Contig 007698:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS138B02Sequence561007698 (3)ref|XP_007010997.1|4e-26Glycoside hydrolase family 2 protein isoform 3 [Theobroma cacao] ref|XP_00701099
JMSF025L18Sequence669003833 (8)ref|XP_009775632.1|3e-68PREDICTED: beta-galactosidase-like [Nicotiana sylvestris] ref|XP_009775633.1| PR739007698 (3)ref|XP_009777202.1|1e-111PREDICTED: beta-galactosidase-like [Nicotiana sylvestris]
JMSF041M12Sequence786003833 (8)ref|XP_009775632.1|4e-81PREDICTED: beta-galactosidase-like [Nicotiana sylvestris] ref|XP_009775633.1| PR630007698 (3)ref|XP_002266400.1|4e-95PREDICTED: beta-galactosidase [Vitis vinifera] ref|XP_010645604.1| PREDICTED: be

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF025L18+ TGAAGTGAATACTCTTTCAGCTTCAGGGGCATCATCTAGTCTTCTC
                      ____________________________________________________________
consensus TGAAGTGAATACTCTTTCAGCTTCAGGGGCATCATCTAGTCTTCTC
 
. : . : . : . : . : . :
rJMSF025L18+ TTTAAAGTTCATATGTTATACTCGATATATGGTTCTGGAGATGTTATTCTGGAATGCAAC
                      ____________________________________________________________
consensus TTTAAAGTTCATATGTTATACTCGATATATGGTTCTGGAGATGTTATTCTGGAATGCAAC
 
. : . : . : . : . : . :
rJMSF025L18+ GTGGAGCCATGTTCTGATCTTCCACCTCTGCCACGTGTTGGCGTTGAATTTCAACTGGAA
rJMSF041M12+ CCTCTGCCACGTGTTGGCGTTGAATTTCAACTGGAA
                      ____________________________________________________________
consensus GTGGAGCCATGTTCTGATCTTCCACCTCTGCCACGTGTTGGCGTTGAATTTCAACTGGAA
 
. : . : . : . : . : . :
rJMSF025L18+ AAATCCTTGGACCAGATTAGCTGGTATGGAAGAGGACCGTTTGAATGTTACCCAGACCGT
rJMSF041M12+ AAATCCTTGGACCAGATTAGCTGGTATGGAAGAGGACCGTTTGAATGTTACCCAGACCGT
                      ____________________________________________________________
consensus AAATCCTTGGACCAGATTAGCTGGTATGGAAGAGGACCGTTTGAATGTTACCCAGACCGT
 
. : . : . : . : . : . :
rJMSF025L18+ AAAGCTGCTGCCCATGTAGGCATCTATAAACATAATGTTGGCGATATGCACGTGCCTTAT
rJMSF041M12+ AAAGCTGCTGCCCATGTAGGCATCTATAAACATAATGTTGGCGATATGCACGTGCCTTAT
                      ____________________________________________________________
consensus AAAGCTGCTGCCCATGTAGGCATCTATAAACATAATGTTGGCGATATGCACGTGCCTTAT
 
. : . : . : . : . : . :
rJMSF025L18+ ATTGTTCCTGGGGAATGCTCGGGTAGGGCAGATGTTAGATGGGTGACATTTCAAAGCAAG
rJMSF041M12+ ATTGTTCCTGGGGAATGCTCGGGTAGGGCAGATGTTAGATGGGTGACATTTCAAAGCAAG
                      ____________________________________________________________
consensus ATTGTTCCTGGGGAATGCTCGGGTAGGGCAGATGTTAGATGGGTGACATTTCAAAGCAAG
 
. : . : . : . : . : . :
rJMSF025L18+ GAGGGCACTGGCATCTACGCTTCTATGTATGGGGGCTCCCCACCAATGCAAATGAATGCT
rJMSF041M12+ GAGGGCACTGGCATCTACGCTTCTATGTATGGGGGCTCCCCACCAATGCAAATGAATGCT
                      ____________________________________________________________
consensus GAGGGCACTGGCATCTACGCTTCTATGTATGGGGGCTCCCCACCAATGCAAATGAATGCT
 
. : . : . : . : . : . :
rJMSF025L18+ AGCTACTACACAACGGCTGAGCTTGACCGGGCTACACACCATGAAGATCTTGTAAAAAGT
rJMSF041M12+ AGCTACTACACAACGGCTGAGCTTGACCGGGCTACACACCATGAAGATCTTGTAAAAAGT
JMFS138B02+ CATGAAGATCTTGTAAAAAGT
                      ____________________________________________________________
consensus AGCTACTACACAACGGCTGAGCTTGACCGGGCTACACACCATGAAGATCTTGTAAAAAGT
 
