| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010M08 | Sequence | 393 | 000707 (26) | gb|KJB80760.1| | 9e-82 | hypothetical protein B456_013G114400 [Gossypium raimondii] | 137 | 007693 (12) | |||
| JMFF023G08 | Sequence | 537 | 000707 (26) | gb|KDO54954.1| | 3e-96 | hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis] | 166 | 007693 (12) | |||
| JMFF026C09 | Sequence | 462 | 007693 (12) | gb|ABR25991.1| | 4e-17 | methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativ | |||||
| JMFF037I16 | Sequence | 511 | 000707 (26) | gb|KDO54954.1| | 5e-91 | hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis] | 372 | 007693 (12) | gb|ABR25991.1| | 2e-14 | methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativ |
| JMFF038I10 | Sequence | 425 | 000707 (26) | tpg|DAA47597.1| | 6e-61 | TPA: putative methionine synthase family protein [Zea mays] | 172 | 007693 (12) | |||
| JMFN007O01 | Sequence | 566 | 007693 (12) | gb|AAF26735.1| | 3e-65 | methionine synthase [Coffea arabica] | |||||
| JMFS134F04 | Sequence | 539 | 007693 (12) | gb|AAF26735.1| | 1e-51 | methionine synthase [Coffea arabica] | |||||
| JMSF019E06 | Sequence | 601 | 000707 (26) | tpg|DAA47596.1| | 2e-111 | TPA: putative methionine synthase family protein [Zea mays] | 681 | 007693 (12) | gb|AAF26735.1| | 6e-81 | methionine synthase [Coffea arabica] |
| JMSF031K06 | Sequence | 655 | 000707 (26) | gb|KJB80760.1| | 9e-121 | hypothetical protein B456_013G114400 [Gossypium raimondii] | 490 | 007693 (12) | emb|CAJ43618.1| | 4e-25 | methionine synthase [Plantago major] |
| JMSF031P13 | Sequence | 651 | 000707 (26) | gb|KJB80760.1| | 7e-120 | hypothetical protein B456_013G114400 [Gossypium raimondii] | 657 | 007693 (12) | gb|AAF26735.1| | 2e-66 | methionine synthase [Coffea arabica] |
| JMSF032M06 | Sequence | 657 | 000707 (26) | gb|KJB80760.1| | 2e-121 | hypothetical protein B456_013G114400 [Gossypium raimondii] | 595 | 007693 (12) | gb|AAF26735.1| | 6e-58 | methionine synthase [Coffea arabica] |
| JMSF047P22 | Sequence | 714 | 000707 (26) | gb|KJB80760.1| | 9e-135 | hypothetical protein B456_013G114400 [Gossypium raimondii] | 636 | 007693 (12) | gb|AAF26735.1| | 8e-57 | methionine synthase [Coffea arabica] |
This contig is upended
. : . : . : . : . : . :
rJMSF019E06+ TTGATGAAGCTGCTTTGAGAGAAGGTTTGCCTCTT
____________________________________________________________
consensus TTGATGAAGCTGCTTTGAGAGAAGGTTTGCCTCTT
. : . : . : . : . : . :
rJMSF019E06+ AGGAAGGCTGAGCATGCATTCTATTTGAACTGGGCTGTTCACTCATTCAGAATCACTAAC
rJMSF047P22+ CAGAATCACTAAC
rJMSF032M06+ TCAGAATCACTAAC
rJMSF031P13+ TTCAGAATCACTAAC
____________________________________________________________
consensus AGGAAGGCTGAGCATGCATTCTATTTGAACTGGGCTGTTCACTCATTCAGAATCACTAAC
. : . : . : . : . : . :
