGATGAGCCAAACCCAACCATACCCAACAAAATTCTGGG
 
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JMSF031G15+           CAACACCAACAAGAAGAACAGCCCAGAGCGGCAAGATCTCAGACAAAGTTCCGGCCAAGA
JMSF028L08+           CAACACCAACAAGAAGAACAGCCCAGAGCGGCAAGATCTCAGACAAAGTTCCGGCCAAGA
                      ____________________________________________________________
consensus             CAACACCAACAAGAAGAACAGCCCAGAGCGGCAAGATCTCAGACAAAGTTCCGGCCAAGA
 
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JMSF031G15+           ACCCGACACTGTCCCCCAAGTCCTTAGCCACACCCAGACTGGATAACTGCTTCTGATTGT
JMSF028L08+           ACCCGACACTGTCCCCCAAGTCCTTAGCCACACCCAGACTGGATAACTGCTTCTGATTGT
JMSF002G01+                                   TAGCCACACCCAGACTGGATAACTGCTTCTGATTGT
                      ____________________________________________________________
consensus             ACCCGACACTGTCCCCCAAGTCCTTAGCCACACCCAGACTGGATAACTGCTTCTGATTGT
 
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JMSF031G15+           AGCCCATAGTGCTCTTGATAATGGGCGAAATGCTCCCGAACAGATACCCAACCCCGGCGC
JMSF028L08+           AGCCCATAGTGCTCTTGATAATGGGCGAAATGCTCCCGAACAGATACCCAATCCCGGCGC
JMSF002G01+           AGCCCATAGTGCTCTTGATAATGGGCGAAATGCTCCCGAACAGATACCCAATCCCGGCGC
                      ____________________________________________________________
consensus             AGCCCATAGTGCTCTTGATAATGGGCGAAATGCTCCCGAACAGATACCCAATCCCGGCGC
 
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JMSF031G15+           AAGTCTGAACCCACATTGACGCCACGAACACCAGCCATCTGTTGCTGAAGAAGGAGTTGA
JMSF028L08+           AAGTCTGAACCCACATTGACGCCACGAACACCAGCCATCTGTTGCTGAAGAAGGAGTTGA
JMSF002G01+           AAGTCTGAACCCACATTGACGCCACGAACACCAGCCATCTGTTGCTGAAGAAGGAGTTGA
                      ____________________________________________________________
consensus             AAGTCTGAACCCACATTGACGCCACGAACACCAGCCATCTGTTGCTGAAGAAGGAGTTGA
 
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JMSF031G15+           CTTTTTCCTTCAAGCGACCCACCATGATTGTTGCTACTTTATCTTGAGTCGATTTTCTAG
JMSF028L08+           CTTTTTCCTTCAAGCGACCCACCATGATTGTTGCTACTTTATCTTGAGTCGATTTTCTAG
JMSF002G01+           CTTTTTCCTTCAAGCGACCCACCATGATTGTTGCTACTTTATCTTGAGTCGATTTTCTAG
                      ____________________________________________________________
consensus             CTTTTTCCTTCAAGCGACCCACCATGATTGTTGCTACTTTATCTTGAGTCGATTTTCTAG
 
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JMSF031G15+           CTTTGATCTTTCTCTGGGAGGTCGACAATGGTGTATTGCGATACGGC             
JMSF028L08+           CTTTGATCTTTCTCTGGGAGGTCGACAATGGTGTATTGCGATACGGC             
JMSF002G01+           CTTTGATCTTTCTCTGGAAGGTCGACAATGGTGTATTGCGATACGGCAGCTAGACTATAA
                      ____________________________________________________________
consensus             CTTTGATCTTTCTCTGGGAGGTCGACAATGGTGTATTGCGATACGGCAGCTAGACTATAA
 
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JMSF002G01+           GGAAACGTGGGAGACTTTATGAATGCACGTTTCAATAAGCCTATATCGGATATATCTGAA
                      ____________________________________________________________
consensus             GGAAACGTGGGAGACTTTATGAATGCACGTTTCAATAAGCCTATATCGGATATATCTGAA
 
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JMSF002G01+           ATCGACAGATTGTGTATGAATCATGAGCATTGAGTTCATATCTTGATGGAGGTAAGACCC
                      ____________________________________________________________
consensus             ATCGACAGATTGTGTATGAATCATGAGCATTGAGTTCATATCTTGATGGAGGTAAGACCC