Contig 007693:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010M08Sequence393000707 (26)gb|KJB80760.1|9e-82hypothetical protein B456_013G114400 [Gossypium raimondii]137007693 (12)
JMFF023G08Sequence537000707 (26)gb|KDO54954.1|3e-96hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]166007693 (12)
JMFF026C09Sequence462007693 (12)gb|ABR25991.1|4e-17methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativ
JMFF037I16Sequence511000707 (26)gb|KDO54954.1|5e-91hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]372007693 (12)gb|ABR25991.1|2e-14methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativ
JMFF038I10Sequence425000707 (26)tpg|DAA47597.1|6e-61TPA: putative methionine synthase family protein [Zea mays]172007693 (12)
JMFN007O01Sequence566007693 (12)gb|AAF26735.1|3e-65methionine synthase [Coffea arabica]
JMFS134F04Sequence539007693 (12)gb|AAF26735.1|1e-51methionine synthase [Coffea arabica]
JMSF019E06Sequence601000707 (26)tpg|DAA47596.1|2e-111TPA: putative methionine synthase family protein [Zea mays]681007693 (12)gb|AAF26735.1|6e-81methionine synthase [Coffea arabica]
JMSF031K06Sequence655000707 (26)gb|KJB80760.1|9e-121hypothetical protein B456_013G114400 [Gossypium raimondii]490007693 (12)emb|CAJ43618.1|4e-25methionine synthase [Plantago major]
JMSF031P13Sequence651000707 (26)gb|KJB80760.1|7e-120hypothetical protein B456_013G114400 [Gossypium raimondii]657007693 (12)gb|AAF26735.1|2e-66methionine synthase [Coffea arabica]
JMSF032M06Sequence657000707 (26)gb|KJB80760.1|2e-121hypothetical protein B456_013G114400 [Gossypium raimondii]595007693 (12)gb|AAF26735.1|6e-58methionine synthase [Coffea arabica]
JMSF047P22Sequence714000707 (26)gb|KJB80760.1|9e-135hypothetical protein B456_013G114400 [Gossypium raimondii]636007693 (12)gb|AAF26735.1|8e-57methionine synthase [Coffea arabica]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019E06+ TTGATGAAGCTGCTTTGAGAGAAGGTTTGCCTCTT
                      ____________________________________________________________
consensus TTGATGAAGCTGCTTTGAGAGAAGGTTTGCCTCTT
 
. : . : . : . : . : . :
rJMSF019E06+ AGGAAGGCTGAGCATGCATTCTATTTGAACTGGGCTGTTCACTCATTCAGAATCACTAAC
rJMSF047P22+ CAGAATCACTAAC
rJMSF032M06+ TCAGAATCACTAAC
rJMSF031P13+ TTCAGAATCACTAAC
                      ____________________________________________________________
consensus AGGAAGGCTGAGCATGCATTCTATTTGAACTGGGCTGTTCACTCATTCAGAATCACTAAC
 
. : . : . : . : . : . :
rJMSF019E06+ TGTGGCATCCAGGATACCACCCAGATTCACNCTCACATGTGNTACTCAAACTTCAATGAT
rJMSF047P22+ TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAT
rJMSF032M06+ TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAT
rJMSF031P13+ TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAG
                      ____________________________________________________________
consensus TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAT
 
. : . : . : . : . : . :
rJMSF019E06+ ATCATCCNCTCCATCATTGACATGGANGCCGATGTTATCACAATTGAGAACTCCCGTTTT
rJMSF047P22+ ATCATCCNCTCCATCATTGACATGGATGCCGATGTTATCNCAATTGAGAACTCCCGTTNT
rJMSF032M06+ ATCATCCNCTCCATCATTGACATGGANGCCGATGTTATCNCAATTGAGAACTCCCGTTTT
rJMSF031K06+ GAACTCCCGTTTT
rJMSF031P13+ ATCATNCACTCCATCATTGACATGGANGCCGATGTTATCNCAATTGAGAACTCCCGTTTT
JMFN007O01- TCCACTCCATCATTGACATGGATGCCGATGTTATCACAATTGAGAACTCCCGTTCT
                      ____________________________________________________________
consensus ATCATCCACTCCATCATTGACATGGATGCCGATGTTATCACAATTGAGAACTCCCGTTTT
 
. : . : . : . : . : . :
rJMSF019E06+ GATGAGAAGNTTNTTTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF047P22+ GATGAGAAGNTTNTNTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF032M06+ GATGNGAAGNTTNTNTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF031K06+ GNTGNGAAGNTTNTTTCAGTTTTCCGNGAGGGNGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF031P13+ GATGNGAAGNTTNTNTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
JMFN007O01- GATGAGAAGCTTCTCTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
JMFS134F04+ GATGAGAAGCTTCTCTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
                      ____________________________________________________________
consensus GATGAGAAGCTTCTCTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
 