rJMSF019E06+ TGTGGCATCCAGGATACCACCCAGATTCACNCTCACATGTGNTACTCAAACTTCAATGAT
rJMSF047P22+ TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAT
rJMSF032M06+ TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAT
rJMSF031P13+ TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAG
____________________________________________________________
consensus TGTGGCATCCAGGATACCACCCAGATTCACACTCACATGTGCTACTCAAACTTCAATGAT
. : . : . : . : . : . :
rJMSF019E06+ ATCATCCNCTCCATCATTGACATGGANGCCGATGTTATCACAATTGAGAACTCCCGTTTT
rJMSF047P22+ ATCATCCNCTCCATCATTGACATGGATGCCGATGTTATCNCAATTGAGAACTCCCGTTNT
rJMSF032M06+ ATCATCCNCTCCATCATTGACATGGANGCCGATGTTATCNCAATTGAGAACTCCCGTTTT
rJMSF031K06+ GAACTCCCGTTTT
rJMSF031P13+ ATCATNCACTCCATCATTGACATGGANGCCGATGTTATCNCAATTGAGAACTCCCGTTTT
JMFN007O01- TCCACTCCATCATTGACATGGATGCCGATGTTATCACAATTGAGAACTCCCGTTCT
____________________________________________________________
consensus ATCATCCACTCCATCATTGACATGGATGCCGATGTTATCACAATTGAGAACTCCCGTTTT
. : . : . : . : . : . :
rJMSF019E06+ GATGAGAAGNTTNTTTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF047P22+ GATGAGAAGNTTNTNTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF032M06+ GATGNGAAGNTTNTNTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF031K06+ GNTGNGAAGNTTNTTTCAGTTTTCCGNGAGGGNGTGAAGTATGGTGCTGGAATTGGCCCC
rJMSF031P13+ GATGNGAAGNTTNTNTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
JMFN007O01- GATGAGAAGCTTCTCTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
JMFS134F04+ GATGAGAAGCTTCTCTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
____________________________________________________________
consensus GATGAGAAGCTTCTCTCAGTTTTCCGTGAGGGTGTGAAGTATGGTGCTGGAATTGGCCCC
. : . : . : . : . : . :
rJMSF019E06+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGNTTGCNGATAGAATC
rJMSF047P22+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGATTGCAGATAGAATC
rJMSF032M06+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGATTGCNGATAGAATC
rJMSF031K06+ GGNGTTTATGACATNCNCTTTCCCNGAATACCGTNCCCTGAAGNGNTTGCNGATAGAATC
rJMSF031P13+ GGNGTNTATGACATCCNCTNTCCCAGAATACCGTCCNCTGAAGNGATTGCAGATAGAATC
rJMFF037I16+ GAAGAGATTGCAGATAGNATN
JMFN007O01- GGTGTCTATGACATCCACTCTCCCAGAATACCGTCCACTGAAGAGATTGCAGATAGAATC
rJMFF026C09+ TCCCAGAATNCCGTCCANTGAAGAGATTGCAGATNGAATC
JMFS134F04+ GGTGTCTATGACATCCACTCTCCCAGAATACCGTCCACTGAAGAGATTGCAGATAGAATC
____________________________________________________________
consensus GGTGTCTATGACATCCACTCTCCCAGAATACCGTCCACTGAAGAGATTGCAGATAGAATC
. : . : . : . : . : . :
rJMSF019E06+ AACAAGATGCTTGCAGTTNTTGACNCCAACATNTTGTGGGTGAACCCCGACTGTGGTTTG
rJMSF047P22+ AACNAGATGCTTGCAGTTNTTGACACCAACATNTTGNGGGTGAACCCCGNCTGTGGTNTG
rJMSF032M06+ AACNAGATGCTTGCAGTTNTTGACNCCAACATNTTGTGGGTGAACCCCGNCTGTGGTTTG
rJMSF031K06+ AACNAGATGNTTGCAGTTNTTGNCNCCAACATTTTGNGGGNGAACCCCGNCTGTGGTTTG
