Contig 007683:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS126G08Sequence613007683 (2)ref|XP_011093757.1|6e-112PREDICTED: LOW QUALITY PROTEIN: cyclin-L1-1 [Sesamum indicum]
JMFS126G09Sequence605007683 (2)ref|XP_011093757.1|1e-111PREDICTED: LOW QUALITY PROTEIN: cyclin-L1-1 [Sesamum indicum]

Alignment

This contig is upended


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JMFS126G09+                                                                  GCGCA
JMFS126G08+                                                          AATGTTGTGCGCA
                      ____________________________________________________________
consensus                                                            AATGTTGTGCGCA
 
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JMFS126G09+           AACTGTCATTTGCAAGATTCCATGCTTCCTGTCTCAATTCATGAGGCATCTCAAGAATTG
JMFS126G08+           AACTGTCATNTGCAAGATTCCATGCTTCCTGTCTCAATTCATGAGGCATCTCAAGAATTG
                      ____________________________________________________________
consensus             AACTGTCATTTGCAAGATTCCATGCTTCCTGTCTCAATTCATGAGGCATCTCAAGAATTG
 
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JMFS126G09+           TAAGATAAATTGATATAAATTTATGGGGGTGTTCAACATGGCAGATGACGCCCATCTCTT
JMFS126G08+           TAAGATAAATTGATATAAATTTATGGGGGTGTTCAACATGGCAGATGACGCCCATCTCTT
                      ____________________________________________________________
consensus             TAAGATAAATTGATATAAATTTATGGGGGTGTTCAACATGGCAGATGACGCCCATCTCTT
 
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JMFS126G09+           TTTGAAGACTCCTTTTTGTTTTAAATAAATCTGCCTTCAGATCAACATATTTCTTCGAAG
JMFS126G08+           TTTGAAGACTCCTTTTTGTTTTAAATAAATCTGCCTTCAGATCAACATATTTCTTCGAAG
                      ____________________________________________________________
consensus             TTTGAAGACTCCTTTTTGTTTTAAATAAATCTGCCTTCAGATCAACATATTTCTTCGAAG
 
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JMFS126G09+           AAGTATCCAAATGTTCTATGGGTAAATTCTCCCTCCGACATTCCATTCTGTGGAAAACAA
JMFS126G08+           AAGTATCCAAATGTTCTATGGGTAAATTCTCCCTCCGACATTCCATTCTGTGGAAAACAA
                      ____________________________________________________________
consensus             AAGTATCCAAATGTTCTATGGGTAAATTCTCCCTCCGACATTCCATTCTGTGGAAAACAA
 
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JMFS126G09+           TGAGGACTCGCCCGGCTTTTCTGGGACAGTGTTCAAGTTTTGAGGCAAGCCACACACAAC
JMFS126G08+           TGAGGACTCGCCCGGCTTTTCTGGGACAGTGTTCAAGTTTTGAGGCAAGCCACACACAAC
                      ____________________________________________________________
consensus             TGAGGACTCGCCCGGCTTTTCTGGGACAGTGTTCAAGTTTTGAGGCAAGCCACACACAAC
 
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JMFS126G09+           TAGCAGCAACTATCTTCACATTAAAATGAGAAAACGACTTCTTGCAATAAAAACGGTGGA
JMFS126G08+           TAGCAGCAACTATCTTCACATTAAAATGAGAAAACGACTTCTTGCAATAAAAACGGTGGA
                      ____________________________________________________________
consensus             TAGCAGCAACTATCTTCACATTAAAATGAGAAAACGACTTCTTGCAATAAAAACGGTGGA
 
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JMFS126G09+           ATAGTACTTGACCTGTGGCCATAACAGCTTGAGGTAGTTTCAATAAAATTCCACTTTCTT
JMFS126G08+           ATAGTACTTGACCTGTGGCCATAACAGCTTGAGGTAGTTTCAATAAAATTCCACTTTCTT
                      ____________________________________________________________
consensus             ATAGTACTTGACCTGTGGCCATAACAGCTTGAGGTAGTTTCAATAAAATTCCACTTTCTT
 
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JMFS126G09+           GGATAAGATCACAGCCATAGATTCGAAGGGTTCTCTCAGTGGCTTCATCTATTCCATATC
JMFS126G08+           GGATAAGATCACAGCCATAGATTCGAAGGGTTCTCTCAGTGGCTTCATCTATTCCATATC
                      ____________________________________________________________
consensus             GGATAAGATCACAGCCATAGATTCGAAGGGTTCTCTCAGTGGCTTCATCTATTCCATATC
 
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JMFS126G09+           TCCTAGAAGGTGAGTTCTTAAGCTGCTCATCTGTTAGGTAAAATGTGTCAACTGCTGTGT
JMFS126G08+           TCCTAGAAGGTGAGTTCTTAAGCTGCTCATCTGTTAGGTAAAATGTGTCAACTGCTGTGT
                      ____________________________________________________________
consensus             TCCTAGAAGGTGAGTTCTTAAGCTGCTCATCTGTTAGGTAAAATGTGTCAACTGCTGTGT
 
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JMFS126G09+           GAATCATAGTTGGTCAGGAGTTCAAGACGTCTATCAACCTCCAGCACTCCAGTGGTGTTG
JMFS126G08+           GAATCATAGTTGGTCAGGAGTTCAAGACGTCTATCAACCTCCAGCACTCCAGTGGTGTTG
                      ____________________________________________________________
consensus             GAATCATAGTTGGTCAGGAGTTCAAGACGTCTATCAACCTCCAGCACTCCAGTGGTGTTG