. : . : . : . : . : . :
rJMSF019E06+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGNTTGCNGATAGAATC
rJMSF047P22+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGATTGCAGATAGAATC
rJMSF032M06+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGATTGCNGATAGAATC
rJMSF031K06+ GGNGTTTATGACATNCNCTTTCCCNGAATACCGTNCCCTGAAGNGNTTGCNGATAGAATC
rJMSF031P13+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGATTGCAGATAGAATC
rJMFF037I16+ GAAGAGATTGCAGATAGNATN
JMFN007O01- GGTGTCTATGACATCCACTCTCCCAGAATACCGTCCACTGAAGAGATTGCAGATAGAATC
rJMFF026C09+ TCCCAGAATNCCGTCCANTGAAGAGATTGCAGATNGAATC
JMFS134F04+ GGTGTCTATGACATCCACTCTCCCAGAATACCGTCCACTGAAGAGATTGCAGATAGAATC
                      ____________________________________________________________
consensus GGTGTCTATGACATCCACTCTCCCAGAATACCGTCCACTGAAGAGATTGCAGATAGAATC
 
. : . : . : . : . : . :
rJMSF019E06+ AACAAGATGCTTGCAGTTNTTGACNCCAACATNTTGTGGGTGAACCCCGACTGTGGTTTG
rJMSF047P22+ AACNAGATGCTTGCAGTTNTTGACACCAACATNTTGNGGGTGAACCCCGNCTGTGGTNTG
rJMSF032M06+ AACNAGATGCTTGCAGTTNTTGACNCCAACATNTTGTGGGTGAACCCCGNCTGTGGTTTG
rJMSF031K06+ AACNAGATGNTTGCAGTTNTTGNCNCCAACATTTTGNGGGNGAACCCCGNCTGTGGTTTG
rJMSF031P13+ AACAAGATGCTTGCAGTTNTTGACNCCAACATNTTGNGGGTGAACCCCGNCTGTGGTNTG
rJMFF037I16+ AACNAGATNCTTGCAGTTTTTGACNCCAACATTTTGTGGGNGAACCCCGGCTGNGGTTTG
JMFN007O01- AACAAGATGCTTGCAGTTCTTGACACCAACATCTTGTGGGTGAACCCCGACTGTGGTCTG
rJMFF026C09+ AACAAGANGCTTGCAGTTTTTNATNCCAACATTTTGTGGGTGAACCCCGNNTGNGGTTTG
JMFS134F04+ AACAAGATGCTTGCAGTTCTTGACACCAACATCTTGTGGGTGAACCCCGACTGTGGTCTG
                      ____________________________________________________________
consensus AACAAGATGCTTGCAGTTCTTGACACCAACATTTTGTGGGTGAACCCCGACTGTGGTTTG
 
. : . : . : . : . : . :
rJMSF019E06+ AAGACTNGCAAGTACNCCGAGGNGAAGCCAGCCCTNGAAAACATGGTTTTTGCTGCCAAG
rJMSF047P22+ AAGACTNGCAAGTACNCCGAGGNGAAGCCAGCCCTNGAAAACATGGTTTNTGNTGCCAAG
rJMSF032M06+ AAGACTNGCAAGTACNCCGAGGNGAAGCCAGCCCTNGAAAACNTGGTTTNTGNTGCCAAG
rJMSF031K06+ AAGNCTNGCAAGTACNCCGNGGNGAAGCCNGCCCTNGAAAACNTGGNTTTTGNTGCCNAG
rJMSF031P13+ AAGNCTNGCAAGTACNCCGAGGNGAAGCCNGCCCTNGAAAACATGGTTTTTGNTGCCAAG
rJMFF037I16+ AAGACTNGCAAGTNCNCCGAGGTGAAGCCAGCCCTTGNAAACATGGTTTTTGCTGCCAAG
JMFN007O01- AAGACTCGCAAGTACACCGAGGTGAAGCCAGCCCTCGAAAACATGGTTTCTGCTGCCAAG
rJMFF026C09+ AAGACTCGCAAGTACCCCGAGGNGAAGCCAGCCCTNGNAAACNTGGNTTTTGCTGCCAAG
JMFS134F04+ AAGACTCGCAAGTACACCGAGGTGAAGCCAGCCCTCGAAAACATGGTTTCTGCTGCCAAG
                      ____________________________________________________________
consensus AAGACTCGCAAGTACACCGAGGTGAAGCCAGCCCTCGAAAACATGGTTTTTGCTGCCAAG
 
