Contig 007696:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS122E04+                                                    GCTTATCATCTTCAGAGTC
                      ____________________________________________________________
consensus                                                      GCTTATCATCTTCAGAGTC
 
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JMFS122E04+           TGATTCGCCATTTGGATCTGAAACAGATGGCTTCTCCTCCATAACAACCGTGTTTGATCT
JMFS116G02+           TGATTCGCCATTTGGATCTGAAACAGATGGCTTCTCCTCCATAACAACCGTGTTTGATCT
JMFS136F02+                                                  CATAACAACCGTGTTTGATCT
                      ____________________________________________________________
consensus             TGATTCGCCATTTGGATCTGAAACAGATGGCTTCTCCTCCATAACAACCGTGTTTGATCT
 
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JMFS122E04+           GCATTGGTTTAAATTAGTTGACCGATTAGCTGGAGAAGCTAACGGTTTTGAGTTTTTAAC
JMFS116G02+           GCATTGGTTTAAATTAGTTGACCGATTAGCTGGAGAAGCTAACGGTTTTGAGTTTTTAAC
JMFS136F02+           GCATTGGTTTAAATTAGTTGACCGATTAGCTGGAGAAGCTAACGGTTTTGAGTTTTTAAC
                      ____________________________________________________________
consensus             GCATTGGTTTAAATTAGTTGACCGATTAGCTGGAGAAGCTAACGGTTTTGAGTTTTTAAC
 
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JMFS122E04+           AACAGTATTTGCTGGTGATGTCTTGCTTGTTGGAGGTGACAGTCTTGGGCTAACCAATGG
JMFS116G02+           AACAGTATTTGCTGGTGATGTCTTGCTTGTTGGAGGTGACAGTCTTGGGCTAACCAATGG
JMFS136F02+           AACAGTATTTGCTGGTGATGTCTTGCTTGTTGGAGGTGACAGTCTTGGGCTAACCAATGG
                      ____________________________________________________________
consensus             AACAGTATTTGCTGGTGATGTCTTGCTTGTTGGAGGTGACAGTCTTGGGCTAACCAATGG
 
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JMFS122E04+           TGATTTCACTGGTGATGCCTTGGAGGAGGGGACTGTTTTGTTGTCCTTTTGAACAGTAGA
JMFS116G02+           TGATTTCACTGGTGATGCCTTGGAGGAGGGGACTGTTTTGTTGTCCTTTTGAACAGTAGA
JMFS136F02+           TGATTTCACTGGTGATGCCTTGGAGGAGGGGACTGTTTTGTTGTCCTTTTGAACAGTAGA
                      ____________________________________________________________
consensus             TGATTTCACTGGTGATGCCTTGGAGGAGGGGACTGTTTTGTTGTCCTTTTGAACAGTAGA
 
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JMFS122E04+           ATTTTGACCATTAAGAGAATTGGTATTGGAGATCTGCCTCCCTACCTGTCCATCATGCTT
JMFS116G02+           ATTTTGACCATTAAGAGAATTGGTATTGGAGATCTGCCTCCCTACCTGTCCATCATGCTT
JMSF010J12+                                                    CTACCTGTCCATCATGCTT
JMFS136F02+           ATTTTGACCATTAAGAGAATTGGTATTGGAGATCTGCCTCCCTACCTGTCCATCATGCTT
                      ____________________________________________________________
consensus             ATTTTGACCATTAAGAGAATTGGTATTGGAGATCTGCCTCCCTACCTGTCCATCATGCTT
 
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JMFS122E04+           TTGAGACAATGATGTATTTGGCTCAGAGTTTGATACATTCGACTTTGATGCCATGTTACC
JMFS116G02+           TTGAGACAATGATGTATTTGGCTCAGAGTTTGATACATTCGACTTTGATGCCATGTTACC
JMSF010J12+           TTGAGACAATGATGTATTTGGCTCAGAGTTTGATACATTCGACTTTGATGCCATGTTACC
JMFS136F02+           TTGAGACAATGATGTATTTGGCTCAGAGTTTGATACATTCGACTTTGATGCCATGTTACC
                      ____________________________________________________________
consensus             TTGAGACAATGATGTATTTGGCTCAGAGTTTGATACATTCGACTTTGATGCCATGTTACC
 
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JMFS122E04+           ACGCTTGAAACGTAAGGGCATCTCATCATCATCATCCATGTCAGTGAAATTAGGTTGCAC
JMFS116G02+           ACGCTTGAAACGTAAGGGCATCTCATCATCATCATCCATGTCAGTGAAATTAGGTTGCAC
JMSF010J12+           ACGCTTGAAACGTAAGGGCATCTCATCATCATCATCCATGTCAGTGAAATTAGGTTGCAC
JMFS136F02+           ACGCTTGAAACGTAAGGGCATCTCATCATCATCATCCATGTCAGTGAAATTAGGTTGCAC
                      ____________________________________________________________
consensus             ACGCTTGAAACGTAAGGGCATCTCATCATCATCATCCATGTCAGTGAAATTAGGTTGCAC
 
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JMFS122E04+           AGAAGCTGTCATAAACTTCACCAAATTCAATTAATAGTTCAGATTTCTTCAAATTGAAGA
JMFS116G02+           AGAAGCTGTCATAAACTTCACCAAATTCAATTAATAGTTCAGATTTCTTCAAATTGAAGA
JMSF010J12+           AGAAGCTGTCATAAACTTCACCAAATTCAATTAATAGTTCAGATTTCTTCAAATTGAAGA
JMFS136F02+           AGAAGCTGTCATAAACTTCACCAAATTCAATTAATAGTTCAGATTTCTTCAAATTGAAGA
                      ____________________________________________________________
consensus             AGAAGCTGTCATAAACTTCACCAAATTCAATTAATAGTTCAGATTTCTTCAAATTGAAGA
 
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JMFS122E04+           GCCGAATATAGGAATTAGCCGATCGCCGCCGTCGTCGGAAGTTGTAAGAGGGAGGCGATT
JMFS116G02+           GCCGAATATAGGAATTAGCCGATCGCCGCCGTCGTCGGAAGTTGTAAGAGGGAGGCGATT
JMSF010J12+           GCCGAATATAGGAATTAGCCGATCGCCGCCGTCGTCGGAAGTTGTAAGAGGGAGGCGATT
JMFS136F02+           GCCGAATATAGGAATTAGCCGATCGCCGCCGTCGTCGGAAGTTGTAAGAGGGAGGCGATT
                      ____________________________________________________________
consensus             GCCGAATATAGGAATTAGCCGATCGCCGCCGTCGTCGGAAGTTGTAAGAGGGAGGCGATT
 
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JMFS122E04+           GAGCTGGGACGG                                                
JMFS116G02+           GAGCTGGGACGGGAGATAGGCGTTTT                                  
JMSF010J12+           GAGCTGGGACGGGAGATAGGCGTTTTTTGGAGTTAGAT                      
JMFS136F02+           GAGCTGGGACGGGAGATAGGCGTTTTTTGGAGTTAGATGAGATGAGGTGAGAGGGTCGGA
                      ____________________________________________________________
consensus             GAGCTGGGACGGGAGATAGGCGTTTTTTGGAGTTAGATGAGATGAGGTGAGAGGGTCGGA
 
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JMFS136F02+           GCAATTTTATTCCCTCACAAACGAAACAGATTTTCTTTTGGATTCGGACTCGGGTTCAAA
                      ____________________________________________________________
consensus             GCAATTTTATTCCCTCACAAACGAAACAGATTTTCTTTTGGATTCGGACTCGGGTTCAAA