Contig 007726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001B13Sequence228007726 (3)ref|XP_009772969.1|2e-12PREDICTED: DTW domain-containing protein 2 [Nicotiana sylvestris]752019200ref|XP_004232246.1|6e-121PREDICTED: DTW domain-containing protein 2 [Solanum lycopersicum]
JMSF015A13Sequence491007726 (3)ref|XP_009772969.1|1e-44PREDICTED: DTW domain-containing protein 2 [Nicotiana sylvestris]768007726 (3)ref|XP_004232246.1|1e-25PREDICTED: DTW domain-containing protein 2 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF015A13-                                                                    TA
                      ____________________________________________________________
consensus                                                                       TA
 
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rJMSF015A13-          ACAGAGACCTGAACCAAATGGTCAAGACTTAAGTTTGCCACCTGCACTGATTTATCAATT
                      ____________________________________________________________
consensus             ACAGAGACCTGAACCAAATGGTCAAGACTTAAGTTTGCCACCTGCACTGATTTATCAATT
 
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rJMSF015A13-          TTAAAGCTAGGCCCTACCACACAAAATCAACTATAATGTTACTTAAAGGTCCAATCTTCT
                      ____________________________________________________________
consensus             TTAAAGCTAGGCCCTACCACACAAAATCAACTATAATGTTACTTAAAGGTCCAATCTTCT
 
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rJMSF015A13-          TACTCTTCTTCACTTCCACTTCACCCTTTTTATCAAAAGCTTAAGCCATGATTCAAACAC
                      ____________________________________________________________
consensus             TACTCTTCTTCACTTCCACTTCACCCTTTTTATCAAAAGCTTAAGCCATGATTCAAACAC
 
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rJMSF015A13-          ATAGAGAGTAGAGATATCTCACAACTTTGACAAAGTCCCGCTAAACCTGGTCTGGTGGCC
                      ____________________________________________________________
consensus             ATAGAGAGTAGAGATATCTCACAACTTTGACAAAGTCCCGCTAAACCTGGTCTGGTGGCC
 
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rJMSF015A13-          CTGTAATGTGATTTAGCAACCTCTCTGATACATCCTCTGAATGTGGATACTTTGCAACTG
                      ____________________________________________________________
consensus             CTGTAATGTGATTTAGCAACCTCTCTGATACATCCTCTGAATGTGGATACTTTGCAACTG
 
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rJMSF015A13-          TATCTGAATTCAAGGCTATGTCTGTGAATTTCCTAAAAGCAAAGCAAAGCAAACCGGGCG
                      ____________________________________________________________
consensus             TATCTGAATTCAAGGCTATGTCTGTGAATTTCCTAAAAGCAAAGCAAAGCAAACCGGGCG
 
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rJMSF015A13-          GCAAGTTTGGCAAATATGTGCATTTAACTTGACAGGATTACAAGTCCAACCAACACCAAT
                      ____________________________________________________________
consensus             GCAAGTTTGGCAAATATGTGCATTTAACTTGACAGGATTACAAGTCCAACCAACACCAAT
 
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rJMSF015A13-          CAAACTCTGGTATCTTCATTCACATGAAGGCAATGAAACCAACTTGGTTCATTTCAATAA
                      ____________________________________________________________
consensus             CAAACTCTGGTATCTTCATTCACATGAAGGCAATGAAACCAACTTGGTTCATTTCAATAA
 
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rJMSF015A13-          ATGTGACTTGTGAACAAACAAAAGTTCTGGCTTGTTGGAATTAGTCCAGATTGAATGGCT
                      ____________________________________________________________
consensus             ATGTGACTTGTGAACAAACAAAAGTTCTGGCTTGTTGGAATTAGTCCAGATTGAATGGCT
 
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rJMSF015A13-          GATATGCTTGATAACTCTGAAAATCAGGAAAGAGAAAAACAGCTCTGCGGGGCACATTAG
JMSF015A13+                                   CAGGAAAGAGAAAAACAGCTCTGCGGGGCACATTAG
                      ____________________________________________________________
consensus             GATATGCTTGATAACTCTGAAAATCAGGAAAGAGAAAAACAGCTCTGCGGGGCACATTAG
 
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rJMSF015A13-          GGTTTGCAACTGCCTCATCATGAAGATTATCGAGGACCTTTGAATCACCATAACGAAGTC
JMSF015A13+           GGTTTGCAACTGCCTCATCATGAAGATTATCGAGGACCTTTGAATCACCATAACGAAGTC
                      ____________________________________________________________
consensus             GGTTTGCAACTGCCTCATCATGAAGATTATCGAGGACCTTTGAATCACCATAACGAAGTC
 
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rJMSF015A13-          TCCGTCCGGCAATGACCTCGCAATTTCCCAAGCACTTGGACAGAACAGGAACAGTGGCGA
JMSF015A13+           TCCGTCCGGCAATGACCTCGCAATTTCCCAAGCACTTGGACAGAACAGGAACAGTGGCGA
                      ____________________________________________________________
consensus             TCCGTCCGGCAATGACCTCGCAATTTCCCAAGCACTTGGACAGAACAGGAACAGTGGCGA
 
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rJMSF015A13-          GCTTGTGGCGGCGCTCGTGAGGGTGCTGGAGGACAACGACTCGGGT              
JMSF015A13+           GCTTGTGGCGGCGCTCGTGAGGGTGCTGGAGGACAACGACTCGGGTCAGGTTCGAAATCG
JMSF001B13+                       GCTCGTGAGGGTGCTGGAGGACAACGACTCGGGTCAGGTTCGAAATCG
                      ____________________________________________________________
consensus             GCTTGTGGCGGCGCTCGTGAGGGTGCTGGAGGACAACGACTCGGGTCAGGTTCGAAATCG
 
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JMSF015A13+           GGTCGGGTGGGATTGTAGCGCATAAGCAAACGTTTGCTGGCCTGTCGCATTTGGCGCATA
JMSF001B13+           GGTCGGGTGGGATTGTAGCGCATAAGCAAACGTTTGCTGGCCTGTCGCATTTGGCGCATA
                      ____________________________________________________________
consensus             GGTCGGGTGGGATTGTAGCGCATAAGCAAACGTTTGCTGGCCTGTCGCATTTGGCGCATA
 
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JMSF015A13+           TCCTTCGTCTTGTTTGGAAGTCGCCGGCGGCGTCAGGGATGTCTTTGTCAGCTGCGCAAT
JMSF001B13+           TCCTTCGTCTTGTTTGGAAGTCGCCGGCGGCGTCAGGGATGTCTTTGTCAGCTGCGCAAT
                      ____________________________________________________________
consensus             TCCTTCGTCTTGTTTGGAAGTCGCCGGCGGCGTCAGGGATGTCTTTGTCAGCTGCGCAAT
 
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JMSF015A13+           TTTCCGGCGCCATTCCAGTGTTTGAGAATGTTG                           
JMSF001B13+           TTTCCGGCGCCATTCCAGTGTTTGAGAATGTTGCCGCCGAGGGAGGGAAATGCTTCTCTC
                      ____________________________________________________________
consensus             TTTCCGGCGCCATTCCAGTGTTTGAGAATGTTGCCGCCGAGGGAGGGAAATGCTTCTCTC