| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025E13 | Sequence | 560 | 007687 (10) | gb|ACL00957.1| | 5e-54 | sucrose synthase [Ipomoea batatas] | 709 | 006187 (38) | ref|XP_009625446.1| | 4e-75 | PREDICTED: sucrose synthase [Nicotiana tomentosiformis] |
| JMFF029B06 | Sequence | 572 | 007687 (10) | gb|ACL00957.1| | 2e-66 | sucrose synthase [Ipomoea batatas] | 763 | 006187 (38) | ref|XP_009625446.1| | 3e-100 | PREDICTED: sucrose synthase [Nicotiana tomentosiformis] |
| JMFF047D13 | Sequence | 645 | 007687 (10) | gb|ACL00957.1| | 1e-84 | sucrose synthase [Ipomoea batatas] | 611 | 006187 (38) | ref|XP_009625446.1| | 8e-52 | PREDICTED: sucrose synthase [Nicotiana tomentosiformis] |
| JMFS005F01 | Sequence | 336 | 007687 (10) | ||||||||
| JMFS007D07 | Sequence | 637 | 007687 (10) | gb|ACL00957.1| | 5e-47 | sucrose synthase [Ipomoea batatas] | |||||
| JMFS035F08 | Sequence | 594 | 007687 (10) | gb|ACL00957.1| | 6e-99 | sucrose synthase [Ipomoea batatas] | |||||
| JMFS124A04 | Sequence | 577 | 007687 (10) | gb|ACL00957.1| | 2e-82 | sucrose synthase [Ipomoea batatas] | |||||
| JMFS124H11 | Sequence | 576 | 007687 (10) | gb|ACL00957.1| | 3e-79 | sucrose synthase [Ipomoea batatas] | |||||
| JMFS129A05 | Sequence | 448 | 007687 (10) | ||||||||
| JMFS167A05 | Sequence | 616 | 007687 (10) | gb|ACL00957.1| | 3e-89 | sucrose synthase [Ipomoea batatas] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS035F08+ TTCCAATGGACTTGGTAAGGGTTGGCTTGGGAAAGGATGCAGTAAACGGCTC
JMFS167A05+ TGCAGTAAACGGCTC
JMFF047D13+ CTC
____________________________________________________________
consensus TTCCAATGGACTTGGTAAGGGTTGGCTTGGGAAAGGATGCAGTAAACGGCTC
. : . : . : . : . : . :
JMFS124H11+ ACCATTGGCAGGTCCATCGACCAGCTCTTCTTTGAA
JMFS035F08+ AAAATCCAATTCAAGAACGAAGTTACCATTGGCAGGTCCATCGACCAGCTCTTCTTTGAA
JMFS167A05+ AAAATCCAATTCAAGAACGAAGTTACCATTGGCAGGTCCATCGACCAGCTCTTCTTTGAA
JMFS124A04+ TCAAGAACGAAGTTACCATTGGCAGGTCCATCGACCAGCTCTTCTTTGAA
JMFF047D13+ AAAATGCAATTCAAGAACGAAGTTACCATTGGCAGGTCCATCGACCAGCTCTTCTTTGAA
____________________________________________________________
consensus AAAATCCAATTCAAGAACGAAGTTACCATTGGCAGGTCCATCGACCAGCTCTTCTTTGAA
. : . : . : . : . : . :
JMFS124H11+ CTGCAGATACTCGGGGACAGTAAGCTCCTCAACAGCTAAAGCATGGACATTCACTCTCAC
JMFS035F08+ CTGCAGATACTCGGGGACAGTAAGCTCCTCAACAGCTAAAGCATGGACATTCACTCTCAC
JMFS167A05+ CTGCAGATACTCGGGGACAGTAAGCTCCTCAACAGCTAAAGCATGGACATTCACTCTCAC
JMFS124A04+ CTGCAGATACTCGGGGACAGTAAGCTCCTCAACAGCTAAAGCATGGACATTCACTCTCAC
JMFF029B06+ TCGGGGACAGTAAGCTCCTCAACAGNTAAAGCATGGACATTCACTCTCAC
JMFF047D13+ CTGCAGATACTCGGGGACAGTAAGCTCCTCAACAGCTAAAGCATGGACATTCACTCTCAC
____________________________________________________________
consensus CTGCAGATACTCGGGGACAGTAAGCTCCTCAACAGCTAAAGCATGGACATTCACTCTCAC
. : . : . : . : . : . :
JMFS124H11+ ATATTCCCAGACACCGGGCCTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
JMFS035F08+ ATATTCCCAGACACCGGGCCTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
JMFS167A05+ ATATTCCCAGACACCGGGCCTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
JMFS124A04+ ATATTCCCAGACACCGGGCCTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
JMFF029B06+ ATATTCCCAGACACCGGGCCTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
JMFF047D13+ ATATTCCCAGACACCGGGCCTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
JMFF025E13+ TTCCCAGACACCGGGCNTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
JMFS007D07+ GCAAGCGCAACCCATGGTGGCAGAACGAT
____________________________________________________________
consensus ATATTCCCAGACACCGGGCCTCAGACGGATAGCAAGCGCAACCCATGGTGGCAGAACGAT
. : . : . : . : . : . :
JMFS124H11+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
JMFS035F08+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
JMFS167A05+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
JMFS124A04+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
JMFF029B06+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
JMFF047D13+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
JMFF025E13+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
JMFS007D07+ CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
____________________________________________________________
consensus CGCTTCCTGTGTGGATTTCAAGACTTGCTGAAAGGCGTGATCGTTCAGCTTCTCTTGGTC
. : . : . : . : . : . :
JMFS124H11+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
JMFS035F08+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
JMFS167A05+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
JMFS124A04+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
JMFF029B06+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
JMFF047D13+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
JMFF025E13+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
JMFS007D07+ CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
____________________________________________________________
consensus CTCTTTGCAGATCGCTTCAAACTCCGCGAGGAGCTGGTGTGGCTTGAGGATTCCTTTCCC
. : . : . : . : . : . :
JMFS124H11+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
JMFS035F08+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
JMFS167A05+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