. : . : . : . : . : . :
rJMSF019E06+ AAAATCCGCNCTCAACTTGCCAAGTGNGGTTNTTGAGNGNGCCCNGGCNTTTGAATNTTT
rJMSF047P22+ AAAATCCGCNCTCAACTTGCCAAGTGAGGTTNTTGAGCGTGCCCNGGCATTTGAATNTTT
rJMSF032M06+ AAAATCCGCACTCAACTTGCCAAGTGAGGTTNTTGAGCGTGCCCNGGCATTTGAATNTTT
rJMSF031K06+ AAAATNCGCNCTNAACTTGCCNAGNGNGGTTTTTGNGNGNGCCCNGGCNTTTGAATNTTT
rJMSF031P13+ AAAATCCGCNCTCAACTTGCCAAGTGAGGTTNTTGAGCGTGCCCNGGCNTTTGAATNTTT
rJMFF037I16+ AAAATCCGCNCTCAACTTGCCAAGTGAGGTTTTTGAGNGTGCCCAGGCATTTGAATNTTT
JMFN007O01- AAAATCCGCACTCAACTTGCCAAGTGAGGTTCTTGAGCGTGCCCAGGCATTTGAATCTTT
rJMFF026C09+ AAAATNCGCNCTCAANTTGCCAAGNGAGGTTNTTGAGNGTGCCCNGGCATTTGAATTTTT
JMFS134F04+ AAAATCCGCACTCAACTTGCCAAGTGAGGTTCTTGAGCGTGCCCAGGCATTTGAATCTTT
                      ____________________________________________________________
consensus AAAATCCGCACTCAACTTGCCAAGTGAGGTTCTTGAGCGTGCCCAGGCATTTGAATCTTT
 
. : . : . : . : . : . :
rJMSF019E06+ TCCNCCAAAACCTNTGTTTGNGNTGAAANTTTATTGTTTAGGTNTTTAGCTCCCTGAGCN
rJMSF047P22+ TCCNCCAAAACCTNTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCN
rJMSF032M06+ TCCNCCAAAACCTNTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCN
rJMSF031K06+ TCCCCCNAAACCTNTGTTTGNGANGAAANTTTATTGNTTAGGTNTTTAGCTCCCTGNGCC
rJMSF031P13+ TCCNCCAAAACCTNTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCN
rJMFF037I16+ TCCNCCAAAACCTTTGTTTGAGANGAAATTTTATTGTTTAGGTNTTTAGCTCCCTGAGCN
JMFN007O01- TCCACCAAAACCTCTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCA
rJMFF026C09+ TCCNCCAAAACCTNTGTTTGAGANGAAANTTTATTGTTTAGGTNTTTAGCTCCCTGAGCN
JMFS134F04+ TCCACCAAAACCTCTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCA
                      ____________________________________________________________
consensus TCCACCAAAACCTCTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCA
 
. : . : . : . : . : . :
rJMSF019E06+ CAAGCACNTTTGGATTTNTACTTTTTACCCNTTGTTTTCAATCTTTCCCNTTTNTTAAAG
rJMSF047P22+ CAAGCNCATTTGGATTTNTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTNTTAAAG
rJMSF032M06+ CAAGCNCNTTTGGATTTNTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTNTTAAAG
rJMSF031K06+ CNAGCNCNTTTGGNNTTTTACTTTTTACCCNTTGTTTTCAATNTTTCCCTTTTNTTAAAG
rJMSF031P13+ CAAGCNCATTTGGATTTNTACTTTTTACCCTTTGTTTTCAATNTTTCCCTTTTNTTAAAG
rJMFF037I16+ CAAGCACATTTGGATTTTTACTTTTTACCCTTTGTTTTCAATNTTTNCCTTTTTTTAAAG
rJMFF010M08+ CATTTGGATTTTTACTTTTCNCCCTTTGNTTTCAATCTTTCCCTTTTTTTAAAG
JMFN007O01- CAAGCACATTTGGATTTCTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTCTTAAAG
rJMFF026C09+ CAAGCACANTTGGATTTTTNCTTTTTNCCCTTTGTTTTCAATNTTTNCCTTTTTTTAAAG
JMFS134F04+ CAAGCACATTTGGATTTCTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTCTTAAAG
                      ____________________________________________________________
consensus CAAGCACATTTGGATTTTTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTTTTAAAG
 
. : . : . : . : . : . :
rJMSF019E06+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCT
rJMSF047P22+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMSF032M06+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTT
rJMSF031K06+ GA-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCT
rJMSF031P13+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF037I16+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTA
rJMFF010M08+ GGAAAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
JMFN007O01- GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF026C09+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF023G08+ A-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF038I10+ A-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
JMFS134F04+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
                      ____________________________________________________________
consensus GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
 
. : . : . : . : . : . :
rJMSF047P22+ CATTTGGGCACATAAACCCATTTT
rJMSF031P13+ CATTTGGGCACATAAACCCATTTTTCAT
rJMFF010M08+ CATTTGGGCACATAAACCCAT
JMFN007O01- CATTTGGGCACATAAACCCATTTTTCATT
rJMFF026C09+ CATTTGGGCACATAAACCCATTTTTCATTGCTTTCAA
rJMFF023G08+ CATTTGGGCACATAAACCCATTTTTCATTACTTTCAA
rJMFF038I10+ CATTTGGGCACATAAACCCATTTTTCATTACTTTCAA
JMFS134F04+ CATTTGGGCACATAAACCCATTTTTCATTGCTTTCAAAAAAAAAAAAAAAAAACTCGAGA
                      ____________________________________________________________
consensus CATTTGGGCACATAAACCCATTTTTCATTGCTTTCAAAAAAAAAAAAAAAAAACTCGAGA