Contig 007729:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001L01Sequence451007729 (2)ref|XP_010677415.1|5e-15PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Beta vu697008623 (3)ref|XP_004245932.1|1e-93PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Solanum
JMSF041L16Sequence660007729 (2)ref|XP_010677415.1|3e-58PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Beta vu705008623 (3)ref|XP_009618552.1|1e-68PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Nicotia

Alignment

This contig is upended


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JMSF041L16+                                                               TANCCAGC
                      ____________________________________________________________
consensus                                                                 TANCCAGC
 
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JMSF041L16+           CCCCAANTAGAATGCCAAAAATCTTCACCCCTGAAGAAGCTGGAATGTCTTTAACAGCTA
                      ____________________________________________________________
consensus             CCCCAANTAGAATGCCAAAAATCTTCACCCCTGAAGAAGCTGGAATGTCTTTAACAGCTA
 
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JMSF041L16+           GAGGCAAGACCACCAAAGAAGGCACATAAAACAGTGGAAGCCATCTTTGAATAAATAAAA
                      ____________________________________________________________
consensus             GAGGCAAGACCACCAAAGAAGGCACATAAAACAGTGGAAGCCATCTTTGAATAAATAAAA
 
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JMSF041L16+           GTGCAGGCTCAAAGAAGTTCACCAAGGCAGTTGCTGCGGCAGGGAGAATGGTATCAAGAA
                      ____________________________________________________________
consensus             GTGCAGGCTCAAAGAAGTTCACCAAGGCAGTTGCTGCGGCAGGGAGAATGGTATCAAGAA
 
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JMSF041L16+           CTATTAAAACGGTGAAAGTGCAAAACATCCCAAATAGAGCACTTGGGAACTTAATGGCTG
JMSF001L01+                                        CCAAATAGAGCACTTGGGAACTTAATGGCTG
                      ____________________________________________________________
consensus             CTATTAAAACGGTGAAAGTGCAAAACATCCCAAATAGAGCACTTGGGAACTTAATGGCTG
 
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JMSF041L16+           CAGCCACAAATGCCTGCTTCAGGTACTTATCCATTGCCAGTATAAGCCCAAGTGAAACTA
JMSF001L01+           CAGCCACAAATGCCTGCTTCAGGTACTTATCCATTGCCAGTATAAGCCCAAGTGAAACTA
                      ____________________________________________________________
consensus             CAGCCACAAATGCCTGCTTCAGGTACTTATCCATTGCCAGTATAAGCCCAAGTGAAACTA
 
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JMSF041L16+           GCAAATGGAAAACGCCAATCACCTTGCTTGATAGGCTTGTGGAAGTGCTAGCACTACCGT
JMSF001L01+           GCAAATGGAAAACGCCAATCACCTTGCTTGATAGGCTTGTGGAAGTGCTAGCACTACCGT
                      ____________________________________________________________
consensus             GCAAATGGAAAACGCCAATCACCTTGCTTGATAGGCTTGTGGAAGTGCTAGCACTACCGT
 
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JMSF041L16+           CTGATCCCACTGAATGGGCAAGGAATTTGGGAGTGGAGTGAGATTTGTGAGTACCCAATT
JMSF001L01+           CTGATCCCACTGAATGGGCAAGGAATTTGGGAGTGGAGTGAGATTTGTGAGTACCCAATT
                      ____________________________________________________________
consensus             CTGATCCCACTGAATGGGCAAGGAATTTGGGAGTGGAGTGAGATTTGTGAGTACCCAATT
 
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JMSF041L16+           GCGAGAACTTGGGGTGTGGCCCAAGAAGTTTGATTTTTGCAGGGTTGGTGATTTGTAGGC
JMSF001L01+           GCGAGAACTTGGGGTGTGGCCCAAGAAGTTTGATTTTTGCAGGGTTGGTGATTTGTAGGC
                      ____________________________________________________________
consensus             GCGAGAACTTGGGGTGTGGCCCAAGAAGTTTGATTTTTGCAGGGTTGGTGATTTGTAGGC
 
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JMSF041L16+           CGCCATTGGAGGCAAGCATGGGAATTTTTCTGGAATTCCGTACAGAGATGAAAGGGGTGA
JMSF001L01+           CGCCATTGGAGGCAAGCATGGGAATTTTTCTGGAATTCCGTACAGAGATGAAAGGGGTGA
                      ____________________________________________________________
consensus             CGCCATTGGAGGCAAGCATGGGAATTTTTCTGGAATTCCGTACAGAGATGAAAGGGGTGA
 
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JMSF041L16+           TTCTTGATTGGTGATTGGGAAAGGAAAAAGACGATGATATGATTTGTGGAGCAGCAGAAG
JMSF001L01+           TTCTTGATTGGTGATTGGGAAAGGAAAAAGACGATGATATGATTTGTGGAGCAGCAGAAG
                      ____________________________________________________________
consensus             TTCTTGATTGGTGATTGGGAAAGGAAAAAGACGATGATATGATTTGTGGAGCAGCAGAAG
 
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JMSF041L16+           GTGTTGCCGCCATGGGAATGGGCGATAGGGGGGGAGTGGAGGTGGAGAAGC         
JMSF001L01+           GTGTTGCCGCCATGGGAATGGGCGATAGGGGGGGAGTGGAGGTGGAGAAGCGGATGCATC
                      ____________________________________________________________
consensus             GTGTTGCCGCCATGGGAATGGGCGATAGGGGGGGAGTGGAGGTGGAGAAGCGGATGCATC