JMFS124A04+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
JMFF029B06+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
JMFF047D13+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
JMFF025E13+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
JMFS007D07+ GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
____________________________________________________________
consensus GTGGCTTTCGATTTTCGACATAAACAGCAGAATCTCATTGCGGTGGGCAGTCAGCGTGGC
. : . : . : . : . : . :
JMFS124H11+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
JMFS035F08+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
JMFS167A05+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
JMFS124A04+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
JMFF029B06+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
JMFF047D13+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
JMFF025E13+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
JMFS007D07+ ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
____________________________________________________________
consensus ATCCAGGCGCTCCCGGAGGCTGTGAACACGAGTCAGAACACGTTCAGCCATGGCAGTCAA
. : . : . : . : . : . :
JMFS124H11+ TGATCAAGAGCCTCAGCT
JMFS035F08+ TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
JMFS167A05+ TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
JMFS124A04+ TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
JMFF029B06+ TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
JMFF047D13+ TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
JMFF025E13+ TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
JMFS005F01+ AGTGTAATAAGCAGGAGGAATACATGTT
JMFS007D07+ TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
JMFS129A05+ AGTGTAATAAGCAGGAGGAGTACATGTT
____________________________________________________________
consensus TGATCAAGAGCCTCAGCTGCAAGACAAACAACAGTGTAATAAGCAGGAGGAATACATGTT
. : . : . : . : . : . :
JMFS035F08+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFS167A05+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFS124A04+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFF029B06+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFF047D13+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFF025E13+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFS005F01+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFS007D07+ TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
JMFS129A05+ TGGTTTATCCAACAAANACAACCTAAACTANNCANATACCAACCAACCCCCCAAGCAATC
____________________________________________________________
consensus TGGTTTATCCAACAAAGACAACCTAAACTAGACAGATACCAACCAACCCCCCAAGCAATC
. : . : . : . : . : . :
JMFS035F08+ TA
JMFS167A05+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
JMFS124A04+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAA
JMFF029B06+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
JMFF047D13+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
JMFF025E13+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
JMFS005F01+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
JMFS007D07+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
JMFS129A05+ TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
____________________________________________________________
consensus TAGTAAACTAGGATCACCAAAATTTCAAATCTAGCAACCTAATATAATATAGTACTACAT
. : . : . : . : . : . :
JMFS167A05+ C
JMFF029B06+ CCCTAACACAACCACCAAACATGATCACATTTATTAGATCTT
JMFF047D13+ CCCTAACACAACCACCAAACATGATCACATTTATTAGATCTT
JMFF025E13+ CCCTAACACAACCACCAAACATGATCACATTTATTAGATCTTATCTTACTCAACCTATAA
JMFS005F01+ CCCTAACACAACCACCAAACATGATCACATTTATTAGATCTTATCTTACTCAACCTATAA
JMFS007D07+ CCCTAACACAACCACCAAACATGATCACATTTATTAGATCTTATCTTACTCAACCTATAA
JMFS129A05+ CCCTAACACAACCACCAAACATGATCACATTTATTAGATCTTATCTTACTCAACCTATAA
____________________________________________________________
consensus CCCTAACACAACCACCAAACATGATCACATTTATTAGATCTTATCTTACTCAACCTATAA
. : . : . : . : . : . :
JMFF025E13+ CTACAGGCTAAAAGAACAACTAT
JMFS005F01+ CTACAGGCTAAAAGAACAACTATGCGTGACAACCAAGAATCCTCACATCATAAAATAGTA
JMFS007D07+ CTACAGGCTAAAAGAACAACTATGCGTGACAACCAAGAATCCTCACATCATAAAATAGTA
JMFS129A05+ CTACAGGCTAAAAGAACAACTATGCGTGACAACCAAGAATCCTCACATCATAAAATAGTA
____________________________________________________________
consensus CTACAGGCTAAAAGAACAACTATGCGTGACAACCAAGAATCCTCACATCATAAAATAGTA
. : . : . : . : . : . :
JMFS005F01+ ACACCTGCCCCTGCCTAAACCAAAGTCTAAAAGCAACTAACTATGATTAGCCCTCTCTTT
JMFS007D07+ ACACCTGCCCCTGCCTAAACCAAAGTCTAAAAGCAACTAACTATGATTAGCCCTCTCTTT
JMFS129A05+ ACACCTGCCCCTGCCTAAACCAAAGTCTAAAAGCAACTAACTATGATTAGCCCTCTCTTT
____________________________________________________________
consensus ACACCTGCCCCTGCCTAAACCAAAGTCTAAAAGCAACTAACTATGATTAGCCCTCTCTTT
. : . : . : . : . : . :
JMFS005F01+ TAAACTTC
JMFS007D07+ TAAACTTC
JMFS129A05+ TAAACTTCTTAGCATAATTACTAATAATGATCATTATCTTTTAAGTGACGAAAAAAACAT
____________________________________________________________
consensus TAAACTTCTTAGCATAATTACTAATAATGATCATTATCTTTTAAGTGACGAAAAAAACAT
. : . : . : . : . : . :
JMFS129A05+ GCAGCCACTGCTCGAAGGTGTGCACCGCCTAAAACCATCCCTATCCTAGGAGACAAAGGA
____________________________________________________________
consensus GCAGCCACTGCTCGAAGGTGTGCACCGCCTAAAACCATCCCTATCCTAGGAGACAAAGGA