. : . : . : . : . : . :
rJMSF025L18+ GATAGCATTGAGGTGCATCTCGACCACAAGCACATGGGTTTGGGAGGCGACGATAGCTGG
rJMSF041M12+ GATAGCATTGAGGTGCATCTCGACCACAAGCACATGGGTTTGGGAGGCGACGATAGCTGG
JMFS138B02+ GATAGCATTGAGGTGCATCTCGACCACAAGCACATGGGTTTGGGAGGCGACGATAGCTGG
                      ____________________________________________________________
consensus GATAGCATTGAGGTGCATCTCGACCACAAGCACATGGGTTTGGGAGGCGACGATAGCTGG
 
. : . : . : . : . : . :
rJMSF025L18+ TCGCCTTGCGTTCACGAGCAGTACCTTCTTCCTGCTGCTCCCTACTCTTTCTCCATCAGG
rJMSF041M12+ TCGCCTTGCGTTCACGAGCAGTACCTTCTTCCTGCTGCTCCCTACTCTTTCTCCATCAGG
JMFS138B02+ TCGCCTTGCGTTCACGAGCAGTACCTTCTTCCTGCTGCTCCCTACTCTTTCTCCATCAGG
                      ____________________________________________________________
consensus TCGCCTTGCGTTCACGAGCAGTACCTTCTTCCTGCTGCTCCCTACTCTTTCTCCATCAGG
 
. : . : . : . : . : . :
rJMSF025L18+ TTTCACCCCTTAACTGCAGCAACTTCTGGCCCTGATGTCTACAAATCACAACTTTGAGGA
rJMSF041M12+ TTTCACCCCTTAACTGCAGCAACTTCTGGCCCTGATGTCTACAAATCACAACTTTGAGGA
JMFS138B02+ TTTCACCCCTTAACTGCAGCAACTTCTGGCCCTGATGTCTACAAATCACAACTTTGAGGA
                      ____________________________________________________________
consensus TTTCACCCCTTAACTGCAGCAACTTCTGGCCCTGATGTCTACAAATCACAACTTTGAGGA
 
. : . : . : . : . : . :
rJMSF025L18+ CCATTCACTCTCACTGCATGGGTGGACTTGTTTAGCCTAGACTCTGAACTTGCATGAGAA
rJMSF041M12+ CCATTCACTCTCACTGCATGGGTGGACTTGTTTAGCCTAGACTCTGAACTTGCATGAGAA
JMFS138B02+ CCATTCACTCTCACTGCATGGGTGGACTTGTTTAGCCTAGACTCTGAACTTGCATGAGAA
                      ____________________________________________________________
consensus CCATTCACTCTCACTGCATGGGTGGACTTGTTTAGCCTAGACTCTGAACTTGCATGAGAA
 
. : . : . : . : . : . :
rJMSF025L18+ ATGTAGAAA-TAAAACTGAATAATAAAATGCCGG
rJMSF041M12+ ATGTAGAAATTAAAACTGAATAATAAAATGCCGGGTACCTTTTGATT
JMFS138B02+ ATGTAGAAATTAAAACTGAATAATAAAATGCCGGGTACCTTTTGATTTGAATAATGGAAT
                      ____________________________________________________________
consensus ATGTAGAAATTAAAACTGAATAATAAAATGCCGGGTACCTTTTGATTTGAATAATGGAAT
 
. : . : . : . : . : . :
JMFS138B02+ CTGTTGGCTAAAGATTTAGTTATGTTAACAACAATTGTGATTTCCCTAGCATGGATAATC
                      ____________________________________________________________
consensus CTGTTGGCTAAAGATTTAGTTATGTTAACAACAATTGTGATTTCCCTAGCATGGATAATC
 
. : . : . : . : . : . :
JMFS138B02+ AGTGCATGCTACTTACTCATTTGTTACAGTGCTCTTGTTAGTTATATGTTATATGCATAG
                      ____________________________________________________________
consensus AGTGCATGCTACTTACTCATTTGTTACAGTGCTCTTGTTAGTTATATGTTATATGCATAG
 
. : . : . : . : . : . :
JMFS138B02+ TGAAAAATTGATCAGTTCAAGGGTTTGATCCTGAGTGTATCTAGTAAATAGTAATATCGC
                      ____________________________________________________________
consensus TGAAAAATTGATCAGTTCAAGGGTTTGATCCTGAGTGTATCTAGTAAATAGTAATATCGC
 
. : . : . : . : . : . :
JMFS138B02+ GTAACACTTTAGAGAGAGTTGTTTTTCGAAAGGGTTAAAAAAAAAAAAAAAAAACTCGAG
                      ____________________________________________________________
consensus GTAACACTTTAGAGAGAGTTGTTTTTCGAAAGGGTTAAAAAAAAAAAAAAAAAACTCGAG