Contig 007732:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043K02+                                                      TTTTTTTTTTATTGAAA
                      ____________________________________________________________
consensus                                                        TTTTTTTTTTATTGAAA
 
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JMSF043K02+           TTCTTGATAGAATATCATACCAAAAAAAGTACATATATATATCCATCTCTATGAAGCCAC
rJMSF002A10-                                AAAAAAGTACATATATATATCCATCTCTATGAAGCCAC
                      ____________________________________________________________
consensus             TTCTTGATAGAATATCATACCAAAAAAAGTACATATATATATCCATCTCTATGAAGCCAC
 
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JMSF043K02+           TAATTAAGCTAGTAGCCGTTCGTTTTCTTGGATCTTCTCCATCATATCCCCTTTATCTTC
rJMSF002A10-          TAATTAAGCTAGTAGCCGTTCGTTTTCTTGGATCTTCTCCATCATATCCCCTTTATCTTC
                      ____________________________________________________________
consensus             TAATTAAGCTAGTAGCCGTTCGTTTTCTTGGATCTTCTCCATCATATCCCCTTTATCTTC
 
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JMSF043K02+           CTCGTTGCAATGCCTTCTCAGCAGTGTCCATCTCTTCCAAGATCCTCTGCTTCCTCTTCG
rJMSF002A10-          CTCGTTGCAATGCCTTCTCAGCAGTGTCCATCTCTTCCAAGATCCTCTGCTTCCTCTTCG
                      ____________________________________________________________
consensus             CTCGTTGCAATGCCTTCTCAGCAGTGTCCATCTCTTCCAAGATCCTCTGCTTCCTCTTCG
 
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JMSF043K02+           CCGGAATCGGCGCCGTGGGTCCGAAGCTGATATAATGGCCGGAGACGGCGTTGAGCGCCG
rJMSF002A10-          CCGGAATCGGCGCCGTGGGTCCGAAGCTGATATAATGGCCGGAGACGGCGTTGAGCGCCG
                      ____________________________________________________________
consensus             CCGGAATCGGCGCCGTGGGTCCGAAGCTGATATAATGGCCGGAGACGGCGTTGAGCGCCG
 
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JMSF043K02+           AGTACATGTCCCGGAACGACACGCGTCCGAGGAGCGCCTTCTCCCGCCGGTACTTCGCCA
rJMSF002A10-          AGTACATGTCCCGGAACGACACGCGTCCGAGGAGCGCCTTCTCCCGCCGGTACTTCGCCA
                      ____________________________________________________________
consensus             AGTACATGTCCCGGAACGACACGCGTCCGAGGAGCGCCTTCTCCCGCCGGTACTTCGCCA
 
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JMSF043K02+           CCCAAGAATTCGACGCCTGTCTTAGGTCAGCCACGGCGTCCGCAATGTCCGGGTCCCCTT
rJMSF002A10-          CCCAAGAATTCGACGCCTGTCTTAGGTCAGCCACGGCGTCCGCAATGTCCGGGTCCCCTT
                      ____________________________________________________________
consensus             CCCAAGAATTCGACGCCTGTCTTAGGTCAGCCACGGCGTCCGCAATGTCCGGGTCCCCTT
 
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JMSF043K02+           TGTTCTTCGCCATGGTGAATCTCACCTTTCCGATCACCTCCGTCGTGTCTTTCACGTACT
rJMSF002A10-          TGTTCTTCGCCATGGTGAATCTCACCTTTCCGATCACCTCCGTCGTGTCTTTCACGTACT
                      ____________________________________________________________
consensus             TGTTCTTCGCCATGGTGAATCTCACCTTTCCGATCACCTCCGTCGTGTCTTTCACGTACT
 
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JMSF043K02+           CATCGTCGGAAGCCGCCCGTGCAGGCGCGGCGGCGATGAGAATCCCCGGGGAGAGGACTC
rJMSF002A10-          CATCGTCGGAAGCCGCCCGTGCAGGCGCGGCGGCGATGAGAATCCCCGGGGAGAGGACTC
                      ____________________________________________________________
consensus             CATCGTCGGAAGCCGCCCGTGCAGGCGCGGCGGCGATGAGAATCCCCGGGGAGAGGACTC
 
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JMSF043K02+           CGGCGGCCAGAGAGAGGAACTCGCGGCGGGTGGATAGCGTGGCGGTGGAGGTGGTGGCGG
rJMSF002A10-          CGGCGGCCAGAGAGAGGAACTCGCGGCGGGTGGATAGCGTGGCGGTGGAGGTGGTGGCGG
JMSF002A10+            GGCGCCCAGAGAGAGGAACTCGCGNCGGGTGGATAGCGTGGCGGTGGAGGTGGTGGCGG
                      ____________________________________________________________
consensus             CGGCGGCCAGAGAGAGGAACTCGCGGCGGGTGGATAGCGTGGCGGTGGAGGTGGTGGCGG
 
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JMSF043K02+           AGATGAGTTTGGACCTGATGGGGGGTAGGAGGGGTTTAGGGGTGGAGGTGGTGGGGGTGA
rJMSF002A10-          AGATGAGTTTGGACCTGATGGGGGGTAGGAGGGGTTTAGGGGTGGAGGTGGTGGGGGTGA
JMSF002A10+           AGATGAGTTTGGACCTGATGGGGGGTAGGAGGGGTTTAGGGGTGGAGGTGGTGGGGGTGA
                      ____________________________________________________________
consensus             AGATGAGTTTGGACCTGATGGGGGGTAGGAGGGGTTTAGGGGTGGAGGTGGTGGGGGTGA
 
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JMSF043K02+           TTAGGGTTGGGGAAGCCATGGATAGTGGTGAGGTTCTTGGGAAA                
rJMSF002A10-          TTANGGTTGGGGAAGCCATGGATAGTGGTGAGGTTCTTGGGAAA                
JMSF002A10+           TTAGGGTTGGGGAAGCCATGGATAGTGGTGAGGTTCTTGGGAAAGAGAGAGGGAGAAGAG
                      ____________________________________________________________
consensus             TTAGGGTTGGGGAAGCCATGGATAGTGGTGAGGTTCTTGGGAAAGAGAGAGGGAGAAGAG
 
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JMSF002A10+           AAGAGGTTGTGGTTGAGGAAGAGAAAAGAGAAATATGGAAGGTGAAGTGGGCTTTTGCCC
                      ____________________________________________________________
consensus             AAGAGGTTGTGGTTGAGGAAGAGAAAAGAGAAATATGGAAGGTGAAGTGGGCTTTTGCCC