| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS015E10 | Sequence | 539 | 007716 (7) | ref|XP_006353594.1| | 1e-51 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS018E06 | Sequence | 600 | 007716 (7) | ref|XP_006353594.1| | 5e-65 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS064G03 | Sequence | 589 | 007716 (7) | ref|XP_006353594.1| | 9e-62 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS079G04 | Sequence | 629 | 007716 (7) | ref|XP_006353594.1| | 4e-70 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS108F01 | Sequence | 627 | 007716 (7) | ref|XP_006353594.1| | 4e-70 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS159H11 | Sequence | 406 | 007716 (7) | ref|XP_009776538.1| | 5e-13 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMSF006N14 | Sequence | 330 | 007716 (7) | ref|XP_009631279.1| | 5e-08 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
This contig is upended
. : . : . : . : . : . :
JMFS108F01+ ACCGACAACAAAATCTGAAAATGA
JMFS079G04+ TGACCGACAACAAAATCTGANAATGA
____________________________________________________________
consensus TGACCGACAACAAAATCTGAAAATGA
. : . : . : . : . : . :
JMFS108F01+ TTCTGTGGCATGACCAGCAATATATATGCATGNAAGCATGGCTTTAAGGTTGTTGATATC
JMFS079G04+ TTCTGTTGCATGACCAGCAATATATATTGCATGAAGCATGGCTTTAAGGTTGTTGATATC
JMFS064G03+ AAGCATGGCTTTAAGGTTGTTGATATC
JMFS018E06+ AAGCATGGCTTTAAGGTTGTTGATATC
____________________________________________________________
consensus TTCTGTTGCATGACCAGCAATATATATTGCTTGAAGCATGGCTTTAAGGTTGTTGATATC
. : . : . : . : . : . :
JMFS108F01+ ATCATGCAGTTTTGATAAGAAAGCTGCAAGATCACTTCCATCAAGTAAATCTACTGCAGT
JMFS079G04+ ATCATGCAATTTTGATAAGAAAGCTGCAAGATCACTTCCATCAAGTAAATCTACTGCAGT
JMFS064G03+ ATCATGCAATTTTGATAAGAAAGCTGCAAGATCACTTCCATCAAGTAAATCTACTGCAGT
JMFS015E10+ TGCAATTTTGATAAGAAAGCTGCAAGATCACTTCCATCAAGTAAATCTACTGCAGT
JMFS018E06+ ATCATGCAATTTTGATAAGAAAGCTGCAAGATCACTTCCATCAAGTAAATCTACTGCAGT
____________________________________________________________
consensus ATCATGCAATTTTGATAAGAAAGCTGCAAGATCACTTCCATCAAGTAAATCTACTGCAGT
. : . : . : . : . : . :
JMFS108F01+ TAACTTGTGTTTCTCATGAACAGCATCCAATGCACTCGTATATAAATCATCCCGAGATTG
JMFS079G04+ TAACTTGTGTTTCTCATGAACAGCATCCAATGCACTCGTATATAAATCATCCCGAGATTG
JMFS064G03+ TAACTTGTGTTTCTCATGAACAGCATCCAATGCACTCGTATATAAATCATCCCGAGATTG
JMFS015E10+ TAACTTGTGTTTCTCATGAACAGCATCCAATGCACTCGTATATAAATCATCCCGAGATTG
JMFS018E06+ TAACTTGTGTTTCTCATGAACAGCATCCAATGCACTCGTATATAAATCATCCCGAGATTG
____________________________________________________________
consensus TAACTTGTGTTTCTCATGAACAGCATCCAATGCACTCGTATATAAATCATCCCGAGATTG
. : . : . : . : . : . :
JMFS108F01+ TGCTTTGTATATCAAATCATACATCATATCAGTCACTTTTGACATTGCAGACACAACAAT
JMFS079G04+ CGCTTTGTATATCAAATCATACATCATATCAGTCACTTTTGACATTGCAGACACAACAAT
JMFS064G03+ CGCTTTGTATATCAAATCATACATCATATCAGTCACTTTTGACATTGCAGACACAACAAT
JMFS015E10+ CGCTTTGTATATCAAATCATACATCATATCAGTCACTTTTGACATTGCAGACACAACAAT
JMFS018E06+ CGCTTTGTATATCAAATCATACATCATATCAGTCACTTTTGACATTGCAGACACAACAAT
____________________________________________________________
consensus CGCTTTGTATATCAAATCATACATCATATCAGTCACTTTTGACATTGCAGACACAACAAT
. : . : . : . : . : . :
JMFS108F01+ CAATTTTCTCTCTGATGTATCATTGCTTATTACATCTGCAACATTCTGTATCCTTTCAGA
JMFS079G04+ CAATTTTCTCTCTGATGTATCCTTGCTTATTACATCTGCAACATTCTGTATCCTTTCAGA
JMFS064G03+ CAATTTTCTCTCTGATGTATCCTTGCTTATTACATCTGCAACATTCTGTATCCTTTCAGA
JMFS015E10+ CAATTTTCTCTCTGATGTATCCTTGCTTATTACATCTGCAACATTCTGTATCCTTTCAGA
JMFS018E06+ CAATTTTCTCTCTGATGTATCCTTGCTTATTACATCTGCAACATTCTGTATCCTTTCAGA
JMSF006N14+ AGA
JMFS159H11+ ATGTATCATTGCTTATTACATCTGCAACATTCTGTATCCTTTCAGA
____________________________________________________________
consensus CAATTTTCTCTCTGATGTATCCTTGCTTATTACATCTGCAACATTCTGTATCCTTTCAGA
. : . : . : . : . : . :
JMFS108F01+ GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAACTATCACCCTTGGGAAGCTG
JMFS079G04+ GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAATTATCACCCTTGGGAAGCTG
JMFS064G03+ GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAATTATCACCCTTGGGAAGCTG
JMFS015E10+ GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAATTATCACCCTTGGGAAGCTG
JMFS018E06+ GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAATTATCACCCTTGGGAAGCTG
JMSF006N14+ GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAACTATCACCCTTGGGAAGCTG
JMFS159H11+ GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAACTATCACCCTTGGGAAGCTG
____________________________________________________________
consensus GCTTCCCACACAAGTACCACCAAATTTATGCACACTCCAATTATCACCCTTGGGAAGCTG
. : . : . : . : . : . :
JMFS108F01+ AGTTTTCTCTGCACTTGCAATTGCTACATGCGAATTTGGCATGTCACTTGTGCTCCATTG
JMFS079G04+ AGTTTTCTCTGTACTTGCAATCGCTACATGTGAATTTGGCATGTCACTTGTGCTCCATTG
JMFS064G03+ AGTTTTCTCTGTACTTGCAATCGCTACATGTGAATTTGGCATGTCACTTGTGCTCCATTG
JMFS015E10+ AGTTTTCTCTGTACTTGCAATCGCTACATGTGAATTTGGCATGTCACTTGTGCTCCATTG
JMFS018E06+ AGTTTTCTCTGTACTTGCAATCGCTACATGTGAATTTGGCATGTCACTTGTGCTCCATTG
JMSF006N14+ AGTTTTCTCTGCACTTGCAATTGCTACATGCGAATTTGGCATGTCACTTGTGCTCCATTG
JMFS159H11+ AGTTTTCTCTGCACTTGCAATTGCTACATGCGAATTTGGCATGTCACTTGTGCTCCATTG
____________________________________________________________
consensus AGTTTTCTCTGTACTTGCAATCGCTACATGTGAATTTGGCATGTCACTTGTGCTCCATTG
. : . : . : . : . : . :
JMFS108F01+ TGAACTACAATCAATTTTGAGAGAAGAAGAGCGGTGGAAGGGAGAACGAAGAGATA-TAT
JMFS079G04+ TGAACTACAATCAATTTTGAGAGGAGAAGAGCGGTGGAAGGGAGAACGCAGAGATA-TAT
JMFS064G03+ TGAACTACAATCAATTTTGAGAGGAGAAGAGCGGTGGAAGGGAGAACGCAGAGATA-TAT
JMFS015E10+ TGAACTACAATCAATTTTGAGAGGAGAAGAGCGGTGGAAGGGAGAACGCAGAGATA-TAT
JMFS018E06+ TGAACTACAATCAATTTTGAGAGGAGAAGAGCGGTGGAAGGGAGAACGCAGAGATA-TAT
JMSF006N14+ TGAACTACAATCAATTTTGAGAGAAGAAGAGCGGTGGAAGGGAGAACGAAGAGATA-TAT
JMFS159H11+ TGAACTCCAATCAATTTTGAGAGAAGAAGAGCGGTGGAAGGAAGAACGAAGAGATACCAC
____________________________________________________________
consensus TGAACTACAATCAATTTTGAGAGGAGAAGAGCGGTGGAAGGGAGAACGCAGAGATA-TAT
. : . : . : . : . : . :
JMFS108F01+ TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
JMFS079G04+ TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
JMFS064G03+ TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
JMFS015E10+ TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
JMFS018E06+ TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
JMSF006N14+ TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
JMFS159H11+ TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
____________________________________________________________
consensus TGGTGAAGGAAGATGATGCCTTCTTAGAATTGGCATTTGAGGTAGTTGCCGGTGAGAAAG
. : . : . : . : . : . :
JMFS108F01+ CGTAGGCCGTCAAGCTGCCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
JMFS079G04+ CGTAGGCGGTCAGGCTACCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
JMFS064G03+ CGTAGGCGGTCAGGCTACCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
JMFS015E10+ CGTAGGCGGTCAGGCTACCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
JMFS018E06+ CGTAGGCGGTCAGGCTACCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
JMSF006N14+ CGTAGGCCGTCAAGCTGCCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
JMFS159H11+ CGTAGGCCGTCAAGCTGCCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
____________________________________________________________
consensus CGTAGGCGGTCAGGCTACCGGAGCGCGTCGGAGCGATGGGAGATAGTGCCATTTTCCGAT
. : . : . : . : . : . :
JMFS108F01+ TT
JMFS079G04+ TTGT
JMFS064G03+ TTGT
JMFS015E10+ TTGT
JMFS018E06+ TTGT
JMSF006N14+ TTCAGGTGCTGAGGCTGCTACGATG
JMFS159H11+ TTCAGGTGCTGAGGCTGCTACGATGTCCACAACAAATGGGCGGCTGGGCGGGGGGTTTTA
____________________________________________________________
consensus TTGTGGTGCTGAGGCTGCTACGATGTCCACAACAAATGGGCGGCTGGGCGGGGGGTTTTA