Contig 007721:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS145F02Sequence624007721 (2)ref|XP_004252012.2|9e-57PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator
JMFS165B11Sequence588007721 (2)ref|XP_004252012.2|3e-44PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS145F02+ TGAAAGTGCAGATTTCACACTTTCAAACGCCGCTATTCTTGCAAAGATGTGAACTT
                      ____________________________________________________________
consensus TGAAAGTGCAGATTTCACACTTTCAAACGCCGCTATTCTTGCAAAGATGTGAACTT
 
. : . : . : . : . : . :
JMFS145F02+ GGCAGGGAATCTTATATCGGTTTCCTTGACGGGACACCTTCGGCACAATACCTTCGACGG
JMFS165B11+ TATATCGGTTTCCTTGACGGGACACCTTCGGCACAATACCTCNGACGG
                      ____________________________________________________________
consensus GGCAGGGAATCTTATATCGGTTTCCTTGACGGGACACCTTCGGCACAATACCTTCGACGG
 
. : . : . : . : . : . :
JMFS145F02+ TGACTAGTCTGGAATCAATGAGAGGGGCGAAGACTTGAGCGGCGGCGCGTTCGATATAGC
JMFS165B11+ TGACTAGTCTGGAATCAATGAGAGGGGCGAAGACTTGAGCGGCGGCGCGTTCGATATAGC
                      ____________________________________________________________
consensus TGACTAGTCTGGAATCAATGAGAGGGGCGAAGACTTGAGCGGCGGCGCGTTCGATATAGC
 
. : . : . : . : . : . :
JMFS145F02+ CGACCTGGGCGGAGCGAGTGTTGAGGACCTTGATAGCGTTCGGGTCATGGGTATTTAGCG
JMFS165B11+ CGACCTGGGCGGAGCGAGTGTTGAGGACCTTGATAGCGTTCGGGTCATGGGTATTTAGCG
                      ____________________________________________________________
consensus CGACCTGGGCGGAGCGAGTGTTGAGGACCTTGATAGCGTTCGGGTCATGGGTATTTAGCG
 
. : . : . : . : . : . :
JMFS145F02+ GGTCGCGGACCAGGCTGACCAGTTCCCGGCCGTTGATCGTTCCAGAGTAGTACTGGAGGC
JMFS165B11+ GGTCGCGGACCAGGCTGACCAGTTCCCGGCCGTTGATCGTTCCAGAGTAGTACTGGAGGC
                      ____________________________________________________________
consensus GGTCGCGGACCAGGCTGACCAGTTCCCGGCCGTTGATCGTTCCAGAGTAGTACTGGAGGC
 
. : . : . : . : . : . :
JMFS145F02+ CCACAATGTTGACGATCACGAAGCCCATCAGGAGCAACTCGCCGCCGACCTGCGACGAAG
JMFS165B11+ CCACAATGTTGACGATCACGAAGCCCATCAGGAGCAACTCGCCGCCGACCTGCGACGAAG
                      ____________________________________________________________
consensus CCACAATGTTGACGATCACGAAGCCCATCAGGAGCAACTCGCCGCCGACCTGCGACGAAG
 
. : . : . : . : . : . :
JMFS145F02+ AAGAAGGGGACGAAGAAAATGAGGACCCATCCAACTGAGACCCCTCCGCAACAACGTCGT
JMFS165B11+ AAGAAGGGGACGAAGAAAATGAGGACCCATCCAACTGAGACCCCTCCGCAACAACGTCGT
                      ____________________________________________________________
consensus AAGAAGGGGACGAAGAAAATGAGGACCCATCCAACTGAGACCCCTCCGCAACAACGTCGT
 
. : . : . : . : . : . :
JMFS145F02+ CTTCGCCGTCCCCGTTGAAAGGTATCAAAGGCCAGCGGTCCAACACCATGAAGAGCTCCA
JMFS165B11+ CTTCGCCGTCCCCGTTGAAAGGTATCAAAGGCCAGCGGTCCAACACCATGAAGAGCTCCA
                      ____________________________________________________________
consensus CTTCGCCGTCCCCGTTGAAAGGTATCAAAGGCCAGCGGTCCAACACCATGAAGAGCTCCA
 
. : . : . : . : . : . :
JMFS145F02+ CTGGGTCTTGCTCATCGGACATTTTCTTGTACCCCTGTCGGTTTTCTTGTCCCAAAAACA
JMFS165B11+ CTGGGTCTTGCTCATCGGACATTTTCTTGTACCCCTGTCGGTTTTCTTGTCCCAAAAACA
                      ____________________________________________________________
consensus CTGGGTCTTGCTCATCGGACATTTTCTTGTACCCCTGTCGGTTTTCTTGTCCCAAAAACA
 
. : . : . : . : . : . :
JMFS145F02+ GCAAAAAGAAAATCTGGGATTGCTTCTCCTTCTTCTTCCTCTTCCTCTGATGCTGACTAT
JMFS165B11+ GCAAAAAGAAAATCTGGGATTGCTTCTCCTTCTTCTTCCTCTTCCTCTGATGCTGACTAT
                      ____________________________________________________________
consensus GCAAAAAGAAAATCTGGGATTGCTTCTCCTTCTTCTTCCTCTTCCTCTGATGCTGACTAT
 
. : . : . : . : . : . :
JMFS145F02+ TTAAAACAGTGGCCGTTTCTTGAATCCT
JMFS165B11+ TTAAAACAGTGGCCGTTTCTTGAATCCTTCGGTGGGCGAAGACCAGCAAAAAGGGGCCAG
                      ____________________________________________________________
consensus TTAAAACAGTGGCCGTTTCTTGAATCCTTCGGTGGGCGAAGACCAGCAAAAAGGGGCCAG