rJMSF031P13+ AACAAGATGCTTGCAGTTNTTGACNCCAACATNTTGNGGGTGAACCCCGNCTGTGGTNTG
rJMFF037I16+ AACNAGATNCTTGCAGTTTTTGACNCCAACATTTTGTGGGNGAACCCCGGCTGNGGTTTG
JMFN007O01- AACAAGATGCTTGCAGTTCTTGACACCAACATCTTGTGGGTGAACCCCGACTGTGGTCTG
rJMFF026C09+ AACAAGANGCTTGCAGTTTTTNATNCCAACATTTTGTGGGTGAACCCCGNNTGNGGTTTG
JMFS134F04+ AACAAGATGCTTGCAGTTCTTGACACCAACATCTTGTGGGTGAACCCCGACTGTGGTCTG
____________________________________________________________
consensus AACAAGATGCTTGCAGTTCTTGACACCAACATTTTGTGGGTGAACCCCGACTGTGGTTTG
. : . : . : . : . : . :
rJMSF019E06+ AAGACTNGCAAGTACNCCGAGGNGAAGCCAGCCCTNGAAAACATGGTTTTTGCTGCCAAG
rJMSF047P22+ AAGACTNGCAAGTACNCCGAGGNGAAGCCAGCCCTNGAAAACATGGTTTNTGNTGCCAAG
rJMSF032M06+ AAGACTNGCAAGTACNCCGAGGNGAAGCCAGCCCTNGAAAACNTGGTTTNTGNTGCCAAG
rJMSF031K06+ AAGNCTNGCAAGTACNCCGNGGNGAAGCCNGCCCTNGAAAACNTGGNTTTTGNTGCCNAG
rJMSF031P13+ AAGNCTNGCAAGTACNCCGAGGNGAAGCCNGCCCTNGAAAACATGGTTTTTGNTGCCAAG
rJMFF037I16+ AAGACTNGCAAGTNCNCCGAGGTGAAGCCAGCCCTTGNAAACATGGTTTTTGCTGCCAAG
JMFN007O01- AAGACTCGCAAGTACACCGAGGTGAAGCCAGCCCTCGAAAACATGGTTTCTGCTGCCAAG
rJMFF026C09+ AAGACTCGCAAGTACCCCGAGGNGAAGCCAGCCCTNGNAAACNTGGNTTTTGCTGCCAAG
JMFS134F04+ AAGACTCGCAAGTACACCGAGGTGAAGCCAGCCCTCGAAAACATGGTTTCTGCTGCCAAG
____________________________________________________________
consensus AAGACTCGCAAGTACACCGAGGTGAAGCCAGCCCTCGAAAACATGGTTTTTGCTGCCAAG
. : . : . : . : . : . :
rJMSF019E06+ AAAATCCGCNCTCAACTTGCCAAGTGNGGTTNTTGAGNGNGCCCNGGCNTTTGAATNTTT
rJMSF047P22+ AAAATCCGCNCTCAACTTGCCAAGTGAGGTTNTTGAGCGTGCCCNGGCATTTGAATNTTT
rJMSF032M06+ AAAATCCGCACTCAACTTGCCAAGTGAGGTTNTTGAGCGTGCCCNGGCATTTGAATNTTT
rJMSF031K06+ AAAATNCGCNCTNAACTTGCCNAGNGNGGTTTTTGNGNGNGCCCNGGCNTTTGAATNTTT
rJMSF031P13+ AAAATCCGCNCTCAACTTGCCAAGTGAGGTTNTTGAGCGTGCCCNGGCNTTTGAATNTTT
rJMFF037I16+ AAAATCCGCNCTCAACTTGCCAAGTGAGGTTTTTGAGNGTGCCCAGGCATTTGAATNTTT
JMFN007O01- AAAATCCGCACTCAACTTGCCAAGTGAGGTTCTTGAGCGTGCCCAGGCATTTGAATCTTT
rJMFF026C09+ AAAATNCGCNCTCAANTTGCCAAGNGAGGTTNTTGAGNGTGCCCNGGCATTTGAATTTTT
JMFS134F04+ AAAATCCGCACTCAACTTGCCAAGTGAGGTTCTTGAGCGTGCCCAGGCATTTGAATCTTT
____________________________________________________________
consensus AAAATCCGCACTCAACTTGCCAAGTGAGGTTCTTGAGCGTGCCCAGGCATTTGAATCTTT
. : . : . : . : . : . :
rJMSF019E06+ TCCNCCAAAACCTNTGTTTGNGNTGAAANTTTATTGTTTAGGTNTTTAGCTCCCTGAGCN
rJMSF047P22+ TCCNCCAAAACCTNTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCN
rJMSF032M06+ TCCNCCAAAACCTNTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCN
rJMSF031K06+ TCCCCCNAAACCTNTGTTTGNGANGAAANTTTATTGNTTAGGTNTTTAGCTCCCTGNGCC
rJMSF031P13+ TCCNCCAAAACCTNTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCN
rJMFF037I16+ TCCNCCAAAACCTTTGTTTGAGANGAAATTTTATTGTTTAGGTNTTTAGCTCCCTGAGCN
JMFN007O01- TCCACCAAAACCTCTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCA
rJMFF026C09+ TCCNCCAAAACCTNTGTTTGAGANGAAANTTTATTGTTTAGGTNTTTAGCTCCCTGAGCN
JMFS134F04+ TCCACCAAAACCTCTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCA
____________________________________________________________
consensus TCCACCAAAACCTCTGTTTGAGATGAAATTTTATTGTTTAGGTCTTTAGCTCCCTGAGCA
. : . : . : . : . : . :
rJMSF019E06+ CAAGCACNTTTGGATTTNTACTTTTTACCCNTTGTTTTCAATCTTTCCCNTTTNTTAAAG
rJMSF047P22+ CAAGCNCATTTGGATTTNTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTNTTAAAG
rJMSF032M06+ CAAGCNCNTTTGGATTTNTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTNTTAAAG
rJMSF031K06+ CNAGCNCNTTTGGNNTTTTACTTTTTACCCNTTGTTTTCAATNTTTCCCTTTTNTTAAAG
rJMSF031P13+ CAAGCNCATTTGGATTTNTACTTTTTACCCTTTGTTTTCAATNTTTCCCTTTTNTTAAAG
rJMFF037I16+ CAAGCACATTTGGATTTTTACTTTTTACCCTTTGTTTTCAATNTTTNCCTTTTTTTAAAG
rJMFF010M08+ CATTTGGATTTTTACTTTTCNCCCTTTGNTTTCAATCTTTCCCTTTTTTTAAAG
JMFN007O01- CAAGCACATTTGGATTTCTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTCTTAAAG
rJMFF026C09+ CAAGCACANTTGGATTTTTNCTTTTTNCCCTTTGTTTTCAATNTTTNCCTTTTTTTAAAG
JMFS134F04+ CAAGCACATTTGGATTTCTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTCTTAAAG
____________________________________________________________
consensus CAAGCACATTTGGATTTTTACTTTTTACCCTTTGTTTTCAATCTTTCCCTTTTTTTAAAG
. : . : . : . : . : . :
rJMSF019E06+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCT
rJMSF047P22+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMSF032M06+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTT
rJMSF031K06+ GA-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCT
rJMSF031P13+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF037I16+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTA
rJMFF010M08+ GGAAAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
JMFN007O01- GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF026C09+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF023G08+ A-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
rJMFF038I10+ A-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
JMFS134F04+ GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
____________________________________________________________
consensus GG-AAAAAAAAAACAAAGAAAATTATATCATCCTGTAAGTTTTGGCTTGTTATCTGAATG
. : . : . : . : . : . :
rJMSF047P22+ CATTTGGGCACATAAACCCATTTT
rJMSF031P13+ CATTTGGGCACATAAACCCATTTTTCAT
rJMFF010M08+ CATTTGGGCACATAAACCCAT
JMFN007O01- CATTTGGGCACATAAACCCATTTTTCATT
rJMFF026C09+ CATTTGGGCACATAAACCCATTTTTCATTGCTTTCAA
rJMFF023G08+ CATTTGGGCACATAAACCCATTTTTCATTACTTTCAA
rJMFF038I10+ CATTTGGGCACATAAACCCATTTTTCATTACTTTCAA
JMFS134F04+ CATTTGGGCACATAAACCCATTTTTCATTGCTTTCAAAAAAAAAAAAAAAAAACTCGAGA
____________________________________________________________
consensus CATTTGGGCACATAAACCCATTTTTCATTGCTTTCAAAAAAAAAAAAAAAAAACTCGAGA